Raman Scattering Intensities of the NO2 Symmetric Stretching Vibration Band of Some Aromatic Nitrocompounds (II)

The Raman scattering intensities of the NO₂ symmetric stretching vibration band were investigated experimentally for some para and meta substituted nitrobenzenes. The excitation profiles obtained with the six excitation wavelengths from 457.9 to 514.5 nm were presented. The results were examined in terms of the Albrecht-Hutley's theory, and the electronic states involved in the preresonance Raman intensity enhancement were suggested.     

Synthesis and properties of functional dyes with squaraine–naphthalene diimide hybrid structure

Naphthalene diimides (NDIs) are promising candidate for electron acceptors due to their low-lying HOMOs and LUMOs. The functinalization of soluble NDIs at the 2,6-position affects the absorption and electrochemical properties. In this study, NDI-based hybrid dyes NDI-SQ-A, B fused with squaraine chromophore were designed and synthesized in order to elucidate the effects of the substitution on their optical and electrochemical properties. These dyes were successfully synthesized by Stille coupling reactions using 3-stannylcyclobutenediones and brominated NDI derivative, followed by a condensation reaction. DFT calculation predicts that the present dyes adopt distorted structures coming from a steric hindrance between semisquaraine and NDI moieties. The hybrid dyes show low-lying LUMOs due to the introduction of electron-deficient NDI moiety and broad absorption spectra in the far-red region. The absorption spectra of their thin films were bathochromically shifted relative to those in solution, indicating that hybrid dyes formed J aggregates.     

Surface activity of solid particles with extremely rough surfaces

The solid particles are adsorbed at liquid-liquid interfaces and form self-assembled structures when the particles have suitable wettability to both liquids. Here, we show theoretically how the extreme roughness on the particle surface affects their adsorption properties. In our previous work, we discussed the adsorption behavior of the solid particles with microstructured surfaces using the so-called Wenzel model [Y. Nonomura et al., J. Phys. Chem. B 110 (2006) 13124]. In the present study, the wettability and the adsorbed position of the particles with extremely rough surfaces are studied based on the Cassie-Baxter model. We predict that the adsorbed position and the interfacial energy depend on the interfacial tensions between the solid and liquid phases, the radius of the particle, and the fraction of the particle surface area that is in contact with the external liquid phase. Interestingly, the initial state of the system governs whether the particle is adsorbed at the interface or not. The shape of the particle is also an important factor which governs the adsorbed position. The disk-shaped particle and the spherical particle which is partially covered with the extremely rough surface, i.e. Janus particle, are adsorbed at the liquid-liquid interface in an oriented state. We should consider not only the interfacial tensions, but also the surface structure and the particle shape to control the adsorption behavior of the particle.     

Development of Donor-π-Acceptor-Type Fluorinated Tolanes as Compact Condensed Phase Luminophores and Applications in Photoluminescent Liquid-Crystalline Molecules

Fluorinated tolanes, produced by introducing fluorine atoms into one of the aromatic rings of tolane, emitted almost no fluorescence in a solution state, but the fluorescence intensity increased dramatically in the crystalline state because of intermolecular H⋅⋅⋅F hydrogen bonds. The photoluminescent (PL) colors depend on the molecular orbitals, dipole moments, and molecular aggregated structures can be varied by controlling terminal substituents along the major molecular axis. The introduction of a long alkoxy or semifluoroalkoxy unit as a flexible chain into the terminal positions along the major molecular axis induced the formation of a liquid-crystalline (LC) phase; fluorinated tolanes act both as luminophores and as mesogens, leading to the molecular design of new photoluminescent LC molecules (PLLCs). The results also indicated that a fluorinated tolane dimer, which consists of two fluorinated tolanes linked by a flexible alkylene spacer, also becomes a novel PLLC.     

An efficient unnatural base pair for PCR amplification

Expansion of the genetic alphabet by an unnatural base pair system provides a powerful tool for modern biotechnology. As an alternative to previous unnatural base pairs, we have developed a new pair between 7-(2-thienyl)imidazo[4,5-b]pyridine (Ds) and 2-nitropyrrole (Pn), which functions in DNA amplification. Pn more selectively pairs with Ds in replication than another previously reported pairing partner, pyrrole-2-carbaldehyde (Pa). The nitro group of Pn efficiently prevented the mispairing with A. High efficiency and selectivity of the Ds-Pn pair in PCR amplification were achieved by using a substrate mixture of the gamma-amidotriphosphate of Ds and the usual triphosphates of Pn and the natural bases, with Vent DNA polymerase as a 3' to 5' exonuclease-proficient polymerase. After 20 cycles of PCR, the total mutation rate of the Ds-Pn site in an amplified DNA fragment was approximately 1%. PCR amplification of DNA fragments containing the unnatural Ds-Pn pair would be useful for expanded genetic systems in DNA-based biotechnology.     

