DNA LESIONS AND DNA DEGRADATION IN MOUSE LYMPHOMA L5178Y CELLS AFTER PHOTODYNAMIC TREATMENT SENSITIZED BY CHLOROALUMINUM PHTHALOCYANINE

Two closely related strains of mouse lymphoma L5178Y cells, LY-R and LY-S, have been found to differ in their sensitivity to the cytotoxic effects of photodynamic treatment (PDT) with chloroaluminum phthalocyanine (CAPC) and red light. Strain LY-R is more sensitive to photodynamic cell killing than strain LY-S. Differences in uptake of CAPC could not account for the differences in cytotoxic effects. There was no marked difference between the two strains in the induction of single-strand breaks (which includes frank single-strand breaks and alkali-labile lesions), but substantially more DNA-protein cross-links were formed in strain LY-R by CAPC and light. Repair of single-strand breaks proceeded with similar kinetics in both strains for the first 30 min post-irradiation, suggesting that these lesions are not responsible for the differential sensitivity of the two strains to the lethal effects of photodynamic treatment. Thereafter, alkaline elution revealed the presence of increasing DNA strand breakage in strain LY-R. DNA degradation, as measured by the conversion of prelabeled [14C] DNA to acid-soluble radioactivity, was more rapid and extensive in strain LY-R.     

Polarization model for poorly-organized interfacial water: hydration forces between silica surfaces

The main goal of this paper is to review the theoretical models which can be used to describe the interactions between silica surfaces and to show that a model proposed earlier by the authors (the polarization model), which accounts concomitantly for double layer and hydration forces, can be adapted to explain recent experiments in this direction. When the water molecules near the interface were considered to have an ice-like structure, a strong coupling between the double layer and hydration forces (described by the correlation length between neighboring dipoles, lambda(m)) generates long range interactions, larger than the experimentally determined interactions between silica surfaces. Arguments are brought that a gel layer is likely to be formed on the surface of silica, which, by generating disorder in the interfacial water layers, can decrease strongly the value of lambda(m). Since the prediction of lambda(m) involves a choice for the microscopic structure of water, which is often unknown, the polarization model is also presented here as a phenomenological theory, in which lambda(m) is used as a fitting parameter. Two extreme cases are considered. In one of them, the water molecules near the interface are considered to have an ice-like structure, whereas in the other they are considered randomly distributed. In the first case, the dipole correlation length lambda(m)=14.9 Angstrom. In the second limiting case, lambda(m) can be of the order of 1 Angstrom. It is shown that, for lambda(m)=4 Angstrom, a more than qualitative agreement with the experiment could be obtained, for reasonable values of the parameters involved (e.g. surface dipole strength and density, dipole location, surface charge).     

Ab initio calculation of the potential energy surface for the large-amplitude bending and symmetric stretching vibration in the electronic ground state of XeF2

A two-dimensional symmetric stretching-bending potential surface for the electronic ground state of the XeF₂ molecule has been computed by means of self-consistent field and multi-reference configuration interaction methods. At the correlated level of treatment it is found that the linear nuclear arrangement of XeF₂ with XeF bond distances close to 200 pm corresponds only to a local minimum on the potential energy surface separated from the dissociation products Xe + 2F by a high energy barrier. The results of a vibrational analysis study enable a reliable reproduction and interpretation of available experimental data concerning the infrared spectrum of the molecule.     

Subcritical and fatigue crack growth in anti-plane strain state

Assuming elastic-plastic material behavior the slow growth of Mode III crack under both monotonic and pulsating loadings is considered. Rice's idea of universal R-curve is employed while the mathematical analysis is based on the one-dimensional plasticity model suggested by Kostrov and Nikitin. Motion of a quasi-static Mode III crack is studied and the stable/unstable transition points are found through application of the final stretch failure condition proposed in 1972 by Wnuk. A logarithmic formula for fatigue crack extension rate is derived. Results are compared to other well-known solutions.     

