Surface plasmon resonance and Raman scattering effects studied for layers deposited on Spreeta sensors

The possibility to detect and prospectively to characterize deposited organic layers directly on Spreeta sensors by Fourier transform Raman spectroscopy was studied. A special holder of sensors that enabled measurement of FT Raman spectra was developed. The effects of various angles of incidence of the laser beam on the sensor surface were studied with respect to the intensity of Raman spectra and to the risks of artifacts. No effect of measurement of FT Raman spectra on SPR functionality of sensors was proven. The key role of the surface morphology of the sensing gold layer on repeatability of SPR curves and the possibility to check the surface by optical microscopy was demonstrated.     

Statistical Mechanics of a Simplified Bipartite Matching Problem: An Analytical Treatment

We perform an analytical study of a simplified bipartite matching problem in which there exists a constant matching energy, and both heterosexual and homosexual pairings are allowed. We obtain the partition function in a closed analytical form and we calculate the corresponding thermodynamic functions of this model. We conclude that the model is favored at high temperatures, for which the probabilities of heterosexual and homosexual pairs tend to become equal. In the limits of low and high temperatures, the system is extensive, however this property is lost in the general case. There exists a relation between the matching energies for which the system becomes more stable under external (thermal) perturbations. As the difference of energies between the two possible matches increases the system becomes more ordered, while the maximum of entropy is achieved when these energies are equal. In this limit, there is a first order phase transition between two phases with constant entropy.     

Observation and analysis of in vivo vocal fold tissue instabilities produced by nonlinear source-filter coupling: a case study

Different source-related factors can lead to vocal fold instabilities and bifurcations referred to as voice breaks. Nonlinear coupling in phonation suggests that changes in acoustic loading can also be responsible for this unstable behavior. However, no in vivo visualization of tissue motion during these acoustically induced instabilities has been reported. Simultaneous recordings of laryngeal high-speed videoendoscopy, acoustics, aerodynamics, electroglottography, and neck skin acceleration are obtained from a participant consistently exhibiting voice breaks during pitch glide maneuvers. Results suggest that acoustically induced and source-induced instabilities can be distinguished at the tissue level. Differences in vibratory patterns are described through kymography and phonovibrography; measures of glottal area, open/speed quotient, and amplitude/phase asymmetry; and empirical orthogonal function decomposition. Acoustically induced tissue instabilities appear abruptly and exhibit irregular vocal fold motion after the bifurcation point, whereas source-induced ones show a smoother transition. These observations are also reflected in the acoustic and acceleration signals. Added aperiodicity is observed after the acoustically induced break, and harmonic changes appear prior to the bifurcation for the source-induced break. Both types of breaks appear to be subcritical bifurcations due to the presence of hysteresis and amplitude changes after the frequency jumps. These results are consistent with previous studies and the nonlinear source-filter coupling theory.     

The sound generated by a square cylinder with a splitter plate at low Reynolds number

The generation of aerodynamic sound by the interaction of flow at a Reynolds number of 150 and a Mach number of 0.2 with a rigid square cylinder attached to a rigid thin flat plate is numerically investigated. When the length of the plate is varied from L=0.5D to 6D, where D is the side length of the square cylinder, the results can be grouped into three distinct regimes. For the first regime (L?D), the sound levels decrease with increasing plate length. A 3 dB sound reduction is obtained when the length of the plate is D. For the second regime (1.25D?L?4.75D), the sound levels increase with increasing plate length. For the third regime (5D?L?6D), the sound levels decrease as the length of the plate increases but the levels are higher than for the other regimes. Results also show that the lift fluctuation is the dominant sound source. These acoustic results can be explained in terms of the fluid mechanics occurring in the near wake of the cylinder.     

Cyclodextrin modified gold nanoparticles-based open-tubular capillary electrochromatographic separations of polyaromatic hydrocarbons

In this study, spherical gold nanoparticles (GNPs) of 14.7 nm diameter, prepared by citrate reduction of a gold(III) salt and characterized by UV–Vis absorption spectrometry and transmission electron microscopy, were modified by a covalent attachment of 6^I-O-(3-mercaptopropyl)β-cyclodextrin (β-CD-SH) or per-6-deoxy-per-6-mercapto-β-cyclodextrin (β-CD-SH7). Subsequently, via three alternative approaches, β-CD-modified GNPs were immobilized onto the inner wall of the fused-silica (FS) capillaries and applied as special stationary phases for open-tubular capillary electrochromatography (OT-CEC). The first immobilization procedure was based on pre-derivatization of a FS capillary with (3-mercaptopropyl)trimethoxysilane (MPTMS) followed by subsequent reactions with GNPs and β-CD-SH or β-CD-SH7. The other two preparation protocols took advantage of sol–gel approach gaining a significant increase in the interaction surface for solutes. In both instances, the sol–gel created 3D structure was further covalently modified with GNPs. Serving that purpose, either β-CD-SH7 modified GNPs were used for the immobilization into the sol–gel matrix (“one-step sol–gel technique”) or native GNPs were immobilized first into the sol–gel matrix and subsequently modified with β-CD-SH7 (“two-step sol–gel technique”). The separation performance of CD-GNPs modified FS capillaries was tested by OT-CEC in reversed-phase mode applied to separation of a model mixture of five polyaromatic hydrocarbons. The highest separation efficiencies were obtained with the capillaries prepared by two-step sol–gel technique. However, with respect to the relatively low reproducibility of this method, the first of the above preparation procedures, i.e., a simple pre-derivatization of the FS capillary with MPTMS ensued with β-CD-SH7-GNPs immobilization seems to be more feasible approach providing decent separation efficiency.     

