Rational Design for Cooperative Recognition of Specific Nucleobases Using β‐Cyclodextrin‐Modified DNAs and Fluorescent Ligands on DNA and RNA Scaffolds

We propose a binary fluorimetric method for DNA and RNA analysis by the combined use of two probes rationally designed to work cooperatively. One probe is an oligonucleotide (ODN) conjugate bearing a β‐cyclodextrin (β‐CyD). The other probe is a small reporter ligand, which comprises linked molecules of a nucleobase‐specific heterocycle and an environment‐sensitive fluorophore. The heterocycle of the reporter ligand recognizes a single nucleobase displayed in a gap on the target labeled with the conjugate and, at the same time, the fluorophore moiety forms a luminous inclusion complex with nearby β‐CyD. Three reporter ligands, MNDS (naphthyridine–dansyl linked ligand), MNDB (naphthyridine–DBD), and DPDB (pyridine–DBD), were used for DNA and RNA probing with 3′‐end or 5′‐end modified β‐CyD – ODN conjugates. For the DNA target, the β‐CyD tethered to the 3′‐end of the ODN facing into the gap interacted with the fluorophore sticking out into the major groove of the gap site ( MNDS and DPDB ). Meanwhile the β‐CyD on the 5′‐end of the ODN interacted with the fluorophore in the minor groove ( MNDB and DPDB ). The results obtained by this study could be a guideline for the design of binary DNA/RNA probe systems based on controlling the proximity of functional molecules.     

Three lanostane triterpenoids with antitrypanosomal activity from the fruiting body of Hexagonia tenuis

During the search for new antitrypanosomal drug leads, three new antitrypanosomal compounds, hexatenuins A–C (1–3), were isolated from the fruiting body of Hexagonia tenuis. 1 and 3 possessed an unusual malonate half-ester functional group at C-3 position, and 1 and 2 had a spirostructure in the side-chain. Their structures were elucidated using MS analyses, extensive 2D-heteronuclear NMR data interpretation. Compounds 1–3 showed in vitro antitrypanosomal activity against Trypanosoma brucei brucei with IC₅₀ values of 0.57, 8.60 and 5.62 μg/ml, respectively.     

Simple method for selective oxidation of 1,2-diols in water with KBrO3/KHSO4

Readily available off-the-shelf KBrO₃ and KHSO₄ have been used to selectively oxidize 1,2-diols in water as a solvent. Various cyclic 1,2-diols have been tolerated affording their corresponding α-hydroxy ketones in good yields.     

Enantioselective Total Synthesis of Pinnaic Acid and Halichlorine

The enantioselective total synthesis of the bioactive marine natural products pinnaic acid and halichlorine is reported in detail. Our total synthesis features the construction of the five‐membered ring and C9 and C13 stereogenic centers through a palladium‐catalyzed trimethylenemethane [3+2] cyclization; the installation of the nitrogen atom through a regioselective Beckmann rearrangement of a poorly reactive ketone; the stereoselective cyclization of the spiro ring through a four‐step, one‐pot hydrogenation–cyclization; and efficient connection of the sterically hindered lower chain through a reduced‐pressure cross olefin metathesis reaction.     

Poly‐ε‐Lysine Modified Nanocarbon Film Electrodes for LPS Detection

We developed an electrochemical system for detecting lipopolysaccharide (LPS) that uses an ultraflat nanocarbon film electrode modified with poly‐ε‐lysine with a high affinity to LPS. LPS was captured on the modified electrode, and then ferrocene labeled polymyxin B (FcPMB) was captured on the LPS adsorbed electrode via the LPS‐PMB affinity interaction. The adsorbed FcPMB provided an amplified response with Fe²⁺ ions, and the current response was dependent on the amount of captured LPS (LOD=2.0 ng/mL). This was due to the efficient accumulation of the obtained current for LPS and the very low noise made possible by the ultraflat surface.     

Supramolecular Approaches towards Ordered Polymer Materials

Controlled organization of polymer chains into ordered structures is highly important to tune or enhance the properties of the polymeric materials. A supramolecular approach using host–guest chemistry has allowed rational design of chain assemblies with many functional properties. Nanoporous materials with ordered channel structures are particularly useful for attaining precise assemblies of polymer chains through nanoconfinement.     

Total Synthesis of the Antibiotic Kendomycin: A Macrocyclization Using the Tsuji–Trost Etherification

A highly stereocontrolled, convergent total synthesis of kendomycin [(?)‐TAN2162], an ansa‐macrocyclic antibiotic, is reported. The key of the strategy is an unprecedented Tsuji–Trost macrocyclic etherification, followed by a transannular Claisen rearrangement to construct the 18‐membered carbocyclic framework. The oxa‐six‐ and five‐membered rings were also stereoselectively constructed respectively by a cascade oxidative cyclization at an unfunctionalized benzylic position and using a one‐pot epoxidation/5‐exo‐tet epoxide opening.     

