Electron transfer across modular oligo-p-phenylene bridges in Ru(bpy)2(bpy-ph(n)-DQ)4+ (n = 1-5) dyads. Unusual effects of bridge elongation

A series of dyads of general formula Ru(bpy)(2)(bpy-ph(n)-DQ)(4+) (n = 1-5), based on a Ru(II) polypyridine unit as photoexcitable donor, a set of oligo-p-phenylene bridges with 1-5 modular units, and a cyclo-diquaternarized 2,2'-bipyridine (DQ(2+)) as electron acceptor unit, have been synthesized. Their spectroscopic and photophysical properties have been investigated in CH(3)CN and CH(2)Cl(2) by time-resolved emission and absorption spectroscopy in the nanosecond and picosecond time scale. The experimental study has also been complemented with a computational investigation carried out on the whole series of dyads. The absorption spectra of the dyads show new spectroscopic transitions, in addition to those characteristic of the donor, bridge, and acceptor fragments. DFT calculations suggest the assignment of such bands as bridge-to-acceptor (π ph(n)) → (π* DQ) charge-transfer transitions. This assignment is consistent with the solvatochromic and spectroelectrochemical behavior of the new bands. For all the dyads at room temperature in fluid solution, the typical (3)MLCT luminescence of the Ru(II) polypyridine unit is strongly (>90%) quenched, supporting the occurrence of an efficient intramolecular photoinduced electron transfer. The study has revealed, however, that the photophysical mechanism is actually more complex than presumed on the basis of a simple photoinduced electron-transfer scheme. For n = 1, very fast (few picoseconds) photoinduced electron transfer from the MLCT state localized on the substituted bpy ligand to the DQ unit has been observed, followed by slower interligand hopping and charge recombination. For n = 2-5, MLCT excited-state quenching takes place without transient detection of charge-separated product, indicating that charge recombination is faster than charge separation. This behavior can be rationalized in terms of the superexchange couplings expected through this type of bridges for the two processes. The kinetics of MLCT quenching in the dyads with n = 1-5 does not follow the usual exponential falloff with bridge length: after a regular decrease for n = 1-3, the rate constants become almost insensitive to bridge length for n = 3-5. The rationale of this uncommon behavior, as suggested by DFT calculations, lies in a switch in the MLCT quenching mechanism with increasing bridge length, from oxidative quenching by the DQ acceptor to reductive quenching by the bridge.     

Role of the third strand in the binding of proflavine and pt-proflavine to poly(rA).2poly(rU): a thermodynamic and kinetic study

The interactions of triple strands of poly(rA).2poly(rU) with proflavine (PR) and the proflavine cis-platinum derivative [{PtCl (tmen)} 2{NC 13H 7(NCH 2CH 2) 2}] (+) (PRPt) are examined at pH 7.0, T = 25 degrees C, and 0.2 M ionic strength by spectrophotometry, spectrofluorometry, circular dichroism, viscosimetry, stopped-flow, and T-jump relaxation techniques. The melting experiments demonstrate that both drugs tend to destabilize the triplex structure, although the PRPt effect is more relevant. By contrast, both drugs tend to slightly stabilize the duplex structure. The viscosity and circular dichroism measurements show that, at a low dye-to-polymer ratio ( C D/ C P), the binding is intercalative, whereas at high C D/ C P values, the external binding dominates. The binding kinetics and equilibria have been investigated over the C D/ C P region, where intercalation is operative. Both drugs bind to the RNA triplex according to the excluded site model. With PR, two kinetic effects have been observed, whereas with PRPt, only one has been observed. The results are interpreted according to the reaction schemes D + S right arrow over left arrow DS I, with PRPt, and D + S right arrow over left arrow DS I right arrow over left arrow DS II, with PR. The electrostatic contribution to the formation activation energy for DS I is similar (40%) for both systems. The results suggest that DS I is a partially intercalated species. Absence of the second step with PRPt is put down to groove interaction of the Pt-containing moiety, which prevents the PR residue from further penetration through the base pairs to form the fully intercalated complex, DS II. Comparison with the binding of the same drugs to the duplex reveals that the occupation of the major groove in poly(rA).2poly(rU) by the third strand plays a critical role in the kinetic behavior.     

Adsorption of Naphthalene and Quinoline on Pt,Pd and Rh: A DFT Study

The adsorption of naphthalene and quinoline on Pt(111), Pd(111) and Rh(111) surfaces is studied using density functional theory. The metal surfaces are simulated by means of large confined clusters and for Pt by means of a slab with periodic boundary conditions (PBC). Calculation parameters such as basis set convergence, basis set superposition error and effects of cluster relaxation and size are analyzed in order to assess the aptness of the cluster model. For all the metals, the preferred sites of adsorption are analyzed, thus revealing their different behaviors concerning structure and stability of adsorption modes. On Pt, the molecules have the richest theoretical configurational variety. Naphthalene and quinoline are found to adsorb preferentially on di‐bridge[7] sites on the three metals, and Rh exhibits higher adsorption energies than Pt and Pd. Structural features of the adsorbed molecules are correlated to the calculated adsorption energies. The di‐bridge[7] adsorption modes are studied in deeper detail decomposing the adsorption energies in two terms arising from molecular distortion and binding interaction to the metal. Molecular distortion is correlated to the HOMO–LUMO energy gap. The larger adsorption energies found for interactions with Rh result from the lower contribution of the distortion term. Binding interactions are described by analyzing the wave functions of naphthalene and quinoline adsorbed on a subunit of the large clusters in order to reduce the complexity of the analysis. Molecular orbitals are studied using concepts of Frontier Molecular Orbitals theory. This approach reveals that in the adsorption of naphthalene and quinoline on Pt and Pd, an antibonding state lies below the Fermi energy, while on Rh all antibonding states are empty, in agreement with the larger interaction energies. In addition, further insight is gained by projecting the density of states on the d band of the clean surfaces and of the adsorbed systems. This results in the rationalization of the structural features in terms of the concepts of electronic structure theory. The distributions of electronic density are described by means of Hirshfeld charges and isosurfaces of differential electron density. The net electron transfer from the metals to the molecules for most of the sites correlates with the trends of the adsorption energies.     

