Alpha,beta-D-CNA induced rigidity within oligonucleotides

Introduction of alpha,beta-D-CNA featuring canonical values of the torsional angles alpha and beta within oligonucleotides leads to an overall stabilization and improved rigidity of the duplex DNA as demonstrated by UV experiments, circular dichroism and corroborated by molecular dynamics simulations.     

The influence of structure and composition of a reverse SDS microemulsion on enzymatic activities and electrical conductivities

The activity of the enzyme horse radish peroxidase (HRP) is studied in a series of reverse microemulsions composed of dodecane, aqueous buffer, sodium dodecylsufate (SDS) and alcohols of the homologous series 1-butanol to 1-octanol. The HRP catalyzed reaction is the oxidation of a classical water soluble substrate, the 2,2-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS) by hydrogen peroxide. In parallel electrical conductivity measurements are performed on the same solutions. The structural changes in the microemulsions, as inferred by the conductivity measurements, correlate remarkably well with the changes in the enzymatic activities. In particular it is found that (a) the maximum activity of the enzyme is always related to its optimum hydration and that this hydration can be related to the microemulsion structures, (b) the enzyme inhibition caused by the alcohols in microemulsions is a consequence of both the solubility of the alcohols in the buffer and the rigidity of the interfacial film. Consequently, it can be concluded that enzymatic activity measurements are a valuable tool to study confined systems such as microemulsions and, in particular, the amount of available hydration water. Enzymatic activities can be finely tuned by small changes in microemulsion structures, probably in a predictive way.     

Biotic and abiotic experimental identification of bacterial influence on calcium isotopic signatures

In this study, we tested experimentally the influence of plant and bacterial activities on the calcium (Ca) isotope distribution between soil solutions and plant organs. Abiotic apatite weathering experiments were performed under two different pH conditions using mineral and organic acids. Biotic experiments were performed using either apatite or Ca-enriched biotite substrates in the presence of Scots pines, inoculated or not with the rhizosphere bacterial strain Bulkholderia glathei PML1(12), or the B. glathei PML1(12) alone. For each experiment, the percolate was collected every week and analyzed for Ca concentrations and Ca isotopic ratios. No Ca isotopic fractionation was observed for the different abiotic experimental settings. This indicates that no Ca isotopic fractionation occurs during apatite dissolution, whatever the nature of the acid (mineral or organic). The main result of the biotic experiments is the 0.22 ‰ (44)Ca enrichment recorded for a solution in contact with Scots pines grown on the bacteria-free apatite substrate. In contrast, the presence of bacteria did not cause Ca isotopic fractionation of the solution collected after 14 weeks of the experiments. These preliminary results suggest that bacteria influence the Ca isotopic signatures by dissolving Ca from apatite more efficiently. Therefore, Ca isotopes might be suitable for detecting bacteria-mediated processes in soils.     

Characterization of cationic copolymers by capillary electrophoresis using indirect UV detection and contactless conductivity detection

For many industrial applications, the combination of two different monomers in statistical or diblock copolymers enhances the properties of the corresponding polymer. However, during the polymerization reaction, homopolymers might be formed and can influence the properties for the applications. Consequently, the separation and the quantification of the homopolymers contained in copolymer samples are crucial. In addition, the charge density distribution of the statistical copolymer is an important characteristic for the applications. The purpose of this work was to study the characterization of a statistical copolymer of acrylic acid (AA) and diallyldimethyl ammonium chloride (DADMAC) by capillary electrophoresis (CE) in acidic conditions (cationic copolymers). For that purpose, a free solution electrophoretic separation was carried out according to the charge rate (chemical composition) independently of the molar mass. The second objective was to compare contactless conductivity detection and indirect UV absorbance modes for the quantification of DADMAC homopolymers present in copolymer samples. Different coated capillaries based on neutral or positively charged modification were also compared. The comparison of indirect absorbance UV and contactless conductimetric detection demonstrated that both detection modes can be used for a complete CE characterization of non-UV absorbing PAA-DADMAC copolymers.     

