Determination of species-specific components in the venom of Parabuthus scorpions from southern Africa using matrix-assisted laser desorption time-of-flight mass spectrometry

The aim of the present study was to analyze mass spectra of scorpions belonging to the genus Parabuthus (Pocock 1890) by means of matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOFMS) and to construct a species-specific venom code for species identification. The venom compositions of sixteen Parabuthus species, occurring in southern Africa, were characterized using representative peaks in the molecular mass range of 6400-8400 Da. This mass range is characteristic for the typical long-chain neurotoxins influencing sodium channels. Only a few of these peptides have been sequenced up to now. The impetus for development of these species-specific profiles was the observation of unique, highly reproducible mass spectral peaks within a specific species. An identification label for all the different species could be found using a minimum number of peaks. MALDI-TOFMS is therefore proposed as a complementary method to morphological and behavioural characteristics for species and ultimately subspecies discrimination.     

Speciation of nickel in surface waters measured with the Donnan membrane technique

The evaluation of the ecotoxicological risk of nickel (Ni) in surface water is hampered by a lack of speciation data. Six surface waters were sampled and speciation of Ni(II) was measured by the Donnan membrane technique (DMT) combined with radiochemical determination of ⁶³Ni. The free Ni²⁺ ion fraction in the dissolved (<0.45 μm) phase was determined at background Ni concentration ((4-8) × 10⁻⁸ M) and at concentrations in the range of toxicity thresholds for the Ni sensitive species Cerodaphnia dubia (5 × 10⁻⁸ to 2 × 10⁻⁶ M). The free ion fraction ranged from 4 to 45% at background Ni and increased with increasing Ni concentration and water hardness and with decreasing pH. The equilibration time after addition of Ni²⁺ (3 h-7 d) did not significantly change the measured free ion fraction. Predictions of the Humic-Ion Binding Model WHAM (Windermere Humic Aqueous Model) VI overestimated the observed free Ni²⁺ fraction (median > two-fold), even when assuming that all dissolved organic matter (DOM) was present as fulvic acid (FA). The impact of several model parameters affecting the prediction of Ni speciation were evaluated, including the solubility product of Fe(OH)₃, which affects the Fe competition for complexation by DOM. The best fit (R² = 0.88) was obtained by increasing only the distribution term ΔLK₂, which modifies the binding strength of multi-dentate sites, to accommodate the observed dependence of free ion fraction on Ni concentration.     

Photodissociation of vibrationally excited SH and SD radicals at 288 and 291 nm: the S(1D2) channel

Ultraviolet photodissociation of SH (X 2Pi, upsilon"=2-7) and SD (X 2Pi, upsilon"=3-7) has been studied at 288 and 291 nm, using the velocity map imaging technique to probe the angular and speed distributions of the S(1D2) products. Photodissociation cross sections for the A 2Sigma+<--X 2Pi(upsilon") and 2Delta<--X 2Pi(upsilon") transitions have been obtained by ab initio calculations at the CASSCF-MRSDCI/aug-cc-pV5Z level of theory. Both the experimental and theoretical results show that SH/SD photodissociation from X 2Pi (upsilon"相似文献   

Application of an omonasteine ligation strategy for the total chemical synthesis of the BRD7 bromodomain

The use of omonasteine (Omo) in sequential peptide ligation strategies extends the scope of homocysteine (Hcy) ligation to longer, methionine-rich proteins. Hcy-to-Omo conversion can be performed on-resin, while the Omo-to-Hcy deprotection can be performed in situ after peptide ligation. This strategy was successfully applied in the synthesis of the BRD7 bromodomain.     

Cold and ultracold NH-NH collisions: the field-free case

We present elastic and inelastic spin-changing cross sections for cold and ultracold NH(X (3)Σ(-)) + NH(X (3)Σ(-)) collisions, obtained from full quantum scattering calculations on an accurate ab initio quintet potential-energy surface. Although we consider only collisions in zero field, we focus on the cross sections relevant for magnetic trapping experiments. It is shown that evaporative cooling of both fermionic (14)NH and bosonic (15)NH is likely to be successful for hyperfine states that allow s-wave collisions. The calculated cross sections are very sensitive to the details of the interaction potential, due to the presence of (quasi)bound state resonances. The remaining inaccuracy of the ab initio potential-energy surface therefore gives rise to an uncertainty in the numerical cross-section values. However, based on a sampling of the uncertainty range of the ab initio calculations, we conclude that the exact potential is likely to be such that the elastic-to-inelastic cross-section ratio is sufficiently large to achieve efficient evaporative cooling. This likelihood is only weakly dependent on the size of the channel basis set used in the scattering calculations.     

Setting-up early computer programs: D. H. Lehmer’s ENIAC computation

A complete reconstruction of Lehmer’s ENIAC set-up for computing the exponents of p modulo two is given. This program served as an early test program for the ENIAC (1946). The reconstruction illustrates the difficulties of early programmers to find a way between a man operated and a machine operated computation. These difficulties concern both the content level (the algorithm) and the formal level (the logic of sequencing operations).     

Validation of a newly developed FTIR in situ reactor: Real time study of photocatalytic degradation of nitric oxide

For many years, photocatalysis has been proposed as one of the promising techniques to abate environmental pollutants. To improve these reactions it is vital to know the reaction mechanisms of the photocatalytic degradation. This new reactor will make it possible to study the catalytic surface at the moment the reactions occur. By the means of UV LED illumination there is no need of an external UV lamp and thus lowers the cost. The validation of this newly developed reactor is done by investigating the photocatalytic reaction mechanism of nitric oxide (NO) and comparing these findings with those already discussed in literature. From these results, it became clear that the newly developed FTIR in situ reactor allows real time study of photocatalytic degradations.     

Ultrasound-responsive polymer-coated microbubbles that bind and protect DNA

Ultrasound in combination with microbubbles has recently been considered by gene delivery scientists to be an interesting approach to enhance gene transfer into cells. Its low toxicity and simplicity to apply in vivo without major complications make this technology (sonoporation) especially attractive. Sonoporation of DNA has been evaluated in vivo by the injection of free plasmid DNA (pDNA) together with microbubbles (as used in diagnostic imaging) in the bloodstream. However, the in vivo gene-transfer efficiency in these experiments remained rather low. Both the enzymatic degradation of the injected pDNA as well as the low pDNA concentration in the neighborhood of sonoporated cell membranes may explain this low efficiency. Therefore, we developed polymer-coated microbubbles that can bind and protect the pDNA. Coating albumin-shelled microbubbles with poly(allylamine hydrochloride) (PAH) makes the surface charge of the microbubbles positive without drastically affecting the size distribution of the microbubbles, thereby not affecting the ultrasound responsiveness and injectability. The cationic coating allowed both to bind up to 0.1 pg of DNA per microbubble as well as to protect the bound DNA against nucleases. Finally, the PAH coating significantly increased the lifetime of the microbubbles (half-life approximately 7 h), making them more convenient for in vivo applications because more microbubbles are expected to reach the target organ. Binding and nuclease protection of DNA by polymer-coated diagnostic microbubbles has, to our knowledge, never been demonstrated. We conclude that these LbL-coated microbubbles might be significant in the further development of ultrasound-mediated gene delivery.