2D FT-ICR MS of Calmodulin: A Top-Down and Bottom-Up Approach

Two-dimensional Fourier transform ion cyclotron resonance mass spectrometry (2D FT-ICR MS) allows data-independent fragmentation of all ions in a sample and correlation of fragment ions to their precursors through the modulation of precursor ion cyclotron radii prior to fragmentation. Previous results show that implementation of 2D FT-ICR MS with infrared multi-photon dissociation (IRMPD) and electron capture dissociation (ECD) has turned this method into a useful analytical tool. In this work, IRMPD tandem mass spectrometry of calmodulin (CaM) has been performed both in one-dimensional and two-dimensional FT-ICR MS using a top-down and bottom-up approach. 2D IRMPD FT-ICR MS is used to achieve extensive inter-residue bond cleavage and assignment for CaM, using its unique features for fragment identification in a less time- and sample-consuming experiment than doing the same thing using sequential MS/MS experiments.

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Structural and spectroscopic characterization of copper(II) complexes of a new bisamide functionalized imidazole tripod and evidence for the formation of a mononuclear end-on Cu-OOH species

A new polyimidazole tripod N,N-bis((1-methyl-4-pivalamidoimidazol-2-yl)methyl)-N'-((1-methylimidazol-2-yl)methyl)amine (L2) has been synthesized and shown to form intramolecular hydrogen bonds with different axial ligands bonded to Cu(II) in the solid state. The same hydrogen-bonding property of L2 appears responsible for the stabilization of a Cu(II)-OOH species in solution. The crystal structures of L2 and three of its Cu(II) complexes are reported. The [Cu(L2)X]ClO4 complexes, 4-6 (X- = Cl-, OH-, or N3-) have distorted trigonal bipyramidal geometries in the solid state and have been characterized further by UV-vis absorption, electron paramagnetic resonance (EPR) spectroscopy, and cyclic voltammetry. The reaction of [Cu(L2)OH](ClO4) (5) with H2O2 and tert-butyl hydroperoxide in methanol generates [Cu(L2)OOH](ClO4) (7) and [Cu(L2)OO(t)Bu](ClO4) (8) which have been characterized by different spectroscopic methods. The compound [Cu(L2)OO(t)Bu]+ displays a band at 395 nm (epsilon = 950 M(-1) cm(-1)) assigned to an alkylperoxo pi*(sigma) --> Cu ligand-to-metal charge transfer (LMCT) transition, while [Cu(L2)OOH]+ displays a peroxo pi*(sigma) --> Cu charge-transfer transition at 365 nm with epsilon = 1300 M(-1) cm(-1), a mass ion at m/z 593.4, and nu(O-O) stretch (resonance Raman) at 854 cm(-1) that shifts to lower energy by 46 cm(-1) upon 18O substitution.     

High-spin to low-spin relaxation kinetics in the [Fe(TRIM)2]Cl2 complex

A quasi-quantitative photo-induced low-spin (LS)-->high-spin (HS) conversion of FeII ions has been observed in the [Fe(TRIM)2]Cl2 complex by irradiating the sample with blue light (488 nm) at 10 K. The time dependence of the HS-->LS relaxation has been studied between 10 K and 44 K by means of magnetic susceptibility measurements. These relaxation curves could be satisfactorily fitted by mono-exponential decays including tunnelling effect except for temperatures below 30 K. The introduction of a distribution of vibrational frequencies into this model improved significantly the fits in the low-temperature range and gave a good agreement with the experimental data in the whole temperature range suggesting a multi-rate relaxation process in this complex.     

Hydrogen electrosorption in nanocrystalline Ti-based alloys

The electrochemical behavior in alkaline solution (1 M NaOH) of nanocrystalline Ti:Ru:Fe:O (2:1:1:2) prepared by high-energy ball milling was studied over its whole electroactivity domain, with a particular emphasis on the hydrogen evolution reaction (her). Comparison has also been made with nanocrystalline Ti:Ru:Fe (2:1:1) and a mixture of Ti:TiO:Ru:Fe₂O₃ (3/2:1/2:1:1/2). It was shown by cyclic voltammetry, open circuit potential decay and chronopotentiometry measurements that hydrogen absorption in the electrode material occurs during hydrogen discharge. The electrochemical behavior of nanocrystalline Ti:Ru:Fe:O (2:1:1:2) closely follows that of Ti:Ru:Fe (2:1:1), but differs radically from that of Ti:TiO:Ru:Fe₂O₃ (3/2:1/2:1:1/2). This is due to the fact that the former two compounds contain a significant fraction of B2 phase (59 and 97 wt.%, respectively), while the latter does not. In steady state conditions, the ratio H/B2 phase in nanocrystalline Ti:Ru:Fe:O (2:1:1:2) is 0.15, about 1.6 times less than that for the O-free nanocrystalline compound. The coefficient of diffusion of hydrogen in nanocrystalline Ti:Ru:Fe:O (2:1:1:2) is 2.6×10⁻¹³ cm² s⁻¹, more than three times less than that in nanocrystalline Ti:Ru:Fe (2:1:1). The difference between the hydrogen absorption characteristics of both nanocrystalline compounds are tracked down to the fact that their B2 phases have different stoichiometries.     

The electrochemical preparation of soluble electrically conducting polymers of 3-methoxythiophene with narrow distributions of molecular weight

Solutions of 3-methoxythiophene (MeOT) in dimethylformamide (DMF) were electrolyzed at controlled electrode potentials. The polymerizations were studied under homogeneous conditions in solutions in which the polymer was soluble in the medium, and no coating of the electrodes occurred. The reaction proceeded at high coulombic efficiency and a first order dependence on monomer concentration was observed. The molecular weights of the polymers were determined by gel permeation chromatography. All samples showed a narrow distribution of molecular weights, with M_w/M_n ranging from 1.01 to 1.07. The molecular weight was low (about 3000 Daltons) and did not change in magnitude during the course of the reaction from 10 to 86% conversion, or with change in electrode potential from 1.55 to 1.65 V vs. SCE. The data are interpreted on a model based upon the competitive formation of chemically unreactive bipolarons.     

Near-field optical characterization of interacting and non-interacting gold nanoparticles embedded in a silica thin film

By near-field optics, we characterized the local optical properties of clusters of gold nanoparticles randomly distributed under a 50 nm-thick SiO₂ thin film. A local field enhancement is visible above isolated clusters. A few hundred nanometers away from them, we observed a polarization-dependent pattern with elliptical lobes oriented in the incident polarization direction. A simple simulation shows that the observed near-field images can be represented by the sum of the field of an oscillating dipole and the incident field. When the cluster density is larger, the measured near-field images show numerous bright and dark spots. The position of the bright spots does not necessarily coincide with the gold clusters showing the presence of coupling effects between them.     

On Morita Equivalence for Simple Generalized Weyl Algebras

We give a necessary condition for Morita equivalence of simple Generalized Weyl algebras of classical type. We propose a reformulation of Hodges’ result, which describes Morita equivalences in case the polynomial defining the Generalized Weyl algebra has degree 2, in terms of isomorphisms of quantum tori, inspired by similar considerations in noncommutative differential geometry. We study how far this link can be generalized for n ≥ 3.