Ab initio stochastic optimization of conformational and many-body degrees of freedom

Moderate to large size molecules in solution have complex energy surfaces due to intramolecular (conformational) and intermolecular (many-body) interactions. The first principles Monte Carlo (FPMC) method, previously shown to effectively locate minimum-energy structures for systems with only many-body complexity, has been extended to address conformational flexibility by adding three new Monte Carlo move types. The primary advantage of the FPMC method is the ability to efficiently locate minimum energy structures of molecules with conformational flexibility in the presence of explicit solvent molecules using highly accurate quantum chemical calculations. The additions to FPMC were validated by studying conformers of glycerol, glyceraldehyde, and a large humic acid monomer unit. The structure of glyceraldehyde in the presence of one and two water molecules was also explored to demonstrate the power of FPMC to study systems with both conformational and many-body degrees of freedom.     

Flow-through radioactivity detection of 3H- and 14C-labelled compounds in reversed-phase liquid chromatography by a liquid scintillation counting technique based on post-column extraction

A method for flow-through liquid scintillation counting in reversed-phase liquid chromatography (RP-LC) based on the continuous extraction of aqueous column eluates with a water-immiscible liquid scintillator is evaluated in terms of sensitivity, reproducibility and extra-column band broadening. ³H- and ¹⁴C-labelled phenylthiohydantoinamino acid derivatives of widely different polarity serve as model compounds. For extractable derivatives, counting efficiencies of over 30 and 80% can be obtained for ³H and ¹⁴C, respectively. The reproducibility and extra-column band broadening depend on the mixing ratio of scintillator and LC eluent; relative standard deviations (peak areas) of less than 3% can be obtained. The sensitivity of flow-through counting can be increased at least 150-fold by storing the segmented scintillator/eluate stream in a capillary storage loop. After the separation is complete, the stream is re-introduced into the radioactivity detector at reduced flow-rates to increase the mean residence time, i.e., the counting time, in the detector.     

Arzneimittel- und Drogenscreening aus Urin mittels DC unter besonderer Berücksichtigung von Reagentien mit geringer toxischer Belastung für Laborpersonal und Umwelt

Summary A technique is presented for the extraction of free and conjugated drugs and related compounds out of small quantities of urine. The method is designed in such a way that many samples can be tested for a great number of substances at the same time. Furthermore, we tried to achieve a high quality analysis using when ever possible chemicals with relatively low toxicity to men and environment. Therefore we avoided e.g., halogenated hydrocarbons. The detection of the substances is only performed by thin-layer chromatography (TLC) using well known reagents, like ninhydrin, Dragendorff, iodoplatinate and ferric chloride solutions. If necessary, the extracts can also be used with other Chromatographic techniques, particularly with GC/MS, if a substance has to be clearly identified. Approximately 500 authentical urines have been analyzed in a 1 year period using the method described. We found about 75 different substances. These results are presented in a table.     

Modeling the adsorption of U(VI) onto animal chitin using coupled mass transfer and surface complexation

This paper reports the development of a treatment system, using animal chitin as a passive biosorbent, for removing U(VI) from aqueous waste streams. An integral part of this system is a model that provides for the optimization of the treatment system through simulation of U(VI) removal efficiency based on the characteristics of the influent waste stream. The model accounts for changing solution matrix conditions through the coupling of surface complexation and mass transfer models. Complexation of U(VI) by chitin surface sites was modeled using FITEQL. Application of FITEQL in the “forward” mode provided the sorbed and aqueous phase concentrations needed for the mass transfer model. The mass transfer model was derived for both batch and continuously stirred tank reactor (CSTR) configurations using Fick's Law, reactor mass balances and rate law expressions. The coupled model was successfully validated using CSTR data at pH 6.5 and rate constants determined from batch sorption experiments. The CSTR configuration yields a steady-state, eighty percent U(VI) removal for 1 μM influent U(VI) with a solution-phase pH of 6.5 and 3.9 g l⁻¹ chitin.     

Synthesen von Heterocyclen, 61. Mitt.: Über Dicumarino- und Dicarbostyrilo-oxathiine

Zusammenfassung Durch Einwirkung von SOCl₂ auf 4-Hydroxycumarin bzw. 4-Hydroxycarbostyril sind Bis-(4-hydroxycumarinyl-[3])-sulfid (I) und Bis-(4-hydroxycarbostyril-[3])-sulfid (II) leicht zugänglich. Diese Sulfide können zu Dicumarino- bzw. Dicarbostyrilo-(1,4)-oxathiinen (III bzw. IV) cyclisiert werden.

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Bis-(4-hydroxycoumarinyl-[3])-sulfide (I) and bis-(4-hydroxycarbostyril-[3])-sulfide (II) have been prepared by the reaction between SOCl₂ and 4-hydroxycoumarin and 4-hydroxycarbostyril. Cyclisation of these sulfides yielded dicoumarino- (III) and dicarbostyrilo-oxathiin-(1.4) (IV).

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Herrn KollegenH. Bretschneider, Innsbruck, mit den besten Wünschen zum 60. Geburtstag.

