Primate beta-defensins--structure, function and evolution

Host defense peptides (HDPs) are endogenous antibiotics that play a multifunctional role in the innate immunity of mammals. Among these, beta-defensins contribute to mucosal and epithelial defense, also acting as signal molecules for cellular components of innate and adaptive immunity. Numerous members of this family have been identified in mammalian and avian species, and genomic studies in human and mouse indicate a considerable complexity in their gene organization. Recent reports on the evolution of primate and rodent members of this family indicate quite a complex pattern of variation. In this review we briefly discuss the evolution of mammalian beta-defensins in relation to other types of defensins, and then concentrate on the evolution of beta-defensins 1 to 4 in primates. In particular, the surprisingly varied patterns of evolution, which range from neutral or weakly purifying, to positive selection to a high level of conservation are analyzed in terms of possible genetics, structural or functional implications, as well as to observed variations on the antimicrobial activity in vitro. The role of polymorphisms in the genes encoding for these host defense peptides in determining susceptibility to human diseases are also briefly considered.     

Effects of Aerosol-OT reversed micelles in carbon tetrachloride on acid-base indicator equilibria

ApparentpK _a values of thymol blue solubilized in Aerosol-OT reversed micelles in carbon tetrachloride at 25 °C were determined spectrophotometrically. The effects of the Aerosol-OT concentration and the (water)/(surfactant)R ratio were investigated. The apparentpK _a values increase as a function of increasing (R). All the measuredpK _a values are less than that in water. The decrease ranges from 1.23 units (detergent=0.4 M,R=1.39) to 0.42 units (Aerosol-OT=0.6 M,R=9,25). These results are rationalized in terms of decreased hydronium ion activity in the micellar core due to its binding to the detergent SO₃ ^? groups.     

Preparation of cellulose samples for size-exclusion chromatography analyses in studies of paper degradation

Hydrolytic degradation of cellulose was shown to take place during the activation procedure in distilled water during the dissolution procedure of cellulose samples from papers for size-exclusion chromatography analyses in the lithium chloride-N,N-dimethylacetamide (DMAc) solution system. The use of dilute aqueous sodium hydroxide solution in the activation procedure prevents hydrolytic degradation of cellulose during the dissolution procedure, especially in the case of samples of aged papers with low pH. The use of the freeze-drying technique provides samples of cellulose ready-made for dissolution in lithium chloride-N,N-dimethylacetamide solution.     

Copolymerization of ethylene and non-conjugated diene using homogenous catalyst

Ethylene and different amounts of 1,7-octadiene were copolymerized using the metallocene catalyst system ethylidene-bis(fluorenyl) zirconium dichloride and methylaluminoxane (MAO) at both 50 and 90 °C. The catalyst activity has slightly increased with the addition of low amounts of the diene in relation to the homopolymerization of ethylene. The obtained polymers were characterized according to their melting temperature (T_m) and crystallinity degree (x_c) by differential scanning calorimetry (DSC). Weight-average molecular weight (M_w) and polydispersity were determined by gel permeation chromatography (GPC). Diene contents in the copolymer were obtained through the FTIR spectroscopy. The results indicated that at polymerization temperature of 90 °C, crosslinking bonds in the obtained copolymers were low, differently from what was observed at 50 °C. The diene content in the copolymer achieved more than 3 mol% and the comonomer conversion was around 15%. Moreover, the obtained copolymers have M_w around 100,000 and large polydispersity.     

Proton controlled intramolecular communication in dinuclear ruthenium(II) polypyridine complexes

The synthesis and characterization of two dinuclear ruthenium polypyridyl complexes based on the bridging ligands 5,5'-bis(pyridin-2' '-yl)-3,3'-bis(1H-1,2,4-triazole) and 5,5'-bis(pyrazin-2' '-yl)-3,3'-bis(1H-1,2,4-triazole) and of their mononuclear precursors are reported. The dinuclear compounds have been prepared by a Ni(0) catalyzed coupling of a mononuclear ruthenium(II) polypyridyl complex containing a brominated triazole moiety. Electrochemical and photophysical studies indicate that, in these dinuclear complexes, the protonation state of the bridge may be used to tune the intercomponent interaction between the two metal centers and that these species act as proton driven three-way molecular switches that can be read by electrochemical or luminescence techniques.     

Non-linear dielectric effect in the acetone-benzene and acetophenone-benzene systems

The non-linear dielectric effect has been studied for acetone and acetophenone, and their solutions in benzene. With the NDE results obtained in this work and the dielectric polarization calculated from literature values of the permittivity, density and refractive index, the mean values of the square and the fourth power of the dipole moment were calculated. Assuming dipolar association of the acetone and acetophenone molecules to be restricted to dimerization, the Gibbs free energy ΔG^o of the dimerization process is determined.     

