Synthesis and structure of 1-zirconacyclopent-3-yne complexes without substituents adjacent to the triple bond

Five-membered metallacyclic alkynes that have no substituents adjacent to the triple bond have been synthesized, isolated, and structurally characterized. Zirconocene dichlorides, Cp'2ZrCl2 (Cp' = C5H5, C5H4-t-Bu), reacted with 1,4-dichlorobut-2-yne in the presence of magnesium to give 1-zirconacyclopent-3-yne compounds (5 (a) Cp' = C5H5, (b) Cp' = C5H4-t-Bu) that have a -CH2CCCH2- moiety in good yields. They are stable enough to be isolated in a pure form, despite the absence of substituents. 5a reacted with an equimolar amount of Cp2Zr(but-1-ene)(PMe3) to produce a bimetallic complex in which the zirconacyclopentyne coordinates to the other zirconocene moiety as an alkyne.     

Bis(μ‐6‐hydroxy­picolinato)‐μ‐oxo‐bis­[di­pyridine­manganese(III)] monohydrate

The title compound, [Mn₂(μ‐O)(C₆H₃NO₃)₂(C₅H₅N)₄]·H₂O, was isolated from the reaction of 2,6‐pyridine­di­carboxylic acid with [Mn₁₂O₁₂(CH₃COO)₁₆(H₂O)₄] in pyridine. The dimanganese complex has twofold symmetry; the Mn^III atoms are bridged by one oxo and two amidate ligands and show compressed octahedral Jahn–Teller distortion. The molecular packing comprises a three‐dimensional structure constructed by means of extensive intermolecular interactions, including three kinds of hydrogen bonds and π–π interactions.     

Synthesis of oligo(p-phenylene)-linked dyads containing free base, zinc(II) or thallium(III) porphyrins for studies in artificial photosynthesis

A series of (p-phenylene)_n-linked meso-mesityl-substituted porphyrin dyads (n=2-4) was prepared via Suzuki coupling of zinc(II) and free base porphyrin building blocks. The resulting zinc(II)/free base porphyrin dyads were demetalated. The series of free base porphyrin dimers (n=1-4), four other porphyrin dimers (with p-phenylene, diphenylethyne or diphenylbutadiyne linkers; and aryl or tridec-7-yl meso substituents), and several benchmark monomers were converted to the thallium(III)chloride complexes under mild conditions. The collection of eight Tl(III)Cl/Tl(III)Cl dimers is designed for studies of ground-state hole-transfer processes and comparison with the excited-state energy- and hole-transfer processes of the corresponding Zn(II)/free base dyads. Altogether, 18 new porphyrin arrays and benchmark monomers have been prepared.     

Hamigeromycins C-G, 14-membered macrolides from the fungus Hamigera avellanea BCC 17816

Five new 14-membered macrolides, hamigeromycins C-G, together with the previously described compounds, hamigeromycin A and 89-250904-F1 (radicicol analog A), were isolated from the fungus Hamigera avellanea BCC 17816. Hamigeromycins A, C, D, and E are stereoisomers differing from one another in the absolute configurations of the 4′,5′-diol moiety. Hamigeromycins F and G are unusual 5′-keto-analogs, and they are 6′-epimers to each other. The structures and the stereochemistry of the new compounds were deduced by analyses of the NMR spectroscopic and mass spectrometry data in combination with chemical means.     

Chemiluminescence from singlet oxygen that was detected at two wavelengths and effects of biomolecules on it