Route to metallacrowns: the mechanism of formation of a dinuclear iron(III)-salicylhydroxamate complex

The equilibria and the kinetics of the binding of Iron(III) to salicylhydroxamic (SHA) and benzohydroxamic (BHA) acids have been investigated in aqueous solution (I = 1 M (HClO(4)/NaClO(4)), T = 298 K) using spectrophotometric and stopped-flow methods. Whereas Iron(III) forms a 1:1 complex (ML) with BHA, it forms both ML and M(2)L complexes with SHA. The presence of M(2)L in aqueous medium is corroborated by FTIR measurements. The reactive form of Iron(III) is the hydrolyzed species FeOH(2+), which binds to the O,O site in ML and to the O,O and O(P),N (P = phenolate) sites in M(2)L, inducing full deprotonation of the latter. The reaction pathway is discussed in terms of a multistep mechanistic scheme in which the metal-ligand interaction is coupled to hydrolysis and self-aggregation steps of Iron(III). The observation and characterization of M(2)L as a stable species is important because it contains the -Fe-O-N-Fe- sequence, which constitutes the repetitive motif of the SHA-based metallacrown ring and provides the rationale for 12-MC-4 metallacrowns. In the framework of this study, the kinetics of the Iron(III) dimerization and trimerization have also been investigated using the stopped-flow method to perform dilution jumps. The reaction scheme put forward involves two parallel steps (FeOH(2+) + FeOH(2+) and Fe(3+) + FeOH(2+)) that lead to formation of the Fe(2)(OH)(2)(4+) dimer and a slower step (FeOH(2+) + Fe(2)(OH)(2)(4+)) to form the trimer species. The kinetics of the last step have been investigated here for the first time, and the results deduced indicate that, of the two possible trimer structures reported in the literature, Fe(3)(OH)(3)(6+) and Fe(3)(OH)(4)(5+), the latter prevails by far.     

Room-temperature continuous-wave operation of an external-cavity quantum cascade laser

Room-temperature, continuous-wave operation of an external-cavity quantum cascade laser (EC-QCL) is reported. Single-mode tuning range of 120 cm(-1) was achieved, from 7.96 to 8.84 microm. The gain chips utilized are based on the bound to continuum design and were fabricated as buried heterostructure lasers. Gap-free tuning (mode hops only on the external-cavity modes) is demonstrated for an antireflection-coated laser, just by grating rotation. The EC-QCL was implemented in a Littrow setup and an average power of 1.5 mW was obtained at 20 degrees C, while a peak power of 20 mW was obtained for a modified Littrow setup with the back extraction of light.     

2,5-Diphenyloxazole chromium(III) complexes

Summary Complexes of chromium(III) with 2,5-diphenyloxazole (PPO) of general formula Cr(PPO)_nX₃·m H₂O, where X=Cl^–, Br^–, I^– or NO ₃ ^su– ; n=1–3 and m=0–6, have been prepared and studied by spectroscopic and magnetic methods and by molar conductivity measurements. All the complexes seem to be hexacoordinated, generally with monodentate N-bonded ligand.     

Detection of DNA hybridization on chemically modified graphene platforms

The increasing demand for simple, low-cost, rapid, sensitive and label-free methods for the detection of DNA sequences and the presence of single nucleotide polymorphisms (SNPs) has become an important issue in biomedical research. In this work, we studied the performances of several chemically modified graphene nanomaterials as sensing platforms by using the electrochemical impedance spectroscopy technique for the detection. We employed a hairpin DNA as a highly selective probe for the detection of SNP correlated to Alzheimer's disease. We believe that our findings may present a foundation for further research and development in graphene-based impedimetric biosensing.     

A 2DE approach for high-throughput antigen separation applicable to mAb production

A constantly increasing number of mABs are required for the validation of a large proportion of proteomic and protein-protein interaction data. The development of new robotic platforms has greatly enhanced the throughput of monoclonal antibody production; however, the availability of highly purified proteins to use as antigens currently represents the major bottleneck of the process. In this article, we describe a new 2DE approach to purify hundreds of proteins from cellular extracts in a very cost-effective and time-efficient way. The accuracy of the new purification method is shown to be comparable to high-resolution analytical 2DE. The effectiveness and the throughput of the method to purify proteins suitable for the development of mAbs are then assessed. Using this methodology, we were able to separate 447 proteins starting from 50 mg of proteins extracted from HT29 cells. Fractions containing more than 30 μg of protein constantly induced immunization in mice. Using a high-throughput process for monoclonal antibody production, we obtained an average of 3.5 mAbs for each protein. According to pilot experiments, we can predict that starting from an unfractionated cellular extract it is possible to obtain approximately 200 proteins usable for monoclonal antibody development. Our results indicate that the number of antigens available for monoclonal antibody production can be further increased by running parallel separations. The proposed methodology will then facilitate the high-throughput monoclonal antibody process providing a vast array of high quality antigens at very low cost.