Shining Light on the Secreted Luciferases of Marine Copepods: Current Knowledge and Applications

Copepod luciferases—a family of small secretory proteins of 18.4–24.3 kDa, including a signal peptide—are responsible for bright secreted bioluminescence of some marine copepods. The copepod luciferases use coelenterazine as a substrate to produce blue light in a simple oxidation reaction without any additional cofactors. They do not share sequence or structural similarity with other identified bioluminescent proteins including coelenterazine‐dependent Renilla and Oplophorus luciferases. The small size, strong luminescence activity and high stability, including thermostability, make secreted copepod luciferases very attractive candidates as reporter proteins which are particularly useful for nondisruptive reporter assays and for high‐throughput format. The most known and extensively investigated representatives of this family are the first cloned GpLuc and MLuc luciferases from copepods Gaussia princeps and Metridia longa, respectively. Immediately after cloning, these homologous luciferases were successfully applied as bioluminescent reporters in vivo and in vitro, and since then, the scope of their applications continues to grow. This review is an attempt to systemize and critically evaluate the data scattered through numerous articles regarding the main structural features of copepod luciferases, their luminescent and physicochemical properties. We also review the main trends of their application as bioluminescent reporters in cell and molecular biology.     

Vapour permeation and sorption in fluoropolymer gel membrane based on ionic liquid 1-ethyl-3-methylimidazolium bis(trifluoromethylsulphonyl)imide

The emissions of hydrocarbons from fossil fuels into atmosphere entail both an economic loss and an environmental pollution. Membrane separations can be used for vapour recovery and/or vapour removal from the permanent gas stream, given that the appropriate membrane is identified. A neat poly(vinylidene fluoride-co-hexafluoropropylene) membrane is impermeable to both the representatives of aliphatic hydrocarbons and branched hydrocarbons, namely hexane and isooctane, whereas the permeation flux is enhanced by the presence of 80 mass % of the ionic liquid 1-ethyl-3-methylimidazolium bis(trifluoromethylsulphonyl)imide in the membrane, as detailed in this work. The permeabilities of hydrocarbon vapours were determined from the binary mixture containing hydrocarbon and nitrogen to simulate the real input of an air stream containing a condensable hydrocarbon. The diffusion coefficient determined from sorption measurements was higher for hexane, as would be expected for a smaller molecule, whereas both the sorption isotherms and permeabilities of the hydrocarbons studied were found to be almost identical. It is possible that the sorption effect predominates in the transport mechanism for VOCs/N₂ separations.     

Cyanine-Flavonol Hybrids for Near-Infrared Light-Activated Delivery of Carbon Monoxide

Carbon monoxide (CO) is an endogenous signaling molecule that controls a number of physiological processes. To circumvent the inherent toxicity of CO, light-activated CO-releasing molecules (photoCORMs) have emerged as an alternative for its administration. However, their wider application requires photoactivation using biologically benign visible and near-infrared (NIR) light. In this work, a strategy to access such photoCORMs by fusing two CO-releasing flavonol moieties with a NIR-absorbing cyanine dye is presented. These hybrids liberate two molecules of CO in high chemical yields upon activation with NIR light up to 820 nm and exhibit excellent uncaging cross-sections, which surpass the state-of-the-art by two orders of magnitude. Furthermore, the biocompatibility and applicability of the system in vitro and in vivo are demonstrated, and a mechanism of CO release is proposed. It is hoped that this strategy will stimulate the discovery of new classes of photoCORMs and accelerate the translation of CO-based phototherapy into practice.     

