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排序方式: 共有473条查询结果,搜索用时 468 毫秒
71.
Suzuki T Zhang YW Koyama T Sasaki DY Kurihara K 《Journal of the American Chemical Society》2006,128(47):15209-15214
The substrate-enzyme complexation of heptaprenyl diphosphate synthase was directly investigated using colloidal probe atomic force microscopy (AFM) and a quartz crystal microbalance (QCM) in order to obtain new insights into the molecular mechanism of the enzyme reaction. This enzyme is composed of two dissociable subunits that exhibit a catalytic activity only when they are associated together in the presence of a cofactor, Mg2+, and a substrate, farnesyl diphosphate (FPP). The QCM measurement revealed that FPP was preferentially bound to subunit II in the presence of Mg2+, while the AFM measurement showed that the adhesive force between the subunits was observed only in the presence of both Mg2+ and FPP. This is the first direct demonstration of the specific interaction involved in the enzyme reaction. The dependence of the Mg2+ concentration on the specific interaction between subunits I and II well agreed with that on the enzyme activity of heptaprenyl diphosphate synthase. This indicated that the observed adhesive forces were indeed involved in the catalytic reaction of this enzyme. On the basis of these results, we discussed the processes involved in the substrate-enzyme complexation. The first, the substrate FPP bound to subunit II using Mg2+, followed by the formation of the subunit I-FPP-Mg2+-subunit II complex. Our study showed a very useful methodology for examining the elemental processes of biological reactions such as an enzyme reaction. 相似文献
72.
Aoyagi Y Takahashi Y Fukaya H Takeya K Aiyama R Matsuzaki T Hashimoto S Kurihara T 《Chemical & pharmaceutical bulletin》2006,54(11):1602-1604
Isetexane diterpene analogues were semisynthesized from demethylsalvicanol isolated from Perovskia abrotanoides (Labiatae). The structure and cytotoxic activity relationships (SAR) of the natural parent diterpene, demethylsalvicanol, and its semisynthetic analogues were studied by using P388 murine leukemia cells. 相似文献
73.
Nakayama T Kamachi T Jitsumori K Omi R Hirotsu K Esaki N Kurihara T Yoshizawa K 《Chemistry (Weinheim an der Bergstrasse, Germany)》2012,18(27):8392-8402
The high substrate specificity of fluoroacetate dehalogenase was explored by using crystallographic analysis, fluorescence spectroscopy, and theoretical computations. A crystal structure for the Asp104Ala mutant of the enzyme from Burkholderia sp. FA1 complexed with fluoroacetate was determined at 1.2 ? resolution. The orientation and conformation of bound fluoroacetate is different from those in the crystal structure of the corresponding Asp110Asn mutant of the enzyme from Rhodopseudomonas palustris CGA009 reported recently (J. Am. Chem. Soc. 2011, 133, 7461). The fluorescence of the tryptophan residues of the wild-type and Trp150Phe mutant enzymes from Burkholderia sp. FA1 incubated with fluoroacetate and chloroacetate was measured to gain information on the environment of the tryptophan residues. The environments of the tryptophan residues were found to be different between the fluoroacetate- and chloroacetate-bound enzymes; this would come from different binding modes of these two substrates in the active site. Docking simulations and QM/MM optimizations were performed to predict favorable conformations and orientations of the substrates. The F atom of the substrate is oriented toward Arg108 in the most stable enzyme-fluoroacetate complex. This is a stable but unreactive conformation, in which the small O-C-F angle is not suitable for the S(N)2 displacement of the F(-) ion. The cleavage of the C-F bond is initiated by the conformational change of the substrate to a near attack conformation (NAC) in the active site. The second lowest energy conformation is appropriate for NAC; the C-O distance and the O-C-F angle are reasonable for the S(N) 2 reaction. The activation energy is greatly reduced in this conformation because of three hydrogen bonds between the leaving F atom and surrounding amino acid residues. Chloroacetate cannot reach the reactive conformation, due to the longer C-Cl bond; this results in an increase of the activation energy despite the weaker C-Cl bond. 相似文献
74.
Kurihara H Lu X Iiduka Y Nikawa H Mizorogi N Slanina Z Tsuchiya T Nagase S Akasaka T 《Journal of the American Chemical Society》2012,134(6):3139-3144
Little is known about the chemical properties of carbide cluster metallofullerenes (CCMFs). Here we report the photochemical reaction of a newly assigned CCMF Sc(2)C(2)@C(2v)(5)-C(80) with 2-adamantane-2,3-[3H]-diazirine (AdN(2), 1), which provides a carbene reagent under irradiation. Five monoadduct isomers (2a-2e), with respective abundances of 20%, 40%, 25%, 5%, and 10%, were isolated and characterized with a combination of experimental techniques including unambiguous single-crystal X-ray crystallography. Results show that the two Sc atoms of the bent Sc(2)C(2) cluster tend to move in most cases, whereas the C(2)-unit is almost fixed. Accordingly, it is difficult to explain the addition patterns by considering the strain and charge density on the cage with a fixed cluster, and thus a moving cluster may account for the addition patterns. These results show that the situation of CCMFs is more complicated than those in other metallofullerenes. Furthermore, a thermal isomerization process from 2b to 2c was observed, confirming that the most abundant isomer 2b is a kinetically favored adduct. Finally, it is revealed that the electronic and electrochemical properties of pristine Sc(2)C(2)@C(2v)(5)-C(80) have been markedly altered by exohedral modification. 相似文献
75.
