Hétérocycles contenant du phosphore. XXIII—Etude par RMP de dérivés de l'oxazaphospholane-1,3,2: III—Interprétation des résultats. Tentative d'analyse conformationnelle

By employing certain hypotheses, it is possible to determine the C₄? C₅ conformation of the various 1,3,2-oxazaphospholane derivatives for which PMR parameters have been calculated previously.     

Regioselective dienolate formation and alkylation of alkyl 2-methyl cyclohexene-1 carboxylates

Exocyclic deprotonation and α alkylation with methyliodide of title compounds have been observed. A clarification of Hagemann ester ethylene ketal reactivity toward strong bases is given.     

Etude par RMN du proton d'hétérocycles voisins de l'oxazaphospholane-1,3,2. I—La phényl-3 oxo-2 oxathiazolidine-1,3,2

A complete analysis of the ¹H NMR spectrum of the title compound is used for the conformational assignment of the molecule in the C-4—C-5 region. The position of protons is related to the position of the S?O bond with the help of a europium complex Eu(fod)₃. The results obtained are consistent with those found for similar compounds with or without a phosphorus atom.     

Investigation of pyrite oxidation by hexavalent chromium: solution species and surface chemistry

Pyrite oxidation processes by aqueous Cr(VI) were investigated at 25 degrees C under an argon atmosphere. Synthetic pyrite suspensions (6 g L(-1)) were reacted for 20 h with a range of Cr(VI) solutions from 0 to 700 microM and at pH 2-12. The main objective of this work was to investigate the reaction mechanisms by emphasizing the role of sulfur species. Aqueous chemical processes were well illustrated in acidic media where significant amounts of sulfate and iron species were determined. Sulfate anions are the final stable sulfur species involved in the reaction pathway. Experiments showing complete Cr(VI) removal from solution displayed ratios [S(VI)]/[Fe](tot)<2, probably due to a deficit in aqueous sulfur species. Experiments showing incomplete Cr(VI) removal displayed ratios [Cr(VI)](removed)/[S(VI)] close to 1.5. This ratio was found to be consistent with the formation of thiosulfate (S(2)O(2-)(3)). Thiosulfate ions disproportionated into elemental sulfur S(0) and tetrathionate ions (S(4)O(2-)(6)) that were finally oxidized to sulfate anions under acidic conditions. The distribution of the oxidation state of sulfur atoms at the pyrite surface determined by XPS was additional evidence for the multistep sulfur oxidation process. The presence of elemental sulfur in the S(2p) spectra correlated well with the disproportion of thiosulfate under acidic conditions.     

Stepwise solvation of an amino acid: the appearance of zwitterionic structures

How many solvent molecules are required to solvate an amino acid? This apparently simple question, which relates to the number of solvent molecules necessary to change the amino acid from its gas-phase neutral structure to the zwitterionic solvated structure, remains unanswered to date. Here we present experimental and theoretical (density functional theory: B3LYP/6-31+G**) infrared spectra for tryptophan-watern complexes where n = 1-6, which suggest that the zwitterionic structure becomes competitive in energy at the high end of the series. Compelling evidence for a gradual transition to zwitterionic structures comes from tryptophan-methanol complexes up to n = 9. Starting from n = 5, the infrared spectra show increasing intensity in the diagnostic asymmetric COO- stretch and in the weaker NH3+ bending modes as the cluster size increases. Moreover, convergence toward the Fourier transform infrared spectrum of a solution of tryptophan in methanol is clearly observed. For small solvent complexes (n = 1-4), the microsolvation by methanol and water is shown to behave very similarly. A detailed comparison of the experimental and the theoretical spectra allows us to determine both the preferred solvent binding sites on the amino acid and the evolution of conformational structures of tryptophan as the number of attached solvent molecules increases.     

Use of porous graphitic carbon for the analysis of nitrate ester, nitramine and nitroaromatic explosives and by-products by liquid chromatography-atmospheric pressure chemical ionisation-mass spectrometry

A new LC/MS method was developed for the analysis of sixteen different analytes including the most common organic explosives encountered in forensic investigations. The separation was achieved using a porous graphitic carbon (PGC) column with a binary gradient elution. Molecular modeling suggested a possible interpretation for the elution order of explosive compounds on PGC. The introduction of ammonium formate in the mobile phase resulted in the formation of characteristic adduct ions thus enhancing the mass spectrometric detection of nitrate ester and nitramine compounds. Atmospheric pressure chemical ionization (APCI) and electrospray ionization (ESI) were compared in terms of sensitivity. The final LC/APCI-MS method allowed easy identification of investigated compounds with limits of detection ranging from 0.04 to 1.06 ng/microl. The analysis of simulated forensic samples confirmed the performance of the method.     

Parallel synthesis and yeast growth inhibition screening of succinamic acid libraries

Libraries of succinamic acid derivatives resulting from the condensation of a series of succinic acid derivatives with amines are reported as putative khafrefungin analogues. A total of 480 compounds derived from the initial condensation of 8 scaffolds with 60 different amines have been synthesized using automated technology with the help of scavenger resins. A simple acetate hydrolysis of five of the above sublibraries afforded additional 300 compounds for a total of 780 compounds. Around 55% of the library members showed purities higher than 70% (HPLC-ELS-MS) thus proving the generality of this approach. Results on growth inhibition of the yeast Saccharomyces cerevisiae in the presence of selected library members are also reported as a preliminary evaluation of the antifungal activity.     

Solid-state NMR on a large multidomain integral membrane protein: the outer membrane protein assembly factor BamA

Multidomain proteins constitute a large part of prokaryotic and eukaryotic proteomes and play fundamental roles in various physiological processes. However, their structural characterization is challenging because of their large size and intrinsic flexibility. We show here that motional-filtered high-resolution solid-state NMR (ssNMR) experiments allow for the observation and structural analysis of very large multidomain membrane proteins that are characterized by different motional time scales. This approach was used to probe the folding of the 790-residue membrane protein BamA, which is the core component of the Escherichia coli outer membrane protein assembly machinery. A combination of dipolar- and scalar-based two-dimensional ssNMR experiments applied to two uniformly (13)C,(15)N-labeled BamA variants revealed characteristic secondary structure elements and distinct dynamics within the BamA transmembrane protein segment and the periplasmic POTRA domains. This approach hence provides a general strategy for collecting atomic-scale structural information on multidomain (membrane) proteins in a native-like environment.