Fractal aspects of calcium binding protein structures

The structures of EF-hand calcium binding proteins may be classified into two distinct groups: extended and compact structures. In this paper we studied 20 different structures of calcium binding proteins using the fractal analysis. Nine structures show extended shapes, one is semi-compact and the other 10 have compact shapes. Our study reveals different fractal characteristics for protein backbones belonging to different structural classes and these observations may be correlated to the physicochemical forces governing the protein folding.     

Magnetic properties of poly(propylene imine)-copper dendromesogenic complexes: An EPR study.

Copper(II) complexes formed by coordination of the Cu(II) ion with liquid-crystalline poly(propylene imine) dendrimer ligand (L) of the first (complex 1) and second (complex 2) generations with various Cu(II) contents (x = Cu/L) have been studied by electron paramagnetic resonance (EPR) spectroscopy. The existence of a redox-active blue complex 1 (x = 1.9) and the copper(II) nitrate electron transfer associated with the valence tautomerism are revealed for the first time in copper-based dendrimers. It has been shown that the electronic structure of the blue complex 1 (x = 1.9) is adequately described as a mixed-valence dimer containing d9- and diamagnetic d10-configurated copper ions, and an antiferromagnetically coupled NO3* radical arising on the nitrate-bridged counter ligand. The activation energy value found for the electron transfer is about 0.35 meV, which indicates a low-energy charge dynamic. The ability of the blue and green complexes 1 (x = 1.9) dissolved in isotropic solvents to orient themselves in the magnetic field was revealed by EPR spectroscopy. The degree of orientation of the molecular z axis (S(z)) of these complexes in the magnetic field differs, depending on the type of copper(II)-complexing site in the dendrimer ligand, and can reach 0.76, which is close to S(z) = 1 (completely aligned system). A combination of magnetic and orientational parameters indicates an NO4 environment of the Cu(II) ion in green complex 1 (x = 1.9), and confirms the chain structure with intermolecular Cu(II)-NO3-Cu(II) bridges between Cu(II) centres in columns.     

Computational studies on the solvolysis of the chemical warfare agent VX

The reaction of the chemical warfare agent VX with hydroxide and hydroperoxide has been studied using a combination of correlated molecular orbital and density functional theory. It is found that the alkaline hydrolysis leads to a mixture of neurotoxic and non‐toxic products while hydroperoxidolysis leads to exclusive formation of non‐toxic products. Natural bond orbital (NBO) analysis is used to rationalize the observation that hydroxide will attack opposite the alkoxide ligand, while hydroperoxide will attack opposite the thiolate. The current results are in good agreement with previous experimental and computational work and serve to clarify the mechanism for destruction of this highly potent nerve agent. Copyright © 2008 John Wiley & Sons, Ltd.     

New insights on testing the efficiency of methods of pricing and hedging American options

With reference to the evaluation of the speed–precision efficiency of pricing and hedging of American Put options, we present and discuss numerical results obtained on the basis of four different large enough random samples according to the relevance of the American quality (relative importance of the early exercise opportunity) of the options. Here we provide a comparison of the best methods (lattice based numerical methods and an approximation of the American Premium analytical procedure) known in literature along with some key methodological remarks.     

Correlative organelle fluorescence microscopy and synchrotron X-ray chemical element imaging in single cells

X-ray chemical element imaging has the potential to enable fundamental breakthroughs in the understanding of biological systems because chemical element interactions with organelles can be studied at the sub-cellular level. What is the distribution of trace metals in cells? Do some elements accumulate within sub-cellular organelles? What are the chemical species of the elements in these organelles? These are some of the fundamental questions that can be addressed by use of X-ray chemical element imaging with synchrotron radiation beams. For precise location of the distribution of the elements, identification of cellular organelles is required; this can be achieved, after appropriate labelling, by use of fluorescence microscopy. As will be discussed, this approach imposes some limitations on sample preparation. For example, standard immunolabelling procedures strongly modify the distribution of the elements in cells as a result of the chemical fixation and permeabilization steps. Organelle location can, however, be performed, by use of a variety of specific fluorescent dyes or fluorescent proteins, on living cells before cryogenic fixation, enabling preservation of element distribution. This article reviews the methods used for fluorescent organelle labelling and X-ray chemical element imaging and speciation of single cells. Selected cases from our work and from other research groups are presented to illustrate the potential of the combination of the two techniques. Figure

Synchrotron X-ray fluorescence distribution maps of Ca, P and S in yeast cells. Elemental distribution maps (green color scale) were combined with the image of vacuoles labeled with Arg-CMAC (red color scale). The yellow signal of superposed images shows that Ca and P are preferentially located within the vacuole.     