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Aus der DissertationTh. Kappe, Universität Graz 1961, S. 78–83.     

B(E2)-values of even-a nuclei with 82 neutrons

Coulomb excitation of the first excited 2⁺-state was measured usingα-particles to determine reduced transition probabilities,B(E2; 0 _gs ⁺ →2 ₁ ⁺ ), in nuclei with a closed shell of 82 neutrons. TheB(E2; 0 _gs ⁺ →2 ₁ ⁺ -values are 10.2 single-particle units (spu) for¹³⁸Ba, 13.5 spu for¹⁴⁰Ce, 11.9 spu for¹⁴²Nd and 11.6 spu for¹⁴⁴Sm. The uncertainty ranges from 1.3 % to 2.3 %.     

Free‐volume variation in polyethylenes of different crystallinities: Positron lifetime,density, and X‐ray studies

High‐quality positron lifetime measurements (70 million total counts) are reported for polyethylenes (PEs) of different crystallinities (X_c = 3–82%). The specific volumes of the crystalline and amorphous phases (V_c and V_a, respectively) were estimated from density and wide‐angle X‐ray scattering (WAXS) experiments. Some samples (those with low values of X_c) were branched PEs, and those with high values of X_c were linear PEs for which X_c was varied with changes in the crystallization temperature. Both V_c and V_a increase with decreasing X_c in the range 0% ≤ X_c ≤ 56% (the branched PEs) but are constant for X_c ≥ 56% (the linear PEs). The lifetime spectra were analyzed with the MELT and LIFSPECFIT routines. Artifacts that can appear in the spectrum analysis were checked via an analysis of computer‐generated spectra. Four lifetime components appeared in all of the PEs; the two long‐lived ones are attributed to pick‐off annihilation of ortho‐positronium (o‐Ps) in crystalline regions (τ₃) and in holes of the amorphous phase (τ₄). With increasing X_c, τ₃ decreases from about 1.2 to 1 ns, τ₄ decreases from 3.0 to 2.5 ns, and the intensity I₄ decreases from 29 to 0%. An increase in I₃ from 6 to 12% was observed. A comparison with simulations shows that the true I₃ value approaches 0 for X_c → 0%. The decrease in I₄ is weaker than the increase in X_c; this leads to the conclusion that the apparent specific o‐Ps yield in the amorphous phase I₄^Xc increases with X_c. Possible reasons for this surprising results are discussed. The fractional free hole volume [h = (V_a ? V_occ)/V_a, where V_occ is the crystalline occupied volume] was estimated from density and WAXS results. Between X_c = 0 and 56%, h decreases from 0.151 to 0.090, but it does not change further above X_c = 56%. The mean size (v) of the local free volumes (holes) estimated from τ₄ decreases from 200 to 150 ų. The number density of holes (N_h) calculated from these values (N_h = h/v) also decreases from 0.8 to 0.6 nm^?3 in the range 0% ≤ X_c ≤ 56%. The values of V_a, V_c, h, and N_h increase with an increasing degree of branching but do not vary for linear PEs. The possible influence of a crystalline–amorphous interfacial phase (three‐phase model) on the observed lifetime parameters is also discussed. © 2001 John Wiley & Sons, Inc. J Polym Sci Part B: Polym Phys 40: 65–81, 2002     

A self-assembled multivalent pseudopolyrotaxane for binding galectin-1

A self-assembled pseudopolyrotaxane consisting of lactoside-displaying cyclodextrin (CD) "beads" threaded onto a linear polyviologen "string" was investigated for its ability to inhibit galectin-1-mediated T-cell agglutination. The CDs of the pseudopolyrotaxane are able to spin around the axis of the polymer chain as well as to move back and forth along its backbone to alter the presentation of its ligand. This supramolecular superstructure incorporates all the advantages of polymeric structures, such as the ability to span large distances, along with a distinctively dynamic presentation of its lactoside ligands to afford a neoglycoconjugate that can adjust to the relative stereochemistries of the lectin's binding sites. The pseudopolyrotaxane exhibited a valency-corrected 10-fold enhancement over native lactose in the agglutination assay, which was greater than the enhancements observed for lactoside-bearing trivalent glycoclusters and a lactoside-bearing chitosan polymer tested using the same assay. The experimental results indicate that supramolecular architectures, such as the pseudopolyrotaxane, provide tools for investigating protein-carbohydrate interactions.     

Coupling of narrow-bore liquid chromatography to thin-layer chromatography : Part I. Interfacing

The coupling of liquid chromatography (l.c.) on narrow-bore columns to thin-layer chromatography (t.l.c.) is described. The effluent from a l.c. column can be deposited on a t.l.c. plate after a normal-phase or reversed-phase separation without serious loss of chromatographic information. Both silica and alkyl-modified silica plates can be used for storage. The interface is a fused silica capillary which connects the column outlet to the spray jet assembly of a Linomat applicator for t.l.c. The stored chromatogram can serve as starting point for a new separation, but also allows the use of detection principles which are normally not compatible with l.c. The chromatography of some polynuclear aromatic hydrocarbons is used to illustrate the possibilities of the combinations.