An experimental and theoretical study on the substituent effect of the permanganate oxidation of styrenes

The kinetic data obtained for the cycloadditions of the permanganate ion to a series of styrene derivatives in dichloromethane solution in the presence of a quaternary ammonium ion were examined with two theoretical approaches, on the assumption that the reactions proceed via a concerted [3 + 2] mechanism. The semi-quantitative frontier molecular orbital analysis of the kinetic data shows a linear free energy relationship with better correlation than the Hammett plot with a values when the point for p-NO2 group is omitted. Further examination of the results of the FMO analysis reveals that the deviation of the point for p-nitrostyrene is attributed to the transition structure being more reactant-like than that of the other derivatives. The plot of log k2 vs. -deltaG++ calculated by the density functional theory (Becke3LYP) follows a straight line with the desired correlation for all the substituents. A marked tendency was observed for the MO calculations to underestimate the deltaG++ value for electron-withdrawing substituents when the calculation was carried out excluding the quaternary ammonium ion. This inconsistency was much improved by the calculations incorporating the quaternary ammonium ion. The actual values of deltaG++ obtained from the Eyring analysis are in good agreement with those calculated at the B3LYP/6-311 +G(d,p)//B3LYP/ LanL2DZ level.     

Syntheses of some 2-hydroxypyrazine 1-oxides

A series of 2-hydroxypyrazine 1-oxides were prepared from the corresponding chloropyrazines by two methods, including oxidation processes in satisfactory yields. The treatment of 2,3-diphenylpyrazine 1,4-dioxide ( 6 ) led to 2,3-dichloro-5,6-diphenylpyrazine ( 7 ) and 2-chloro-5,6-diphenylpyrazine 1-oxide ( 8 ), and the latter was converted to 5,6-diphenyl-2-hydroxypyrazine 1-oxide ( 9 ) by an alkaline hydrolysis.     

Combined NMR and quantum chemical studies on the interaction between trehalose and dienes relevant to the antioxidant function of trehalose

In a previous study (Oku, K.; Watanabe, H.; Kubota, M.; Fukuda, S.; Kurimoto, M.; Tujisaka, Y.; Komori, M.; Inoue, Y.; Sakurai, M. J. Am. Chem. Soc. 2003, 125, 12739), we investigated the mechanism of the antioxidant function of trehalose against unsaturated fatty acids (UFAs) and revealed that the key factor relevant to the function is the formation of OH...pi and CH...O hydrogen bonds between trehalose and the cis double bonds of the UFA. Here, we investigate whether such intriguing interactions also occur between this sugar and cis double bonds in other unsaturated compounds. For this purpose, we selected various diene compounds (1,3-butadiene, 1,3-pentadiene, 1,4-pentadiene, and 2,5-heptadiene) as interaction partners. All NMR experiments performed, including 1H-1H NOESY measurements, indicated that trehalose selectively interacts with the cis-olefin proton pair in the above diene with a 1:1 stoichiometry, and the C-3 (C-3') and C-6' (C-6) sites of the sugar are responsible for the interaction. Similar interactions were not observed for the mixtures of the diene and other saccharides (neotrehalose, kojibiose, nigerose, maltose, isomaltose, sucrose, maltitol, and sorbitol). Quantum chemical calculations revealed that the OH-3 and OH-6 groups bind to the olefin double bonds of the diene through OH...pi and CH...O types of hydrogen bonds, respectively, and the stabilization energy of the resulting complex is 5-6 kcal mol(-1). These results strongly support the above NMR results. Finally, the activation energies were calculated for the hydrogen abstraction reactions from the activated methylene group of heptadiene. In particular, when the reaction was initiated by a methyl radical, the activation energy was only 10 kcal mol(-1) for the free heptadiene, but on complexation with trehalose it drastically increased to ca. 40 kcal mol(-1). This indicates that trehalose has a significant depression effect on the oxidation of the diene compounds. These results strongly support the antioxidant mechanism deduced in the previous study and indicate that the formation of unique multiple hydrogen bonds between trehalose and cis-olefin bonds is rather a general event not confined to the case of UFA.     

Preparation and properties of metallacyclobutanes of nickel and palladium

Bis(phosphine)-3,3-dimethylnickela- and palladacyclobutanes have been prepared by intramolecular C-H insertion reaction of the corresponding dineopentyl metal complexes. Nickelacyclobutane complexes decompose when heated thereby undergoing competitive carbon-carbon bond cleavage to give isobutene and ethylene, with reductive elimination affording 1,1-dimethylcyclopropane and skeletal isomeri-zation of the metallacyclic ring yielding 3-methyl-1-butene, whereas the palladium analog gave no significant amounts of CC bond cleavage products.Added phos-phine was seen to have an effect on CC bond scission of nickelacyclobutane complexes. Nickelacyclobutane complexes in solution are thought to be in equilibrium with olefin-coordinated nickel-carbene complex on the basis of available experimental evidence from hydrogenolysis, carbene-trap reactions with olefins and reaction with carbon monoxide     

Synthesis of pyrazolo[3,4-d]pyrimidine derivatives using ketene dithioacetals

The cyclization of 5-amino-3-methylthiopyrazole-4-carbonitriles or 4-carboxamides 3a-j , which were prepared by the reaction of ketene dithioacetals 1a,b [1a : bis(methylthiomethylenemalononitrile; 1b : bis(methylthio)methylenecyanoacetamide] with hydrazines (hydrazine hydrate, phenylhydrazine, p-chlorophenylhydrazine, p-nitrophenylhydrazine), with formamide or carbon disulfide proceeded to give the corresponding 4-amino- or 4-hydroxy-3-methylthiopyrazolo[3,4-d]pyrimidines 6a-h in good yields. 3-Aminopyrazolo[3,4-d]pyrimidine derivatives 6i-1 were also obtained by the application of the cyclization reaction of 3,5-diaminopyrazoles with formamide.     