Using Room Temperature Phosphorescence of Gold(I) Complexes for PAHs Sensing

The synthesis of two new phosphane-gold(I)–napthalimide complexes has been performed and characterized. The compounds present luminescent properties with denoted room temperature phosphorescence (RTP) induced by the proximity of the gold(I) heavy atom that favors intersystem crossing and triplet state population. The emissive properties of the compounds together with the planarity of their chromophore were used to investigate their potential as hosts in the molecular recognition of different polycyclic aromatic hydrocarbons (PAHs). Naphthalene, anthracene, phenanthrene, and pyrene were chosen to evaluate how the size and electronic properties can affect the host:guest interactions. Stronger affinity has been detected through emission titrations for the PAHs with extended aromaticity (anthracene and pyrene) and the results have been supported by DFT calculation studies.     

Palladium(II) and platinum(II) organometallic complexes with 4,7-dihydro-5-methyl-7-oxo[1,2,4]triazolo[1,5-a]pyrimidine. Antitumor activity of the platinum compounds

Palladium and platinum complexes with HmtpO (where HmtpO=4,7-dihydro-5-methyl-7-oxo[1,2,4]triazolo[1,5-a]pyrimidine, an analogue of the natural occurring nucleobase hypoxanthine) of the types [M(dmba)(PPh3)(HmtpO)]ClO4[dmba=N,C-chelating 2-(dimethylaminomethyl)phenyl; M=Pd or Pt], [Pd(N-N)(C6F5)(HmtpO)]ClO4[N-N=2,2'-bipyridine (bpy), 4,4'-dimethyl-2,2'-bipyridine (Me2bpy), or N, N, N', N'-tetramethylethylenediamine (tmeda)] and cis-[M(C6F5)2(HmtpO)2] (M=Pd or Pt) (head-to-head atropisomer in the solid state) have been obtained. Pd(II) and Pt(II) complexes with the anion of HmtpO of the types [Pd(tmeda)(C6F5)(mtpO)], [Pd(dmba)(micro-mtpO)] 2, and [NBu4]2[M(C6F5)2(micro-mtpO)]2(M=Pd or Pt) have been prepared starting from the corresponding hydroxometal complexes. Complexes containing simultaneously both the neutral HmtpO ligand and the anionic mtpO of the type [NBu4][M(C6F5)2(HmtpO)(mtpO)] (M=Pd or Pt) have been also obtained. In these mtpO-HmtpO metal complexes, for the first time, prototropic exchange is observed between the two heterocyclic ligands. The crystal structures of [Pd(dmba)(PPh 3)(HmtpO)]+, cis-[Pt(C6F5)2(HmtpO)2].acetone, [Pd(C6F5)(tmeda)(mtpO)].2H2O, [Pd(dmba)(micro-mtpO)]2, [NBu4]2[Pd(C6F5)2(micro-mtpO)]2.CH2Cl2.toluene, [NBu4]2[Pt(C6F5)2(micro-mtpO)](2).0.5(toluene), and [NBu4][Pt(C6F5)2(mtpO)(HmtpO)] have been established by X-ray diffraction. Values of IC50 were calculated for the new platinum complexes cis-[Pt(C6F5)2(HmtpO)2] and [Pt(dmba)(PPh3)(HmtpO)]ClO4 against a panel of human tumor cell lines representative of ovarian (A2780 and A2780 cisR), lung (NCI-H460), and breast cancers (T47D). At 48 h incubation time, both complexes were about 8-fold more active than cisplatin in T47D and show very low resistance factors against an A2780 cell line, which has acquired resistance to cisplatin. The DNA adduct formation of cis-[Pt(C6F5)2(HmtpO)2] and [Pt(dmba)(PPh3)(HmtpO)]ClO4 was followed by circular dichroism and electrophoretic mobility. Atomic force microscopy images of the modifications caused by these platinum complexes on plasmid DNA pB R322 were also obtained.     

Transverse vibrations of thin,elastic plates with concentrated masses and internal elastic supports

The fundamental frequency of vibration of a plate carrying concentrated masses and with internal elastic supports is determined. The case of an orthotropic, rectangular plate elastically restrained against rotation along the four edges is tackled first by using simple polynomial approximations and the Galerkin method. Then, vibrations of clamped and simply supported isotropic plates of regular polygonal shape are studied by using the conformal mapping technique coupled with the variational method. Finally the case of a circular plate elastically restrained against translation and rotation is considered.