Dynamic stability of carbonyl ylides

The non- and fluorine-substituted singlet carbonyl ylides are studied by using ab initio MCSCF calculations. The thermodynamic stability of the carbonyl ylides and the intramolecular stability to isomerization or fragmentation reaction coordinates is demonstrated in terms of the topological structure of the ab initio potential energy surfaces. The allylic resonance is found to be dynamically unstable, considering out-of-plane vibrational mode. The instability is studied by the symmetries of the low-lying excitations out of the MCSCF wave function.     

A new synthesis of δ-lactones from oxetanes

Oxetanes were reacted with lithium enolates generated from esters or amides in the presence of boron trifluoride etherate to give δ-hydroxyesters or amides in high yield, which were hydrolyzed and converted to δ-lactones.     

Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. I. Synthesis

Five routes to stable chlorins bearing 0 or 1 meso substituents have been investigated, among which reaction of a 9-bromo-1-formyldipyrromethane and 2,3,4,5-tetrahydro-1,3,3-trimethyldipyrrin proved most effective. Application of this route afforded metallochlorins [Cu(II), Zn(II), and Pd(II)] including the chlorin lacking any β-pyrrole and meso substituents.     

Rapid PCR in a continuous flow device

Continuous flow polymerase chain reaction (CFPCR) devices are compact reactors suitable for microfabrication and the rapid amplification of target DNAs. For a given reactor design, the amplification time can be reduced simply by increasing the flow velocity through the isothermal zones of the device; for flow velocities near the design value, the PCR cocktail reaches thermal equilibrium at each zone quickly, so that near ideal temperature profiles can be obtained. However, at high flow velocities there are penalties of an increased pressure drop and a reduced residence time in each temperature zone for the DNA/reagent mixture, that potentially affect amplification efficiency. This study was carried out to evaluate the thermal and biochemical effects of high flow velocities in a spiral, 20 cycle CFPCR device. Finite element analysis (FEA) was used to determine the steady-state temperature distribution along the micro-channel and the temperature of the DNA/reagent mixture in each temperature zone as a function of linear velocity. The critical transition was between the denaturation (95 degrees C) and renaturation (55 degrees C-68 degrees C) zones; above 6 mm s(-1) the fluid in a passively-cooled channel could not be reduced to the desired temperature and the duration of the temperature transition between zones increased with increased velocity. The amplification performance of the CFPCR as a function of linear velocity was assessed using 500 and 997 base pair (bp) fragments from lambda-DNA. Amplifications at velocities ranging from 1 mm s(-1) to 20 mm s(-1) were investigated. The 500 bp fragment could be observed in a total reaction time of 1.7 min (5.2 s cycle(-1)) and the 997 bp fragment could be detected in 3.2 min (9.7 s cycle(-1)). The longer amplification time required for detection of the 997 bp fragment was due to the device being operated at its enzyme kinetic limit (i.e., Taq polymerase deoxynucleotide incorporation rate).     

Hydrogenation of benzaldehyde and cinnamaldehyde in compressed CO2 medium with a Pt/C catalyst: a study on molecular interactions and pressure effects

The hydrogenation of benzaldehyde and cinnamaldehyde has been studied with a 5% Pt/C catalyst in compressed CO(2). The effect of CO(2) pressure on the total conversion was found to be different between the two aldehydes. The total conversion of benzaldehyde merely decreases with increasing CO(2) pressure, while that of cinnamaldehyde shows a maximum at a certain pressure. High-pressure FTIR measurements indicate the existence of interactions of CO(2) with the aldehydes. The absorption of nu(C=O) red-shifts at increasing CO(2) pressure, and this red-shift is more significant for cinnamaldehyde than for benzaldehyde, indicating that the C=O bond of the former becomes more reactive than the latter. The difference in the mode of interactions of CO(2) with these aldehydes has also been indicated by changes of nu(C=O) of CO(2). Thus, the conversion of benzaldehyde will decrease with increasing CO(2) pressure because of a simple dilution by introducing a larger quantity of CO(2). For cinnamaldehyde, the conversion will increase at low pressures because of increasing interactions with CO(2) molecules (increasing the reactivity of the C=O bond) but decrease at high pressures because of the simple dilution effect, similar to the case of benzaldehyde. The dense CO(2) molecules are not likely to change the catalytic activity of supported Pt particles, which was previously suggested from optical absorption of supported fine metal (Au) particles in a compressed CO(2) medium.     

