An unexpected methyl group migration during on-column Stille derivatization of RNA

Postsynthetic Stille cross-coupling for functionalization of oligonucleotides on solid support was applied on iodo modified RNA utilizing different protecting group strategies. As result, the otherwise very successful ACE [bis(acetoxyethyloxy)-methyl orthoester] chemistry was found to be limited since methylated side-products formed as was investigated via enzymatic degradation of RNA and various monomer model reactions. Enzymatic digestion of poly uridine sequences revealed presence of considerable amounts of N³-methylated uridine derivatives due to migration of methyl as phosphate protecting group used in ACE strategy. Monomer test reactions mimicking conditions on RNA clearly indicated an enhanced methylation effect correlated to the Stille coupling procedure.     

A versatile synthetic strategy for nanoporous gold–organic hybrid materials for electrochemistry and photocatalysis

Nanoporous gold (npAu) was employed as high surface area substrate for immobilization of redox- and photooxidative-active organic molecules. A two-step synthetic routine is demonstrated as a versatile and robust method for immobilization of various molecules. First, self-assembled monolayers (SAMs) of thiols containing an azide moiety were prepared on npAu substrates. Then, alkyne-modified ferrocene, tetrathiafulvalene, and zinc(II)phthalocyanine derivatives were covalently bound via the click reaction to this linker. Following the provided synthetic procedures high performance composite materials are generated for electrochemistry and photochemistry. The robust bonding between the organic functional group and the gold support provides stability even under strongly oxidizing conditions (applied potential or singlet oxygen).     

Structure control in PMMA/silica hybrid nanoparticles by surface functionalization

Hydrophilic silica particles need to be hydrophobized to be encapsulated in a polymeric environment, which can be achieved by different methods. We report on the relationship between different hydrophobization techniques of silica and the final structure of poly(methyl methacrylate)/silica hybrid nanoparticles obtained by miniemulsion polymerization. Hydrophobization by cetyltrimethylammonium chloride (CTMA-Cl) uses the ionic interaction between the positively charged ammonium salt and the negatively charged silica surface, as shown by isothermal titration calorimetry. In this case, the interaction between polymer and silica surface needs to be enhanced, so 4-vinylpyridine (4-VP) was used as a co-monomer. Alternatively, the condensation reactions of 3-methacryloxypropyltrimethoxysilane (MPS) and octadecyltrimethoxysilane (ODTMS) were used to provide a covalent bond to the silica surface. The condensation reaction of the trimethoxysilane groups onto the silica surface was proven by Fourier transform infrared spectroscopy and thermogravimetric analysis. Hybrid nanoparticles were successfully formed with silica particles functionalized with the different functionalization agents. However, the structure of the resulting hybrid particles (i.e., the distribution of the silica particles within the polymer matrix) depends on the agent. The MPS-functionalized silica particles copolymerize with poly(methyl methacrylate), leading to a fixation of the silica particles inside the polymer and to a homogeneous distribution. The CTMA-Cl- and ODTMS-functionalized silica particles cannot copolymerize, but aggregate at the interface, leading to a Janus-like structure.     

From Chaos to Global Convergence

The main purpose of this paper is to investigate dynamical systems F : \mathbbR² ? \mathbbR²{F : \mathbb{R}^2 \rightarrow \mathbb{R}^2} of the form F(x, y) = (f(x, y), x). We assume that f : \mathbbR² ? \mathbbR{f : \mathbb{R}^2 \rightarrow \mathbb{R}} is continuous and satisfies a condition that holds when f is non decreasing with respect to the second variable. We show that for every initial condition x₀ = (x ₀, y ₀), such that the orbit

Automated determination of cadmium and lead in whole blood by computerized flow potentiometric stripping with carbon fibre electrodes

A sample pretreatment involving only the dilution (1 + 19) of two 0.2–0.4 ml sample aliquots with 0.5 M hydrochloric acid, with a standard addition to one of the aliquots, precedes the injection of each sample. The computer-controlled flow system used automatically executes a pre-programmed number of cycles on each sample pair before presenting the final result. Each cycle, which has a duration of 80 or 135 s for lead(II) and cadmium(II), respectively, involves the display of the derivative stripping signal on a printer/plotter and integration of the stripping peaks generated. For lead(II), striping is done in 0.5 M hydrochloric acid, which eliminates interferences from copper, though at the cost of a relatively high stripping rate, compared to the 5 M calcium chloride used for cadmium(II). The flow cell consists of a silver chloride-lined silver tube which acts as both reference and counter electrode, and a disposable carbon-fibre working electrode mounted in a PVC tube, which normally will operate for 50–200 cycles. The method was verified for whole blood reference standards and by comparison with results obtained by atomic absorption spectrometry.     