Microgravimetric study of electrochemically controlled nucleophilic addition of sulfite to polyaniline

The sulfonation of polyaniline (PANI) films by nucleophilic addition of sulfite ion has been controlled through the polymer oxidation state under electrochemical control. The process was monitored by in situ electrochemical quartz crystal microbalance (EQCM), and the polymer oxidation was accomplished by electrode potential steps in sulfite aqueous solutions. The nucleophilic addition of sulfite to PANI only takes place on the oxidized polymer. From the ratio of added mass to the injected charge, the degree of sulfonation has been obtained with a yield as high as 50%. It has been observed that the ion-exchange mechanism during the oxidation-reduction process in the resulting sulfonated polymer is analogous to the polymer produced by electrophilic sulfonation of polyaniline or by copolymerization of aniline with aminosulfonic acids, unlike the ionic exchange observed for unmodified PANI.     

Molecular dynamics simulations of a nucleoside analogue of 1,4-dihydro-4-oxoquinoline-3-carboxylic acid synthesized as a potential antiviral agent: Conformational studies in vacuum and in water

Conformational analysis of nucleosides may have direct applications to the structure–activity relationship (SAR) studies and in the design of new drug candidates. Although conformational analysis may be accessed in many different ways, in this work it was performed using molecular dynamics (MD) simulation in order to study the dynamic behavior of a nucleoside derivative of 1,4-dihydro-4-oxoquinoline-3-carboxylic acid, synthesized by our group as a potential antiviral agent. The MD simulation was carried out during 10 ns in vacuum and in a box of water at two different temperatures (i.e., 300 and 600 K) using the AMBER force field. The in vacuum MD simulation results are in agreement with the crystallographic structure and with the DFT calculations of the nucleoside, revealing the anti conformer as the more stable one. The simulation in water, however, shows that both conformers may exist at 300 K, the temperature of the in vivo and in vitro assays, revealing that both the syn and anti conformers should be considered in a MD simulation study of the inhibitor–enzyme complex. Simulations are also in agreement with the NOE experiment, which shows that the anti conformer is the preferential one in DMSO-d6 solution at 298 K.     

Micro/nano-fibrillated cellulose (MFC/NFC) fibers as an additive to maximize eucalyptus fibers on tissue paper production

Tissue furnish optimization plays a key role in enhancing tissue properties, making the process cost-effective. Typically, this furnish is composed of a mixture of hardwood eucalyptus fibers (HW) and softwood (SW) fibers, which ensure strength and tissue machine runnability. However, the tissue paper production with the maximization of eucalyptus fibers achieves softer papers at less cost, since SW fibers are often more expensive than HW fibers. From this perspective, this study aims to investigate the effect of micro/nano-fibrillated cellulose (MFC/NFC) as an additive, on structural, softness, strength, and water absorption properties of tissue papers, promoting partial or total removal of SW fibers to produce 100% eucalyptus materials. MFC/NFC was characterized in terms of morphological, chemical, and water interaction properties. The results showed that MFC/NFC presents a high bonding surface area, high carboxyl group content and, when incorporated into tissue furnishes, it promotes strong inter-fiber bonds. This evidence was also supported by SEM image analysis methods and FTIR. Additionally, laboratory tissue handsheets with low basis weight were produced and used in the characterization assays. Overall, the results indicated that MFC/NFC improved strength, at the expense of bulk, porosity, softness, and absorption properties. Compared to typical industrial furnish mixtures (75%HW?+?25%SW), MFC/NFC enhanced the production of bulkier, porous, and softer structures, but with reduced strength and absorption. It was possible to optimize the furnish composition by using fiber modeling to obtain 3D structure computation simulations with predictive capability. The MFC/NFC proved to be a high-quality additive to improve softness and strength properties.

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A boxmodel development to study the relationships between the photo-oxidants and the particles formation in the troposphere

The model BAGS (Boxmodel for Aerosol and Gasphase Simulations) has been developed. It is composed of two major modules: the first one describes the system of the chemical reactions in the gaseous phase, the second one calculates the aerosol chemical composition and the dimensional distribution of the particles. The boxmodel has been developed with the introduction of new chemical and physical processes, not previously included, in particular the formation of Secondary Organic Aerosol. The other implemented processes are a module for the dynamic of the particle population, nucleation, coagulation and dry deposition. The last phase of the work has been a check of the BAGS capabilities by a series of tests, that have permitted to compare it with other models (MAPS and MADM). The tests in particular have concerned the aerosol water content prediction, the photochemistry, the condensation of the inorganic compounds and the formation of Secondary Organic Aerosol.