Identification of phosphorylation sites of equine β‐casein isoforms

Equine β‐casein is phosphorylated at variable degrees and isoforms carrying 3 to 7 phosphate groups (3P–7P) have been found in milk, but the phosphorylated amino acid residues of each isoform are not yet identified. In the present work, the different phosphorylation variants were first isolated by ion‐exchange chromatography and then hydrolysed by trypsin to generate caseinophosphopeptides (CPPs), each containing all the potential phosphorylation sites. The equine CPPs were prepared by metal oxide affinity chromatography, a method based on the affinity of phosphate groups towards titanium dioxide immobilized onto a micro‐column. This method turned out to be an efficient tool to separate the CPPs Arg¹–Lys³⁴ and Glu⁴–Lys³⁴ from non‐phosphorylated peptides. Purification was achieved by reversed‐phase high‐performance liquid chromatography (RP‐HPLC) and each CPP was hydrolyzed by endoproteinase Glu‐C. Finally, the digests were analyzed by RP‐HPLC/electrospray ionization mass spectrometry (RP‐HPLC/ESI‐MS) and identified by nano‐electrospray ionization tandem mass spectrometry (nESI‐MS/MS) to locate the phosphorylated sites of the β‐casein isoforms 4P–7P with accuracy. Thus, the isoform 4P was found to be phosphorylated on residues Ser⁹, Ser²³, Ser²⁴, and Ser²⁵. Addition of phosphate groups on Ser¹⁸, Thr¹², and Ser¹⁰ led to the formation of the isoforms 5P–7P, respectively. The results indicated that the in vivo phosphorylation of the equine β‐casein follows a sequential way and is not randomly performed. Copyright © 2010 John Wiley & Sons, Ltd.     

An SQP method for mathematical programs with vanishing constraints with strong convergence properties

We propose an SQP algorithm for mathematical programs with vanishing constraints which solves at each iteration a quadratic program with linear vanishing constraints. The algorithm is based on the newly developed concept of \({\mathcal {Q}}\)-stationarity (Benko and Gfrerer in Optimization 66(1):61–92, 2017). We demonstrate how \({\mathcal {Q}}_M\)-stationary solutions of the quadratic program can be obtained. We show that all limit points of the sequence of iterates generated by the basic SQP method are at least M-stationary and by some extension of the method we also guarantee the stronger property of \({\mathcal {Q}}_M\)-stationarity of the limit points.     

Effect of synthesis conditions on the microstructure of TEOS derived silica hydrogels synthesized by the alcohol-free sol–gel route

Silica matrices synthesized from a pre-hydrolysis step in ethanol followed by alcohol removal at low pressure distillation, and condensation in water, are suitable for encapsulation of biomolecules and microorganisms and building bioactive materials with optimized optical properties. Here we analyze the microstructure of these hydrogels from the dependence of I(q) data acquired from SAXS experiments over a wide range of silica concentration and pH employed in the condensation step. From the resulting data it is shown that there is a clear correlation between the microscopic parameters—cluster fractal dimension (D), elementary particle radius (a) and cluster gyration radius (R)—with the attenuation of visible light when the condensation step proceeds at pH < 6. At higher pHs, there is a steep dependence of the cluster density (~R ^D−3) with the condensation pH, and non-monotonous changes of attenuance are less than 20%, revealing the complexity of the system. These results, which were obtained for a wide pH and silica concentration range, reinforce the idea that the behavior of gels determined in a restricted interval of synthesis variables cannot be extrapolated, and comparison of gelation times is not enough for predicting their properties.     

Specific O₂⁻ generation in corona discharge for ion mobility spectrometry

This study deals with O₂⁻ generation in corona discharge (CD) in point to plane geometry for single flow ion mobility spectrometry (IMS) with gas outlet located behind the ionization source. We have designed CD of special geometry in order to achieve the high O₂⁻ yield. Using this ion source we have achieved in zero air conditions that up to 74% all negative ions were O₂⁻ or O₂⁻(H₂O). It has been demonstrated that the non-electronegative nitrogen positively influences the efficiency of O₂⁻ generation in O₂/N₂ mixtures. The reduced ion mobility of 2.27 cm² V⁻¹ s⁻¹ has been measured for O₂⁻/O₂⁻(H₂O) ions in zero air. Additional ions detected in zero air (less than 200 ppb CO₂) using the mass spectrometric and IMS technique were, NO₂⁻, N₂O₂⁻ (2.37 cm² V⁻¹ s⁻¹), NO₃⁻, N₂O₃⁻ and N₂O₃⁻(H₂O). The CO₃⁻ and CO₄⁻ ions have been detected after the introduction of 5 ppm CO₂ into zero air.