On the Kodaira Dimension of the Moduli Space of K3 Surfaces II

We show that the Kodaira dimension of the moduli space of polarized K3 surfaces of degree 2n in non negative if n = 42, 43, 51, 53, 55, 57, 59, 61, 66, 67, 69, 74, 83, 85, 105, 119 or 133. We use an automorphic form associated with the fake monster Lie algebra constructed by Borcherds.     

Chemical reaction-inspired crystal growth of a coordination polymer toward morphology design and control

This paper reports a novel crystal growth system of a coordination framework {[Cu3(CN)3{hat-(CN)3(OEt)3}]}n (1) (hat-(CN)3(OEt)3 = 2,6,10-tricyano-3,7,11-triethoxy-1,4,5,8,9,12-hexaazatriphenylene). The coordination polymer is crystallized through the reaction of 2,3,6,7,10,11-hexacyano-1,4,5,8,9,12-hexaazatriphenylene (hat-(CN)6), ethanol, and copper(I) complex, involving the breaking and forming of covalent bonds. The crystal morphologies obtained in the present system contain dumbbells, cogwheels, and superlattices. Moreover, in the growth perpendicular to the c-axis, periodic ramification at regular interval is observed, affording superlattice morphologies. Observation of the growth of dumbbell crystals shows that the growth rates parallel and perpendicular to the crystallographic c-axis are quite different: the former shows a drastic change with the reaction duration, while the latter is almost constant. These results are reproduced as a simple reaction-diffusion system, indicating that chemical reactions on crystal surfaces play an important role in determining the macroscopic crystal morphologies.     

Cation-pi interaction in the polyolefin cyclization cascade uncovered by incorporating unnatural amino acids into the catalytic sites of squalene cyclase

It has been assumed that the pi-electrons of aromatic residues in the catalytic sites of triterpene cyclases stabilize the cationic intermediates formed during the polycyclization cascade of squalene or oxidosqualene, but no definitive experimental evidence has been given. To validate this cation-pi interaction, natural and unnatural aromatic amino acids were site-specifically incorporated into squalene-hopene cyclase (SHC) from Alicyclobacillus acidocaldarius and the kinetic data of the mutants were compared with that of the wild-type SHC. The catalytic sites of Phe365 and Phe605 were substituted with O-methyltyrosine, tyrosine, and tryptophan, which have higher cation-pi binding energies than phenylalanine. These replacements actually increased the SHC activity at low temperature, but decreased the activity at high temperature, as compared with the wild-type SHC. This decreased activity is due to the disorganization of the protein architecture caused by the introduction of the amino acids more bulky than phenylalanine. Then, mono-, di-, and trifluorophenylalanines were incorporated at positions 365 and 605; these amino acids reduce cation-pi binding energies but have van der Waals radii similar to that of phenylalanine. The activities of the SHC variants with fluorophenylalanines were found to be inversely proportional to the number of the fluorine atoms on the aromatic ring and clearly correlated with the cation-pi binding energies of the ring moiety. No serious structural alteration was observed for these variants even at high temperature. These results unambiguously show that the pi-electron density of residues 365 and 605 has a crucial role for the efficient polycyclization reaction by SHC. This is the first report to demonstrate experimentally the involvement of cation-pi interaction in triterpene biosynthesis.     

Evaluation of the Sanita-kun coliforms, a dehydrated medium sheet for coliform detection. Performance-Tested Method 100402

The Sanita-kun Coliforms consists of a transparent cover film, an adhesive sheet, a layer of nonwoven fabric, and a water-soluble compound film, including a culture medium formula for the detection of coliforms. The medium sheet was validated with 26 food types belonging to 9 food categories (meat, poultry, fish and seafood, fruits and vegetable, dairy, chocolate or bakery, animal feeds, pasta, and miscellaneous) using violet red bile (VRB) agar method in the U.S. Food and Drug Administration's Bacteriological Analytical Manual as a reference according to the AOAC guideline. The medium sheet showed 100% inclusivity and exclusivity. Ruggedness study suggested allowances in the incubation temperature and time as 33-35 degrees C and 24 +/- 4 h, respectively. The performance of 3 different lots of the medium sheets was equivalent and suggested no change of the performance at least for 3 years. In the comparative recovery study, many samples (84.6%), which were inoculated with a coliform strain, showed no significant difference between the 2 methods. The linear correlation coefficient (r2) to the VRB agar was calculated as 0.94. In the repeatability study, the average relative standard deviation of total foods was 0.10 in the medium sheet. In the independent study, the medium sheet detected significantly more colonies than VRB plates in the frozen raw milk sample, while there was no significant difference between the 2 methods in raw ground beef sample. Comparative recovery study on foods, inoculated and then frozen, showed the medium sheet detected injured cells with better recovery than VRB agar. The analysts in the independent study wrote that the medium sheet was easy to use and read overall. The Sanita-kun sheet provides an alternative method to coliform count agar.