Enantioselective High-Throughput Assay Showcased for the Identification of (R)- as well as (S)-Selective Unspecific Peroxygenases for C−H Oxidation

Identifying (bio)catalysts displaying high enantio-/stereoselectivity is a fundamental prerequisite for the advancement of asymmetric catalysis. Herein, a high-throughput, stereoselective screening assay is reported that gives information on enantioselectivity, stereopreference and activity as showcased for peroxygenase-catalyzed hydroxylation. The assay is based on spectrophotometric analysis of the simultaneous formation of NAD(P)H from the alcohol dehydrogenase catalyzed enantioselective oxidation of the sec-alcohol product formed in the peroxygenase reaction. The assay was applied to investigate a library comprising 44 unspecific peroxygenases (UPOs) containing 25 UPOs not reported yet. Thereby, previously non-described wild-type UPOs displaying (S)- as well as (R)-stereoselectivity for the hydroxylation of representative model substrates were identified, reaching up to 98 % ee for the (R)- and 94 % ee for the (S)-enantiomer. Homology models with concomitant docking studies indicated the structural reason for the observed complementary stereopreference.     

Urethanases for the Enzymatic Hydrolysis of Low Molecular Weight Carbamates and the Recycling of Polyurethanes

Enzymatic degradation and recycling can reduce the environmental impact of plastics. Despite decades of research, no enzymes for the efficient hydrolysis of polyurethanes have been reported. Whereas the hydrolysis of the ester bonds in polyester-polyurethanes by cutinases is known, the urethane bonds in polyether-polyurethanes have remained inaccessible to biocatalytic hydrolysis. Here we report the discovery of urethanases from a metagenome library constructed from soil that had been exposed to polyurethane waste for many years. We then demonstrate the use of a urethanase in a chemoenzymatic process for polyurethane foam recycling. The urethanase hydrolyses low molecular weight dicarbamates resulting from chemical glycolysis of polyether-polyurethane foam, making this strategy broadly applicable to diverse polyether-polyurethane wastes.     

Design and synthesis of new 2-substituted-5-[2-(2-halobenzyloxy)phenyl]-1,3,4-oxadiazoles as anticonvulsant agents

A new series of 2-substituted-5-[2-(2-halobenzyloxy)phenyl]-1,3,4-oxadiazoles was designed and synthesized as anticonvulsant agents. Electroshock and pentylenetetrazole-induced lethal convulsion tests showed that the introduction of an amino group at position 2 of 1,3,4-oxadiazole ring and a fluoro substituent at ortho position of benzyloxy moiety had the best anticonvulsant activity. Our results showed that this effect is mediated through benzodiazepine receptors mechanism.     

High-Performance Liquid Chromatographic Determination of Cefepime and Cefazolin in Human Plasma and Dialysate

A simple high-performance liquid chromatographic (HPLC) method was developed for the simultaneous determination of cefepime and cefazolin in human plasma and dialysate. For component separation, the method utilized a C₁₈ column with an aqueous mobile phase of dibasic potassium hydrogen phosphate (pH 7.0) and methanol gradient at a flow rate of 1 mL min⁻¹. The method demonstrated linearity from 2.0 to 100.0 μg mL⁻¹ (r > 0.999) with detection limit of 1 μg mL⁻¹ for both cefepime and cefazolin. The method was utilized for evaluation of plasma and dialysate samples in a clinical study evaluating the dialyzer clearance of cefepime and cefazolin using high-flux hemodialysis with varying blood flow rates in chronic kidney failure patients undergoing hemodialysis and peritoneal dialysis treatment.     

Investigation on the self-association of an inorganic coordination compound with biological activity (Casiopeína III-ia) in aqueous solution

From studies using different experimental techniques employed to determine the presence of aggregates e.g. isothermal titration calorimetry, surface tension, electrical conductivity, UV–Vis spectrophotometry, dynamic and static light scattering, it is clearly demonstrated that the compound [Cu(4, 4′-dimethyl-2, 2′-bipyridine)(acetylacetonato)H₂O]NO₃ (Casiopeína III-ia), promising member of a family of new generation compounds for cancer treatment, is able to auto associate in aqueous media. Physicochemical properties associated with the formation of the aggregates were determined in pure water and in phosphate buffer media in order to simulate physiological conditions. From isothermal titration calorimetry and electrical conductivity measurements we calculated the dissociation constant of the aggregates, K _D . For pure water the values obtained in both techniques are 2.73 × 10^?4 and 5.93 × 10^?4 M respectively while for the buffer media we obtained 4.61 × 10^?4 and 1.57 × 10^?3 M. The enthalpy of dissociation, ?H _D , calculated from the calorimetric data shows that the presence of the phosphate ions has an energetic effect on the aggregate stability since in pure water a value of 18.79 kJ mol^?1 was obtained in comparison with the buffer media where a value 4 times bigger was found (70.48 kJ mol^?1). With the data collected from these techniques the number of monomers calculated which participate in the formation of the aggregates is around two. From our surface tension, electrical conductivity and UV–Vis spectrophotometry measurements the critical aggregate concentration, cac, was determined. For each technique specific concentration ranges were obtained but we can summarize that the cac in pure water is between 3 and 3.5 mM and for the buffer media is between 3.5 and 4 mM. Dynamic light scattering measurements provide us with the hydrodynamic diameter of the aggregates and from static light scattering measurements we determined the molecular weight of the Casiopeína III-ia aggregates to be of 1000.015 g mol^?1 which is two times the molecular weight of the Casiopeína III-ia molecule. This value is in agreement with the number of monomers which participate in the formation of the aggregates obtained from isothermal titration calorimetry and electrical conductivity data analysis.