Validation interlaboratory trial for ISO 12010: Water quality—Determination of short-chain polychlorinated alkanes (SCCP) in water

A validation interlaboratory trial was carried out to prepare ISO 12010: Water quality??Determination of short-chain polychlorinated alkanes (SCCP) in water??Method using gas chromatography/mass spectrometry (GC-MS) and electron capture negative ionisation (ECNI). The task was to determine the sum of short-chain polychlorinated n-alkanes with carbon chain lengths of C₁₀?CC₁₃ and a chlorine content between 49% (g/100?g) and 67% (g/100?g) in water by GC-ECNI-MS. The quantification had to be performed by multiple linear regression as described in ISO/DIS 12010, the compulsory method. Samples distributed were real river samples, and waste water spiked with a target concentration of 0.4 and 0.6???g/L for the sum of SCCPs, i.e. a concentration around the environmental quality target level according to the European Water Framework Directive. The different types of water samples tested were surface water with <150?mg/L suspended matter, surface water with 0.5?g/L suspended matter, and filtered waste waster. The interlaboratory trial included the extraction of the water samples, a column chromatographic clean up, a concentration step, and integration of chromatographic unresolved complex mixtures as well as the calibration and quantification by multiple linear regression. The reproducibility standard deviation of the standard concentration was 11.9%. Reproducibility standard deviations of concentrations in the three different water samples between 27.8 and 34.2% were achieved by 10?C12 participating laboratories from six countries.     

Interaction between GUVs and catanionic nanocontainers: new insight into spontaneous membrane fusion

Spontaneous receptor-free membrane fusion with pure lipid systems, used as a cell membrane model, is demonstrated with easy-to-handle lactose-derived catanionic vesicles. This fusion, mediated and controlled by phospholipids, emphasizes the great value of these nanovesicles for enhanced direct cytosolic drug delivery without the shortcomings linked with endocytic pathways.     

Corrosion protection by sonoelectrodeposited organic films on zinc coated steel

A variety of coatings based on electrosynthesized polypyrrole were deposited on zinc coated steel in presence or absence of ultrasound, and studied in terms of corrosion protection. Cr III and Cr VI commercial passivation were used as references. Depth profiling showed a homogeneous deposit for Cr III, while SEM imaging revealed good surface homogeneity for Cr VI layers. These chromium-based passivations ensured good protection against corrosion. Polypyrrole (PPy) was also electrochemically deposited on zinc coated steel with and without high frequency ultrasound irradiation in aqueous sodium tartrate-molybdate solution. Such PPy coatings act as a physical barrier against corrosive species. PPy electrosynthesized in silent conditions exhibits similar properties to Cr VI passivation with respect to corrosion protection. Ultrasound leads to more compact and more homogeneous surface structures for PPy, as well as to more homogeneous distribution of doping molybdate anions within the film. Far better corrosion protection is exhibited for such sonicated films.     

Cascade reactions forming highly substituted, conjugated phospholes and 1,2-oxaphospholes

More than just a carbon copy: The reaction of a phospha-Wittig-Horner reagent with diacetylenic ketones (see scheme) results in a cascade of reactions that can lead to both an oxaphosphole-terminated cumulene system and an alkene-bridged bis-phosphole. The reaction outcome is determined by the nature of the acetylene termini, with phenyl groups stabilizing a carbene intermediate that dimerizes to give the bis-phosphole product.     

Effect of temperature on the retention of ionizable compounds in reversed-phase liquid chromatography: application to method development

The analysis of pharmaceutical compounds is often a difficult challenge which requires mathematical tools to improve the quality of the separation method. This work is an attempt to rationalize the anomalous variation of the logarithm of the retention factor with temperature in case of ionizable compounds. The effect of temperature on ionizable compounds was studied within a large range of temperature, ranging from 30 to 130 degrees C. The determination of the so-called chromatographic pKa and the study of its variation with temperature allow to explain why the forms of the van't Hoff curves are so different depending on the type of solute, the type of buffer and the type of the mobile phase. A retention model along with a computation procedure is proposed to optimize both temperature and mobile phase composition and to provide good and robust conditions as shown by illustrative examples.     

Ex vivo fluorescence imaging of normal and malignant urothelial cells to enhance early diagnosis

Urinary cytology is a noninvasive and unconstraining technique for urothelial cancer diagnosis but lacks sensitivity for detecting low-grade lesions. In this study, the fluorescence properties of classical Papanicolaou-stained urothelial cytological slides from patients or from cell lines were monitored to investigate metabolic changes in normal and tumoral cells. Time- and spectrally-resolved fluorescence imaging was performed at the single cell level to assess the spectral and temporal properties as well as the spatial distribution of the fluorescence emitted by urothelial cells. The results reveal quite different fluorescence distributions between tumoral urothelial cells, characterized by a perimembrane fluorescence localization, and the normal cells which exhibit an intracellular fluorescence. This is not caused by differences in the fluorescence emission of the endogenous fluorophores NAD(P)H, flavoproteins or porphyrins but by various localization of the EA 50 Papanicolaou stain as revealed by both the spectral and time-resolved parameters. The present results demonstrate that the use of single-cell endofluorescence emission of Papanicolaou-stained urothelial cytological slides can allow an early ex vivo diagnosis of low-grade bladder cancers.