Simultaneous Determination of 11 Elements in Fly Ash by Inductively Coupled Plasma Orthogonal Acceleration Time-of-Flight Mass Spectrometry After Closed-Vessel Microwave-Assisted Extraction with Ammonium Fluoride

A method for simultaneous multi-element analysis of fly ash samples by inductively coupled plasma orthogonal acceleration time-of-flight mass spectrometry (oaTOF-ICP-MS) after closed-vessel microwave extraction with ammonium fluoride was introduced here. Corrosive and/or toxic acids like HF, HCl or HClO₄, as well as HNO₃, which are commonly used during sample preparation of the fly ash samples, are avoided in this method. The spectral effects due to the formation of different Cl, Na, K, Ca, Mg-containing polyatomic species interfering with the determination of a number of elements like As, Se or Ni during the oaTOF-ICP-MS analysis are negligible. Under the optimum experimental extraction conditions evaluated using a fractional factorial design (10 mg of the sample extracted with 5 mL of 140 g/L NH₄F for 10 min at 200°C), analysis of the resulting supernatant with Rh as an internal standard enabled precise and accurate simultaneous determination of 11 elements (Li, Be, Ni, As, Se, Rb, Sb, Cs, W, Tl and U) at trace and ultratrace levels. The accuracy was assessed by analysing two certified reference materials, namely Fine Fly Ash CTA-FFA-1 and Constituent Elements in Coal Fly Ash Standard Reference Material® 1633b. The precision of the reported method was better than 10%.     

Chemistry of 1,5-diketones: II. Specificity of transformations of polycyclic 1,5-diketones in acid media

2-(1,3-Diaryl-3-oxopropyl)cyclohexan-1-ones underwent carbo-and heterocyclization in a mixture of acetic acid with acetic anhydride in the presence of perchloric acid. The transformation of 2-(1,3-diaryl-3-oxopropyl)cyclohexan-1-ones into 2,4-diaryl-5,6,7,8-tetrahydrochromenylium salts was shown to involve intermediate 2,4-diarylbicyclo[3.3.1]non-2-en-9-ones. The structure of 2,4-diaryl-substituted bicyclo[3.3.1]non-2-en-9-ones and products of their reactions with halogens and hydroxylamine hydrochloride was confirmed by ¹H and ¹³C NMR spectroscopy.     

Interference-free determination of thallium in aqua regia leaches from rocks, soils and sediments by D(2)-ETAAS method using mixed palladium-citric acid-lithium chemical modifier

The mixture of palladium (chloride) with citric acid and lithium is proposed as a new chemical modifier for the elimination of interference occurred during the determination of Tl in aqua regia extracts from rocks, soils and sediments by electrothermal atomic absorption spectrometry using instrumentation with deuterium-lamp background correction (D₂-ETAAS). Palladium was preferred to rhodium and platinum as to analyte stabilization, citric acid served as an effective reducing agent facilitating formation of Pd-Tl stable covalent bonds playing an important role in the analyte stabilization. Citric acid in addition helps to remove most of interfering chloride at low temperature. The further addition of Li increased significantly the robustness of chemical modifier against strongly interfering ZnCl₂ matrix by binding free chlorine into a more stable LiCl molecule. In the presence of the proposed chemical modifier the temperature for the final step of pyrolysis was adjustable up to 1000 °C, without any noticeable loss of volatile Tl species and the interference of the rest chloride matrix was significantly reduced. The application of the modifier to direct determination of Tl in aqua regia extracts from rocks, soils and sediments has ensured the characteristic mass and LOD value for the original sample 13 pg and 0.043 μg g⁻¹, respectively (10-μL aliquots of sample) and has enabled the use of matrix-free standard solutions for attaining accurate analysis. The accuracy was verified by the analysis of certified reference samples and by the comparison of results with those found by an inductively coupled plasma orthogonal acceleration time-of-flight mass spectrometer (ICP-oa-TOFMS) method.     