Quantitative analysis of protein adsorption on a planar surface by Fourier transform infrared spectroscopy: lysozyme adsorbed on hydrophobic silicon-containing polymer

The adsorption of hen egg white lysozyme onto a solid polytris(trimethylsiloxy)silylstyrene (pTSS) surface from a D(2)O solution at pD 7 containing 100 mM NaCl and 10 mM sodium deuterated phosphate was monitored at 25 degrees C by Fourier transform infrared spectroscopy using the attenuated total reflection (ATR) method. The infrared spectrum attributed to only the adsorbed lysozyme was derived from the observed spectrum, and the amount of adsorbed lysozyme was determined as a function of time and lysozyme concentration. The kinetics of adsorption could be decomposed into two components, one of which was a process with a time constant of larger than 4 h(-1) and the other was a process with one of about 0.1 h(-1). These spectra showed that the lysozyme adsorbed in the faster process had a higher beta-structure content than the dissolved lysozyme. It was also found that the slower adsorption induced some conformational change in the lysozyme adsorbed in the faster process and/or that adsorbed in the slower process. After adsorption for 24 h, the pTSS surface was rinsed out with lysozyme-free solution. The resultant spectra of the surface indicated that the lysozyme adsorbed in the faster process was bound irreversibly on the surface and was changed to a conformer with a higher beta-structure content during the slower process. The experimental procedures and the theoretical applications for such a quantitative analysis in the ATR spectroscopic method are presented in detail.     

Practical synthesis of d-[1-C]mannose, l-[1-C] and l-[6-C]fucose

The chemical synthesis of ¹³C-labeled mannose and fucose is important for the preparation of molecular probes used in the conformational study of the oligosaccharide portions of glycoproteins. A new method for the synthesis of the title [1-¹³C]-labeled compounds via the corresponding olefin compounds, which are in turn derived from d-mannitol or l-arabinose by efficient introduction of ¹³C, by the Wittig reaction using Ph₃P¹³CH₃I and n-BuLi, is described. The introduction of ¹³CH₃I to produce the [1-¹³C]- and [6-¹³C]-labeled compounds was accomplished in 62%, 56%, and 71% yields, respectively. All mannose and fucose protons, from H-1 to H-6, were observed by the HMQC-TOCSY technique using 1:1 mixtures of [1-¹³C]- and [6-¹³C]-labeled compounds.     

SmI2-induced reductive cyclization of optically active β-alkoxyvinyl sulfoxides with aldehyde

SmI₂-induced reductive cyclization of optically active (E)- and (Z)-β-alkoxyvinyl sulfoxides with aldehyde was developed for the construction of several stereoisomers of tetrahydropyran derivatives.     

A practical procedure for the synthesis of multifunctional aldehydes through the Fukuyama reduction and elucidation of the reaction site and mechanism

A highly efficient heterogeneous Pd/C catalyst D1 was found to effect the reduction of thiol esters 1 to the corresponding aldehydes 2 with such a low catalyst loading as 0.5-1.0 mol %. The chemical properties of the Pd/C catalysts together with the XRF analysis reveal that the reduction is most likely to proceed on the solid surface of the Pd/C catalyst rather than in the solution phase outside the pores. A reaction mechanism through oxidative addition of Pd to the thiol esters 1 was postulated by detection of the oxidative addition intermediate by React IR analysis. A practical purification of 2 was accomplished by conversion to water-soluble bisulfite adducts 7.     

Synthesis of 4,8-anhydro-d-glycero-d-ido-nonanitol 1,6,7-trisphosphate as a novel IP3 receptor ligand using a stereoselective radical cyclization reaction based on a conformational restriction strategy

4,8-Anhydro-d-glycero-d-ido-nonanitol 1,6,7-trisphosphate (9), designed as a novel IP₃ receptor ligand having an α-C-glycosidic structure, was synthesized via a radical cyclization reaction with a temporary connecting allylsilyl group as the key-step. Phenyl 2-O-allyldimethylsilyl-3,4-bis-O-TBS-1-seleno-β-d-glucopyranoside (10a), conformationally restricted in the unusual ¹C₄-conformation, was treated with Bu₃SnH/AIBN to form the desired α-cyclization product 16a almost quantitatively. On the other hand, when a conformationally unrestricted O-benzyl-protected 2-O-allyldimethylsilyl -1-selenoglucoside 15 was used as the substrate, the radical reaction was not stereoselective and gave a mixture of the α-and β-products. From 16a, the target C-glucoside trisphosphate 9 was synthesized via phosphorylation of the hydroxyls by the phosphoramidite method. During the synthetic study, an efficient procedure for the oxidative C-Si bond cleavage, via a nucleophilic substitution at the silicon with p-MeOPhLi followed by Fleming oxidation, was developed. The C-glycoside 9 was found to be a full agonist for Ca²⁺ mobilization, although its activity was weaker than that of the natural ligand IP₃. Thus, the α-C-glucosidic structure was shown to be a useful mimic of the myo-inositol backbone of IP₃.