Cationic polymerization with titanium(iv) compounds: Living polymerization and possibility of stereoregulation

This paper deals with the development of living cationic polymerizations and the possibility of stereoregulation therein based on the modulation of the Lewis acid activators by their ligands. For this, titanium(IV) chlorides [TiCl₄-n(OR)n] with various alkoxy or aryloxy groups were synthesized and employed for the cationic polymerizations of isobutyl vinyl ether (IBVE) in conjunction with HCl-IBVE adduct. Living polymerizations were feasible with the titanium chlorides [TiCl₂(OR)₂] disubstituted with isopropoxy or phenoxy groups in CH₂Cl₂ at −15°C. The meso (isotactic) contents of the polymers obtained with TiCl₂(OR)₂ at −78°C became larger (up to 86%) with bulkier o-substituents of phenoxy groups on the titanium compounds.     

In Vitro and In Silico Study of Analogs of Plant Product Plastoquinone to Be Effective in Colorectal Cancer Treatment

Plants have paved the way for the attainment of molecules with a wide-range of biological activities. However, plant products occasionally show low biological activities and/or poor pharmacokinetic properties. In that case, development of their derivatives as drugs from the plant world has been actively performed. As plant products, plastoquinones (PQs) have been of high importance in anticancer drug design and discovery; we have previously evaluated and reported the potential cytotoxic effects of a series of PQ analogs. Among these analogs, PQ2, PQ3 and PQ10 were selected for National Cancer Institute (NCI) for in vitro screening of anticancer activity against a wide range of cancer cell lines. The apparent superior anticancer potency of PQ2 on the HCT-116 colorectal cancer cell line than that of PQ3 and PQ10 compared to other tested cell lines has encouraged us to perform further mechanistic studies to enlighten the mode of anti-colorectal cancer action of PQ2. For this purpose, its apoptotic effects on the HCT-116 cell line, DNA binding capacity and several crucial pharmacokinetic properties were investigated. Initially, MTT assay was conducted for PQ2 at different concentrations against HCT-116 cells. Results indicated that PQ2 exhibited significant cytotoxicity in HCT-116 cells with an IC₅₀ value of 4.97 ± 1.93 μM compared to cisplatin (IC₅₀ = 26.65 ± 7.85 μM). Moreover, apoptotic effects of PQ2 on HCT-116 cells were investigated by the annexin V/ethidium homodimer III staining method and PQ2 significantly induced apoptosis in HCT-116 cells compared to cisplatin. Based on the potent DNA cleavage capacity of PQ2, molecular docking studies were conducted in the minor groove of the double helix of DNA and PQ2 presented a key hydrogen bonding through its methoxy moiety. Overall, both in vitro and in silico studies indicated that effective, orally bioavailable drug-like PQ2 attracted attention for colorectal cancer treatment. The most important point to emerge from this study is that appropriate derivatization of a plant product leads to unique biologically active compounds.     

New cyclic tellurides. Synthesis, reaction and ligand properties of 2,2,6,6-tetramethyl-1-oxa-4-tellura-2,6-disilacyclohexane (C6H16OSi2Te). X-Ray structure determination of C6H16OSi2TeI2

A new tellurium-containing heterocyclic compound, 2,2,6,6-tetramethyl-1-oxa-4-tellura-2,6-disilacyclohexane (C₆H₁₆OSi₂Te) (1), has been prepared by treatment of 1,3-bis(chloromethyl)-1,1,3,3-tetramethyldisiloxane with sodium telluride. Mononuclear and dinuclear palladium complexes of this telluride have been prepared by the reaction of 1 with PdCl₂(PhCN)₂ and Na₂PdCl₄, respectively. The following new derivatives of 1 have also been produced: C₆H₁₆OSi₂TeI₂ (2), C₆H₁₆OSi₂TeBr₂, C₆H₁₆OSi₂TeCl₂, C₆H₁₆OSi₂Te(CH₃)I, and C₆H₁₆OSi₂Te(CH₂Ph)Br. IR, ¹H and ¹³C NMR and mass spectral data of these new compounds are reported and discussed. ¹H NMR studies revealed that in CDCl₃ solution both telluronium salts reductively eliminate alkyl halide. The crystal structure of compound 2 has been determined by X-ray diffraction. The compound crystallizes in the monoclinic space group, P2₁/c, with four molecules in a unit cell of dimension a 12.960(3), b 8.846(2), c 13.754(4) Å, β 92.44(2)°, R = 0.049, and R_w = 0.067 for 3599 unique reflections with |F₀| > 3σ(F₀). The compound forms a six-membered ring of a slightly displaced boat type. The geometry about the Te atom is pseudo-octahedral, with two carbon atoms (Te-C = 2.156(7) and 2.137(6) Å) and two iodine atoms of the neighbouring molecules (weak intermolecular bonds, Te · I = 3.769 and 3.806 Å) in the equatorial positions and two iodine atoms (Te-I = 2.909(1) and 2.913(1) Å) in the axial positions.