Novel Knöevenagel-type reaction via titanium enolate derived from Ti(O-i-Pr)4 and diketene

Knöevenagel-type reaction between diketene and aldehydes proceeded in the presence of Ti(O-i-Pr)₄. This reaction proceeded via titanium enolate derived from Ti(O-i-Pr)₄ and diketene. As for the stereoselectivity of the products, E-isomers were produced predominantly in the case of aromatic aldehydes.     

Synthesis and properties of new polyesters having tetrahydrofuran rings in their main chains

New polyesters 6a–6c consisting of 2,4-linked tetrahydrofuran rings were synthesized by bulk polycondensation of methyl trans- and cis-4-hydroxytetrahydrofuran-2-carboxylates ( 5a and 5b ) and a stereoisomeric mixture of methyl 4-hydroxy-5-methyltetrahydrofuran-2-carboxylate ( 5c ) at high temperature. These monomers were prepared from methyl glycolate or methyl lactate and diethyl maleate through a four-step reaction sequence. The polycondensation was carried out without solvent at different temperatures ranging from 150 to 220°C. Titanium isopropoxide was most effective among the catalysts examined, giving polyesters with number-average molecular weights up to 2 × 10⁴. Polyester 6a consisting of trans-2,4-linked tetrahydrofuran rings was soluble in trifluoroacetic acid and a mixed solvent of chloroform and methanol (10/1, v/v). Polyester 6b composed of cis-2,4-linked tetrahydrofuran rings was soluble in dimethyl sulfoxide and dimethylformamide in addition to the two solvents for 6a . Polyester 6c with 5-methyl-substituted tetrahydrofuran rings was composed of a mixture of stereoisomeric units and thus was soluble in a variety of solvents including chloroform, tetrahydrofuran, acetonitrile, dimethyl sulfoxide, and dimethylformamide. The glass transition temperatures of 6a, 6b , and 6c determined by DSC were 109, 88, and 66°C. These polyesters were found to be very slowly hydrolyzed in a neutral phosphate buffer solution at ambient temperature. © 1993 John Wiley & Sons, Inc.     

Radical-initiated homopolymerization and copolymerization of ethyl α-hydroxymethylacrylate

Ethyl α-hydroxymethylacrylate (EHMA) was synthesized and homopolymerized in bulk and in solution. The poly(EHMA) is readily soluble in alcohol, acetone, tetrahydrofuran, and methylene chloride at room temperature. Intramolecular lactone formation occurred when poly(EHMA) was heated to 180–230°C. The kinetics of EHMA homopolymerization was investigated in ethyl acetate, using α,α′-azobisisobutylonitrile as an initiator. The rate of polymerization R_p was expressed by R_p = k[AIBN]^0.50[EHMA]^1.4 and the overall activation energy was calculated as 71.9 kJ/mol. Kinetic constants for EHMA polymerization were obtained as follows: k_p/k = 0.17L^0.9mol^?0.9s^?0.5; 2fk_d = 1.5 × 10^?5 s^?1. The relative reactivity ratios of EHMA(M₂) copolymerization with styrene (r₁ = 0.472, r₂ = 0.564) in ethyl acetate were obtained. Applying the Q-e scheme led to Q = 0.84 and e = 0.35 for EHMA.     

Highly efficient recognition of native TpT by artificial ditopic hydrogen-bonding receptors possessing a conformationally well-defined linkage

Synthesis and binding affinity of rationally designed artificial ditopic nucleobase receptors are reported. The ditopic receptors were designed to recognize thymine-thymine dinucleotides by their two hydrogen-bonding moieties, which are connected to conformationally well-defined linkages such as ferrocene and biphenylene. The ditopic receptors exhibited a remarkably strong binding affinity for lipophilic TpT analogue in CDCl(3)/DMSO-d(6) (85:15, v/v). The binding affinity of the ditopic receptors for the dinucleotide was so high that even native TpT was extracted by them into CDCl(3). Detailed comparisons for the recognition abilities of the ditopic receptors were also conducted.