Sequential kinetic resolution catalyzed by halohydrin dehalogenase

A sequential kinetic resolution catalyzed by halohydrin dehalogenase was employed for the synthesis of two valuable enantiopure building blocks. Resolution of methyl 4-chloro-3-hydroxybutanoate methylester ((R,S)-2) with use of a Trp249Phe mutant of halohydrin dehalogenase yielded methyl 4-cyano-3-hydroxybutanoate methylester ((S)-4) with 96.8% ee (40% yield) and (S)-2 with 95.2% ee (41% yield). This reaction is carried out in aqueous solution under mild conditions and provides access to a useful statin side-chain building block.     

Polymorphism clones of homogeneous structures: generating sets,Sierpiński rank,cofinality and the Bergman property

In this paper, motivated by classical results by Sierpiński, Arnold and Kolmogorov, we derive sufficient conditions for polymorphism clones of homogeneous structures to have a generating set of bounded arity. We use our findings in order to describe a class of homogeneous structures whose polymorphism clones have a finite Sierpiński rank, uncountable cofinality, and the Bergman property.     

Study on the synthesis and molecular recognition of new receptors for selective complexation of carboxylic acids

A new synthetic method based on the synthesis of unsymmetrical thioureas followed by double S-alkylation reaction by xylylene dibromides was used to obtain isothiouronium receptors. Their binding abilities to acetate, succinate and maleate anions were evaluated by UV-vis spectroscopic titrations in such solvents as water, acetonitrile, methanol and mixtures of acetonitrile/methanol (1:1, v/v). For simple receptor 4 with one isothiouronium group, no selectivity was observed in the complexation of the anions studied. Receptors (R) 5a-c with two thiouronium groups are able to form with all the anions studied (A) not only stable complexes of 1:1 stoichiometry but also other possessing structure of the type A_nR_m. The most reliable values of stability constants are for systems of the type maleate anion-receptor 5 and acetate-receptor 5b. However, the best selectivity in the mixed solvents is demonstrated by anion-5c system. The study indicates also that particularly 5c is preferred as a chemosensor for the maleate anion. The obtained results suggest that subtle changes in the receptor structure lead to different binding modes towards anions.     

Determination of essential elements (Mn,Fe, Cu and Zn) in herbal teas by TXRF,FAAS and ICP-OES

The aim of this study was the comparison of the results obtained in the determination of the content of essential elements such as Mn, Fe, Cu and Zn in vegetation samples using different analytical approaches, including suspension preparation and total reflection X-ray fluorescence ( TXRF) analysis as well as most commonly used spectroscopic methods in the field of vegetal analysis such as acid digestion in combination with atomic emission (AES) and atomic absorption spectrometry (AAS). In the case of TXRF analysis, two instruments equipped with different X-ray tubes anodes (W and Mo) were used to better evaluate the potential of TXRF for vegetal samples analysis. Analytical figures of merit for the considered methods were determined by the analysis of plant reference materials. The one-way analysis of variance (ANOVA) applied to the analysed and certified values showed that the results were not statistically different at the significance level of p-values <0.05. Therefore, suspension preparation and TXRF analysis proved to be a sustainable and fast analytical alternative to the most commonly used ones involving a previous digestion of the sample and inductively coupled plasma optical emission spectrometry (ICP-OES) or flame atomic absorption spectrometry (FAAS) analysis. Finally, the different analytical approaches were applied to the determination of Mn, Fe, Cu and Zn in a set of herbal teas used for medical purposes.     

Quantitative MRI analysis of structural changes in tomato tissues resulting from dehydration

A quantitative magnetic resonance imaging (MRI) analysis at 1.5T of the effects of different dehydration regimes on transverse relaxation parameters measured in tomato tissue is presented. Multi-exponential T₂ maps have been estimated for the first time, providing access to spatialized microstructural information at voxel scale. The objective was to provide a better understanding of the changes in the multi-exponential transverse relaxation parameters induced by dehydration in tomato tissues and to unravel the effects of microstructure and composition on relaxation parameters. The results led to the hypothesis that the multi-exponential relaxation signal reflects cell compartmentation and tissue heterogeneity, even at the voxel scale. Multi-exponential relaxation times provided information about water loss from specific cell compartments and seem to indicate that the dehydration process mainly affects large cells. By contrast, total signal intensity showed no sensitivity to variations in water content in the range investigated in the present study (between 95% [fresh tissue] and 90% [after dehydration]). The variation in relaxation times resulting from water loss was due to both changes in solute concentration and compartment size. The comparative analysis of the two contrasted tissues in terms of microporosity demonstrated that magnetic susceptibility effects, caused by the presence of air in the placenta tissue, significantly impact the effective relaxation and might be the dominant effect in the variations observed in relaxation times in this tissue.     

Inhibitory Effect of DMSO on Halohydrin Dehalogenase: Experimental and Computational Insights into the Influence of an Organic Co-solvent on the Structural and Catalytic Properties of a Biocatalyst

Although the application of organic solvents in biocatalysis is well explored, in-depth understanding of the interactions of solvent with proteins, in particular oligomeric ones, is still scant. Understanding these interactions is essential in tailoring enzymes for industrially relevant catalysis in nonaqueous media. In our study, the homotetrameric enzyme halohydrin dehalogenase (HHDH) from Agrobacterium radiobacter AD1 (HheC) was investigated, as a model system, in DMSO/water solvent mixtures. DMSO, the most commonly used co-solvent for biocatalytic transformations, was found to act as a mixed-type inhibitor with a prevalent competitive contribution. Even 5 % (v/v) DMSO inhibits the activity of HheC by half. Molecular dynamics (MD) simulations showed that DMSO keeps close to Ser-Tyr catalytic residues forming alternate H-bonds with them. Stability measurements paired with differential scanning calorimetry, dynamic light scattering methods and MD studies revealed that HheC maintains its structural integrity with as much as 30 % (v/v) DMSO.