We developed the detection apparatus that equipped with the two-photomultiplier tubes for chemiluminescence from singlet oxygen. Singlet oxygen was generated with reaction between sodium hypochlorite and hydrogen peroxide. The chemiluminescence from singlet oxygen, the dimol light emission (ca. 634 nm) and the monomol light emission (ca. 1270 nm), was observed simultaneously for the same reaction cell. The effects of sodium azide as an antioxidant, human serum albumin, and α-amino acids on the chemiluminescence based on the both emissions were examined; the observed chemiluminescence could provide direct information with regard to the reaction between singlet oxygen and antioxidant/biomolecules. The apparent rate constants for quenching singlet oxygen in the presence of human serum albumin were calculated to be ca. 3.3 × 10⁹ and ca. 8.8 × 10⁸ M⁻¹ s⁻¹ for the dimol and monomol light emissions, respectively, under the present conditions. The chemiluminescence intensities of the dimol emission decreased in the presence of His, Asp, Phe, Ser, and Tyr, and that of the monomol decreased in the presence of Cys and Trp. The chemiluminescence observed in the presence of biomolcules was discussed together with the reactivities of sodium hypochlorite and hydrogen peroxide to biomolecules.     

Size-dependent reactivity of cobalt cluster ions with nitrogen monoxide: Competition between chemisorption and decomposition of NO

Reactions of NO molecules on cobalt cluster ions were studied in a beam-gas geometry by using a tandem mass spectrometer. Single-particle collision reactions of Co_mNO⁺ (m = 3–10) with NO were found to proceed in such a manner that NO decomposition dominates at m = 4–6 with the maximum reaction cross section at m = 5 and chemisorption dominates in m ≥ 7. On the other hand, in two-particle collision reactions of Co_n⁺ (n = 2–10) with NO, NO decomposition at n ≥ 5 and chemisorption of two NO molecules with Co atoms loss at n ≥ 8 were found to proceed. These results indicate that the size-dependency of the multiple collision reactions originates from secondary attacking of an NO molecule to primary products of the initial single collision reactions. The DFT calculation supports the scheme that both the decomposition and chemisorption of two-particle collision reactions proceed via a common intermediate, Co_mN₂O₂⁺, in which the two NO molecules are dissociatively chemisorbed on the cobalt cluster ion, and the size-dependency of the two-particle collision reactions is explained in terms of the structure of this reaction intermediate.     

Biradical character of linear π-conjugated oligomer dications composed of thiophene, pyrrole, and methylthio end-capping units

Combined DFT calculations and UV-vis-NIR, ESR, and SQUID measurements revealed that the ground-state electronic structure of a linear π-conjugated oligomer dication composed of two pyrrole and six or seven thiophene rings and methylthio end-capping units is dominated by a singlet biradical character.     

Tentative Comparison of Tube Radial Distribution Chromatography and CZE

Tube radical distribution chromatography (TRDC) uses an untreated open tubular capillary tube and a ternary mixture of solvents (water and hydrophilic/hydrophobic organic solvents) as a carrier solution. A model analyte mixture comprising 1-naphthol, 1-naphthoic acid, 1-naphthalenesulfonic acid, 2,6-naphthalenedisulfonic acid, and 1,3,6-naphthalenetrisulfonic acid was examined by the TRDC and capillary zone electrophoresis (CZE) systems that comprised mainly a capillary tube and a detector. In the TRDC system the elution order of analytes could be changed by altering the component ratios of the solvents, whereas in the CZE system the elution order was changed by altering the electroosmotic flow direction. The experimental data obtained provide clues about the features and utility of TRDC as a new separation method.     

A novel synthesis of (+)-biotin from L-cysteine

(+)-Biotin (1) was synthesized in 25% overall yield over 11 steps from L-cysteine. The contiguous asymmetric centers at C-3a and C-6a were formed through a novel and highly stereoselective Lewis base-catalyzed cyanosilylation of alpha-amino aldehyde 3 to provide anti-O-TMS-cyanohydrin 4 with high stereoselectivity and in high yield (anti/syn = 92:8, 96%). Treatment of 4 with a di-Grignard reagent, 1,4-bis(bromomagnesio)butane, followed by carbon dioxide, efficiently installed the 4-carboxybutyl chain at C-4 to give keto acid 5. The final cyclization to bicyclic compound 7b, a precursor to 1, was realized by a palladium-catalyzed intramolecular allylic amination of cis-allylic carbonate 6b that was elaborated from 5.