Synthesis and antimalarial effects of 2-(3,4-dichloroanilino)-7-[[[(dialkylamino)alkyl]amino]]-5-methyl-s-triazolo[1,5-a]pyrimidines

3,4-Dichlorophenylisothioeyanate ( 10 ) was allowed to react with 2-methy1-2-thiopseudourea to give methyl 4-(3,4-dichlorophenyl)(dithioaltophanimidate ( 11 ) (41%), which upon treatment with hydrazine afforded 3-amino-5-(3,4-dichloroanilino)-s-triazole ( 12 ) (54-91%). Ring-closure with ethyl acetoacetale in acetic acid afforded 2-(3,4-dichloroanilino)-5-methyl-s-triazolo[ 1,5-α ]-pyrimidin-7-ol ( 13 ) (81%). Chlorination with phosphorus oxychloride gave 7-chloro-2-(3,4-dichloroanilino)-5-methyl-s-triazolo[1,5-α ]pyrimidine ( 14 ) (98%), which was condensed with various amines to yield the desired 2-(3,4-diehloroanilino)-7-¶[(dialkylamino)alkyl]arnino¶-5-methyl-s-triazolo[ 1,5-α]pyrimidines ( 6 a-d). The structures of the s-triazolo[ 1,5-α ]pyrimidines were based on nmr spectroscopy and ring stability considerations. Several of the amino-s-triazolo[ 1,5-α ]pyrimidines possessed antimalarial activity against P. berghei in mice.     

Conformation of Tax-response elements in the human T-cell leukemia virus type I promoter

Background: HTLV I Tax is believed to activate viral gene expression by binding bZIP proteins (such as CRIB) and increasing their affinities for proviral THE target sites. Each 21 by THE target site contains an imperfect copy of the intrinsically bent CRE target site (the TRE core) surrounded by highly conserved flanking sequences. These flanking sequences are essential for maximal increases in DNA affinity and transactivation, but they are not, apparently, contacted by protein. Here we employ non-denaturing gel electrophoresis to evaluate TRE conformation in the presence and absence of bZIP proteins, and to explore the role of DNA conformation in viral transactivation.Results: Our results show that the TRE-1 flanking sequences modulate the structure and modestly increase the affinity of a CREB bZIP peptide for the TRE-1 core recognition sequence. These flanking sequences are also essential for a maximal increase in stability of the CREB-DNA complex in the presence of Tax.Conclusions: The CRE-like TRE core and the TRE flanking sequences are both essential for formation of stable CRIB-TRE-1 and Tax-CREB-TRE-1 complexes. These two DNA segments may have co-evolved into a unique structure capable of recognizing Tax and a bZIP protein.     

Folate antagonists. 6. Synthesis and antimalarial effects of fused 2,4-diaminothieno[2,3-d]pyrimidines

2,4-Diamino-5,7-dihydro-6H-thiopyrano[4′,3′:4,5]thieno[2,3-d]pyrirnidine, 2,4-diamino-9H-mdeno[1′,2′:4,5]thieno[2,3-d]pyrimidine, 2,4-diamino-5H-indeno[2′,1′:4,5]thieno[2,3-d]pyrimidine, 9,11-diamino-5,6-dihydronaphtho[1′,2′:4,5]thieno[2,3-d]pyrimidine, 7,9-diamino-5,6-dihydronaphtho[2′,1′:4,5]thieno[2,3-d]pyrimidine, 2,4-diamino-7-benzy]-5,6,7,8-tetrahydropyrido[4′,3′:4,5]thieno[2,3-d]pyrimidine, and various 2,4-diamino-5,6,7,8-tetrahydro-[1]benzothieno[2,3-d]pyrimidines were synthesized by cyclization of the requisite fused 2-aminothio-phenene-3-carbonitriles utilizing chloroformamidine hydrochloride in diglyme. Several compounds exhibited strong inhibitory effects against Streptococcus faecalis (MGH-2), Staphylococcus aureus (UC-76), Streptococcus faecium (ATCC 8043), Lactobacillus casei (ATCC 7469), and Pediococcus cerevisiae (ATCC 8081) in vitro, and three compounds displayed antimalarial activity against Plasmodium berghei in mice and P. falciparum (Uganda I) in vitro.     

Molecular Mechanisms Of Sweet Taste 2: Glucopyranose,Fructopyranose And Sucrose

Abstract

Interactions of glucopyranose, fructopyranose and sucrose with a proteinaceous receptor model have been examined to validate the stereomolecular mechanisms of sweet taste proposed for sugars. The methylene groups at C-6 of glucose, at C-1 and C-6 of fructose and at C-6, C-1' and C-6' of sucrose appear to play an important role as dispersive interaction centres with the receptor.     

Kinetic theory of granular shear flow: Constitutive relations for the hard-disk model

A kinetic theory for the constitutive Theological relations of rapid granular shear flow of hard circular disks, characterized by a coefficient of restitutione and a surface roughness coefficient, is formulated. From a set of general constitutive equations for single-particle dynamical variables, the approximate expressions for the limit of small and large dimensionless dissipative parameterR _t are obtained. HereR _t is defined as the ratio /, where is the fluctuation of translational velocity from the mean flow velocity, is the diameter of a disk, and is the shear rate. At smallR _t the theoretical predictions can be compared with exact computer simulation results of granular dynamics that are also reported. The agreement between theory and simulation is better than expected; the present theory is accurate up to high packing density in this region ofR _t .     

Positional targets for lingual consonants defined using electromagnetic articulography

The study examined the positional targets for lingual consonants defined using a point-parameterized approach with Wave (NDI, Waterloo, ON, Canada). The overall goal was to determine which consonants had unique tongue positions with respect to other consonants. Nineteen talkers repeated vowel-consonant-vowel (VCV) syllables that included consonants /t, d, s, z, , k, g/ in symmetrical vowel contexts /i, u, a/, embedded in a carrier phrase. Target regions for each consonant, characterized in terms of x,y,z tongue positions at the point of maximum tongue elevation, were extracted. Distances and overlaps were computed between all consonant pairs and compared to the distances and overlaps of their contextual targets. Cognates and postalveolar homorganics were found to share the location of their target regions. On average, alveolar stops showed distinctively different target regions than alveolar fricatives, which in turn showed different target region locations than the postalveolar consonants. Across talker variability in target locations was partially explained by differences in habitual speaking rate and hard palate characteristics.     

Geometric Convergence Rates for Time-Sampled Markov Chains

We consider time-sampled Markov chain kernels, of the form P = _n n P ⁿ . We prove bounds on the total variation distance to stationarity of such chains. We are motivated by the analysis of near-periodic MCMC algorithms.