Dr. Yosuke Demizu Prof. Mitsunobu Doi Dr. Masaaki Kurihara Prof. Tokumi Maruyama Prof. Hiroshi Suemune Prof. Masakazu Tanaka 《Chemistry (Weinheim an der Bergstrasse, Germany)》2012,18(8):2430-2439
Chiral cyclic α,α‐disubstituted amino acids, (3S,4S)‐ and (3R,4R)‐1‐amino‐3,4‐(dialkoxy)cyclopentanecarboxylic acids ((S,S)‐ and (R,R)‐Ac5cdOR; R: methyl, methoxymethyl), were synthesized from dimethyl L ‐(+)‐ or D ‐(?)‐tartrate, and their homochiral homoligomers were prepared by solution‐phase methods. The preferred secondary structure of the (S,S)‐Ac5cdOMe hexapeptide was a left‐handed (M) 310 helix, whereas those of the (S,S)‐Ac5cdOMe octa‐ and decapeptides were left‐handed (M) α helices, both in solution and in the crystal state. The octa‐ and decapeptides can be well dissolved in pure water and are more α helical in water than in 2,2,2‐trifluoroethanol solution. The left‐handed (M) helices of the (S,S)‐Ac5cdOMe homochiral homopeptides were exclusively controlled by the side‐chain chiral centers, because the cyclic amino acid (S,S)‐Ac5cdOMe does not have an α‐carbon chiral center but has side‐chain γ‐carbon chiral centers. 相似文献
76.
Hyung Woo Choi Yasuhiko Sakata Yoshikazu Kurihara Tooru Ooya Toshifumi Takeuchi 《Analytica chimica acta》2012
Reflectometric interference spectroscopy (RIfS) is a label-free, time-resolved technique, and suitable for detecting antibody–antigen interaction. This work describes a continuous flow biosensor for C-reactive protein (CRP), involving an effective immobilization method of a monoclonal antibody against CRP (anti-CRP) to achieve highly sensitive RIfS-based detection of CRP. The silicon nitride-coated silicon chip (SiN chip) for the RIfS sensing was first treated with trimethylsilylchloride (TMS), followed by UV-light irradiation to in situ generation of homogeneous silanols on the surface. Following amination by 3-aminopropyltriethoxysilane, carboxymethyldextran (CMD) was grafted, and subsequently, protein A was immobilized to create the oriented anti-CRP surface. The immobilization process of protein A and anti-CRP was monitored with the RIfS system by consecutive injections of an amine coupling reagent, protein A and anti-CRP, respectively, to confirm the progress of each step in real time. The sensitivity was enhanced when all of the processes were adopted, suggesting that the oriented immobilization of anti-CRP via protein A that was coupled with the grafted CMD on the aminated surface of TMS-treated SiN chip. The feasibility of the present sensing system was demonstrated on the detection of CRP, where the silicon-based inexpensive chips and the simple optical setup were employed. It can be applied to other target molecules in various fields of life science as a substitute of surface plasmon resonance-based expensive sensors. 相似文献
77.
Y. Kurihara J. Fujimoto T. Ishikawa Y. Shimizu K. Kato K. Tobimatsu T. Munehisa 《The European Physical Journal C - Particles and Fields》2001,20(2):253-258
A parton shower method for the photonic radiative correction is applied to single W-boson production processes. The energy scale for the evolution of the parton shower is determined so that the correct soft-photon
emission is reproduced. Photon spectra radiated from the partons are compared with those from the exact matrix elements, and
show a good agreement. Possible errors due to an inappropriate energy-scale selection or due to the ambiguity of the energy-scale
determination are also discussed, particularly for the measurements on triple gauge couplings.
Received: 22 February 2001 / Published online: 11 May 2001 相似文献
78.
Structural conversion and spin separation in Bis(ferrocenylethynyl)anthraquinones triggered by proton-coupled intramolecular electron transfer. 总被引:1,自引:0,他引:1
M Murata M Yamada T Fujita K Kojima M Kurihara K Kubo Y Kobayashi H Nishihara 《Journal of the American Chemical Society》2001,123(51):12903-12904
79.
80.
Akihiro Ohta Masami Inoue Junichi Yamada Yasuhiko Yamada Teruo Kurihara Toshihiro Honda 《Journal of heterocyclic chemistry》1984,21(1):103-106
Some 2,3-diphenylpyrazine 1-oxides were heated with acetic anhydride to give the corresponding 2,3-di-acetoxy-2,3-dihydro-5,6-diphenylpyrazines. By X-ray diffraction analysis, the configuration of two acetoxyl groups was determined to be trans. 相似文献