Sensitivity enhancement of capillary electrophoresis-frontal analysis-based method for characterization of drug-protein interactions using on-line sample preconcentration

Capillary electrophoresis-frontal analysis is one of the most frequently used approaches for the study of plasma protein-drug interactions as a substantial part of new drug development. However, the capillary electrophoresis-frontal analysis typically combined with ultraviolet-visible detection suffers from insufficient concentration sensitivity, particularly for substances with limited solubility and low molar absorption coefficient. The sensitivity problem has been solved in this work by its combination with an on-line sample preconcentration. According to the knowledge of the authors this combination has never been used to characterize plasma protein-drug binding. It resulted in a fully automated and versatile methodology for the characterization of binding interactions. Further, the validated method minimalizes the experimental errors due to a reduction in the manipulation of samples. Moreover, employing an on-line preconcentration strategy with capillary electrophoresis-frontal analysis using human serum albumin-salicylic acid as a model system improves the drug concentration sensitivity 17-fold compared to the conventional method. The value of binding constant (1.51 ± 0.63) · 10⁴ L/mol obtained by this new capillary electrophoresis-frontal analysis modification is in agreement with the value (1.13 ± 0.28) ·10⁴ L/mol estimated by a conventional variant of capillary electrophoresis-frontal analysis without the preconcentration step, as well as with literature data obtained using different techniques.     

Impact of silica environment on hyperfine interactions in 𝜖-Fe2O3 nanoparticles

Magnetic nanoparticles have found broad applications in medicine, especially for cell targeting and transport, and as contrast agents in MRI. Our samples of ??-Fe₂O₃ nanoparticles were prepared by annealing in silica matrix, which was leached off and the bare particles were then coated with amorphous silica layers of various thicknesses. The distribution of particle sizes was determined from the TEM pictures giving the average size ～20 nm and the thickness of silica coating ～5; 8; 12; 19 nm. The particles were further characterized by the XRPD and DC magnetic measurements. The nanoparticles consisted mainly of ??-Fe₂O₃ with admixtures of ～1 % of the α phase and less than 1 % of the γ phase. The hysteresis loops displayed coercivities of ～2 T at room temperature. The parameters of hyperfine interactions were derived from transmission Mössbauer spectra. Observed differences of hyperfine fields for nanoparticles in the matrix and the bare ones are ascribed to strains produced during cooling of the composite. This interpretation is supported by slight changes of their lattice parameters and increase of the elementary cell volume deduced from XRD. The temperature dependence of the magnetization indicated a two-step magnetic transition of the ??-Fe₂O₃ nanoparticles spread between ～85 K and ～150 K, which is slightly modified by remanent tensile stresses in the case of nanoparticles in the matrix. The subsequent coating of the bare particles by silica produced no further change in hyperfine parameters, which indicates that this procedure does not modify magnetic properties of nanoparticles.     

Development of ICP-MS and ICP-OES methods for determination of gadolinium in samples related to hospital waste water treatment

A suitable analytical method making possible the determination of Gd and other rare-earth elements in samples related to hospital waste water treatment was sought with regard to various aspects of the experiment aimed at monitoring the fate of Gd-based contrast agents in the aquatic environment. The discrepancies and pitfalls of the proposed methodology were considered, resulting in a functional experimental plan. The inductively coupled plasma mass spectrometry (ICP-MS) method was used for the determination of Gd and other rare earth elements in river and hospital waste water and algae Parachlorella kessleri cultured in laboratory experiments. The sample preparation of algae prior to analysis was optimised. The ICP-MS method was validated using a recovery study, sample blanks, reference materials, and comparison with the inductively coupled plasma optical emission spectrometry (ICP-OES) method. The ICP-MS method was confirmed as suitable for monitoring the biosorption/bioaccumulation of Gd in algae and for evaluating the Gd anomaly in hospital waste water and rivers of Eastern Bohemia. In the laboratory experiments, the bioconcentration factors were calculated (all in L kg^?1) for algae cultured in inorganic Gd salt (about 1100), in waste water from a magnetic resonance workplace (2300) and in waste water from a hospital waste water treatment plant (4400). A positive Gd anomaly in waters from the river Elbe in the Eastern Bohemia region was found less pronounced in the areas unaffected than in the areas affected by waste waters from hospital.