Study of diamond film nucleation by ultrasonic seeding in different solutions

In this study we have investigated diamond nucleation on Si substrates by ultrasonic seeding with different liquid solutions of Ultradispersed Detonation Diamond (UDD) powder in a mixture of metal nano- or microparticles (Ni, Co, Y). The influence of different solutions on nucleation efficiency was investigated. For highlighting nucleation centers and better evaluation of the nucleation process the nucleated samples were moved into a Microwave Plasma Enhanced Chemical Vapor Deposition (MW CVD) reactor and a ”short-time” (10 min), then followed by a ”long-time” (+1 hour), diamond deposition was performed. The morphology of samples was characterized by Scanning Electron Microscopy (SEM) and the chemical composition of grown diamond layer was investigated by Raman Spectroscopy. From the measurements we found out that microsized metal particles positively influenced nucleation and the uniformity of the deposited diamond thin film. The lowest surface roughness was achieved in the case of nanodiamond powder mixed with Co and Y metal powder. The influence of Ni, Co and Y to the nucleation and early growth stage are discussed.     

Synchronous parallel kinetic Monte Carlo for continuum diffusion-reaction systems

A novel parallel kinetic Monte Carlo (kMC) algorithm formulated on the basis of perfect time synchronicity is presented. The algorithm is intended as a generalization of the standard n-fold kMC method, and is trivially implemented in parallel architectures. In its present form, the algorithm is not rigorous in the sense that boundary conflicts are ignored. We demonstrate, however, that, in their absence, or if they were correctly accounted for, our algorithm solves the same master equation as the serial method. We test the validity and parallel performance of the method by solving several pure diffusion problems (i.e. with no particle interactions) with known analytical solution. We also study diffusion-reaction systems with known asymptotic behavior and find that, for large systems with interaction radii smaller than the typical diffusion length, boundary conflicts are negligible and do not affect the global kinetic evolution, which is seen to agree with the expected analytical behavior. Our method is a controlled approximation in the sense that the error incurred by ignoring boundary conflicts can be quantified intrinsically, during the course of a simulation, and decreased arbitrarily (controlled) by modifying a few problem-dependent simulation parameters.     

A semi-empirical approach to determine gamma activities in environmental cylindrical samples

A semi-empirical method to determine radionuclide concentrations in large environmental samples without the use of reference material and avoiding the typical complexity of Monte-Carlo codes is proposed. The calculation of full-energy peak efficiencies was carried out from a relative efficiency curve (obtained from the gamma spectra data), and the geometric (simulated by Monte-Carlo), absorption, sample and intrinsic efficiencies for energies between 130 and 3000 keV. The absorption and sample efficiencies were determined from the mass absorption coefficients, whereas the intrinsic efficiency was approximated by an empirical function. The deviations between calculated and experimental efficiencies for a reference material in most cases are less than 10%. Radionuclide activities in marine sediment samples calculated by the proposed method and by the experimental comparative method were not significantly different. This new method can be used for routine environmental monitoring when uncertainties up to 10% are acceptable.     

Four-Body Bound-States Systems in Relativistic Scalar Quantum Field Theory: Variational Basis-State Approach

The variational method within the Hamiltonian formalism of quantum field theory has been used in order to investigate the effect of virtual pairs for four-body scalar systems consisting of two particles and two antiparticles of the same mass. The scalar particles and antiparticles interact via a massive or massless mediating scalar field. The ground state energy solutions of Fock-space variational trial states (\(|N{\bar {N}}N{\bar {N}}{ \rangle }+|N{\bar {N}}N{\bar {N}}N{\bar {N}\rangle }\)) of the relativistic wave equations have been studied. We have compared these results with the previous work of four-body system (variational trial states of the form \(|N{ \bar {N}}N{\bar {N}}{\rangle }\)) and we have shown that the inclusion of virtual pairs has a noticeable effect at low coupling and at high coupling the energy of the system is changed by an important amount. In other words, the calculations show that the inclusion of virtual pairs augments the binding energy of the four-body system by a substantial amount at strong coupling. This study can pave the way for some new ideas in order to investigate the effect of virtual pairs, for example, for a bound-states quark-antiquark or tetraquark systems in future.