Novel diode laser-compatible fluorophores and their application to single molecule detection, protein labeling and fluorescence resonance energy transfer immunoassay

We describe a series of new long-wave absorbing and fluorescing cyanine dyes and labels (based on a general logic for the design of such dyes), their spectra, covalent and noncovalent linkage to proteins, their use in single molecule detection (SMD) and as donors and acceptors, respectively, in fluorescence resonance energy transfer studies. The new labels represent water-soluble and reactive fluorophores whose quantum yields increase substantially if noncovalently or covalently bound to proteins. Due to their strong absorptions between 550 and 700 nm they are excitable by light-emitting diodes or diode lasers. Their high absorbances (epsilon around 100,000) and adequate fluorescence quantum yields (phi up to 0.68 if bound to proteins) along with their availability as reactive NHS esters make them viable labels for proteins and oligomers, e.g. in context with SMD or fluorescence energy transfer immunoassay which is demonstrated for the system HSA/anti-HSA.     

Chemistry of polyfunctional molecules-123. Reactions of BiBr3, SbI3 and AsI3 with LiN(PPh2)2; X-ray structure of a cyclophosphazene salt containing arsenic(I)

BiBr₃ or SbI₃ react at 20°C with LiN(PPh₂)₂ (1) to give elementary Bi or Sb and the P---P coupled phosphazene ligand Ph₂P---N=PPh₂---PPh₂=N---PPh₂ (2). The reaction of AsI₃ with 1 at room temperature formed yellow needles of the eight-membered heterocycle (3), whereas AsI₃ interacted at 80°C with 1 in the molar ratio of 1:3 to give elementary arsenic and 2. Treatment of AsI₃ and 1 at 20°C in a 1:2 stoichiometry yielded the seven-membered, cyclic arsenium(I) salt

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I·4THF (5·4THF), which was characterized by elemental analysis, conductivity, mass, IR and NMR spectroscopy and single-crystal X-ray structural analysis.     

Alkylidenverbrückte, symmetrische, zweikernige Metallocenkomplexe als Katalysatoren für die Propylenpolymerisation

The synthesis is described of symmetric alkylidene bridged dinuclear zirconocene complexes. The influence of structural parameters and different cocatalysts such as methylaluminoxane (MAO), triphenyl tetrakis(pentafluorophenyl)borate- or tris(pentafluorophenyl)borane has been investigated for homogeneous propylene polymerization. The dinuclear catalysts show highest polymerization activities by activation with MAO. Activation with triphenyl tetrakis(pentafluorophenyl)borate results in polypropylenes with the highest degree of isotacticity. Compared to the mononuclear reference catalyst the dinuclear MAO activated complex achieved higher propylene polymerization activity and the polypropylene obtained from the dinuclear complex has a higher molecular weight than that one that was produced with the mononuclear complex.     

Theoretical studies on reductive etherification reactions between aromatic aldehydes and alcohols

The mechanism of reductive etherification reactions between aromatic aldehydes and alcohols has been investigated with the DFT(B3LYP)/6-31G method. One or two BH(3) molecules have been used to simulate the role of the catalyst and reducing agent. The solvent effects of the title reactions have been studied by the PCM model. It is found that the reactions between aromatic aldehydes and primary, secondary, and tertiary alcohols can proceed more easily in a polar solvent such as acetonitrile. The results provide evidence in theory to broaden the applications of reductive etherification reactions for the optimization of the radiochemical synthesis process of (18)F-labeled ether radiotracers.     

Neutral loss of amino acid residues from protonated peptides in collision-induced dissociation generates N- or C-terminal sequence ladders

The widespread occurrence of the neutral loss of one to six amino acid residues as neutral fragments from doubly protonated tryptic peptides is documented for 23 peptides with individual sequences. Neutral loss of amino acids from the N-terminus of doubly charged tryptic peptides results in doubly charged y-ions, forming a ladder-like series with the ions [M + 2H](2+) = y(max) (2+), y(max - 1) (2+), y(max - 2) (2+), etc. An internal residue such as histidine, proline, lysine or arginine appears to favor this type of fragmentation, although it was sometimes also observed for peptides without this structure. For doubly protonated non-tryptic peptides with one of these residues at or near the N-terminus, we observed neutral loss from the C-terminus, resulting in a doubly charged b-type ion ladder. The analyses were performed by Q-TOF tandem mass spectrometry, facilitating the recognition of neutral loss ladders by their 2+ charge state and the conversion of the observed mass differences into reliable sequence information. It is shown that the neutral loss of amino acid residues requires low collision offset values, a simple mechanistic explanation based on established fragmentation rules is proposed and the utility of this neutral loss fragmentation pathway as an additional source for dependable peptide sequence information is documented.     

Solvation largely accounts for the effect of N-alkylation on the properties of nickel(II/I) and chromium(III/II) cyclam complexes

The source of the effect of N-alkylation on the redox properties of Ni(II/I) and Cr(III/II) cyclam complexes has been investigated using DFT calculations. The structures of the anhydrous and hydrated complexes were optimized in the gas phase, and single point calculations were performed in a polarized continuum. The main results are the following: the decrease in outer sphere solvation upon N-alkylation is the major source of the relative stabilization of the lower oxidation state complexes by the tertiary amine ligands; tertiary amine nitrogen donors are stronger sigma-donors than the secondary amines, as predicted from the inductive effect of alkyls; steric strain elongates the metal-nitrogen bonds in the tertiary complexes and decreases the ligand strain energies; and the site of water binding to the complexes differs because of their different electronic structures (i.e., in the Ni complexes, the water molecules bind to the M[bond]N[bond]H sites, whereas in the Cr complexes they bind to the central metal cation). Outer sphere hydrogen bonding of water to the ligands in the coordination sphere lowers the ionization potentials by charge delocalization.     

Tachibana-type theorems and special Holonomy

Annals of Global Analysis and Geometry - In the present paper, we consider star-shaped mean convex hypersurfaces of the real, complex and quaternionic hyperbolic space evolving by a class of...     

Fractal wavelet dimensions and localization

In this paper we want to give a new definition of fractal dimensions as small scale behavior of theq-energy of wavelet transforms. This is a generalization of previous multi-fractal approaches. With this particular definition we will show that the 2-dimension (=correlation dimension) of the spectral measure determines the long time behavior of the time evolution generated by a bounded self-adjoint operator acting in some Hilbert space ?. It will be proved that for φ, ψ∈? we have $$\mathop {\lim \inf }\limits_{T \to \infty } \frac{{\log \int_0^T {d\omega \left| {\left\langle {\psi \left| {e^{ - iA\omega } } \right.\phi } \right\rangle } \right|^2 } }}{{\log T}} = - \kappa ^ + (2)$$ and that $$\mathop {\lim \sup }\limits_{T \to \infty } \frac{{\log \int_0^T {d\omega \left| {\left\langle {\psi \left| {e^{ - iA\omega } } \right.\phi } \right\rangle } \right|^2 } }}{{\log T}} = - \kappa ^ - (2),$$ wherek ^±(2) are the upper and lower correlation dimensions of the spectral measure associated with ψ and ?. A quantitative version of the RAGE theorem shall also be given.