Mutation detection in the drug-resistant hepatitis B virus polymerase gene using nanostructured reverse micelles.

The emergence of drug-resistant hepatitis B virus (HBV) has been reported in patients with prolonged administration of lamivudine, which is a potent drug for the prevention of HBV infection. Lamivudine-resistant HBV has several types of mutations at the YMDD motif of its DNA polymerase. We successfully demonstrated that monitoring the hybridization behavior in nanostructured reverse micelles enables us to detect single nucleotide polymorphisms (SNPs). With the aid of reverse micelles, a model 40-mer oligonucleotide containing a single-base substitution was clearly distinguished from the normal, complementary oligonucleotide. In addition, we extended this technique to a high-throughput analysis. The results obtained with a 96-well micro-plate reader indicated the possibility of SNPs detection toward multiple samples of patients.     

An enrichment method of molybdenum on a cellulose nitrate resin for the determination by electrothermal atomic absorption spectrometry coupled with the resin suspension injection.

Cellulose derivative resin (CDR) suspensions containing resin particles of cellulose nitrate (CDR(CN)), cellulose acetate (CDR(CA)), or cellulose triacetate (CDR(CTA)) were prepared as the sorbent for resin suspension injection (RSI) electrothermal atomic absorption spectrometry (ETAAS), in which fine resin particles holding a desired trace element were directly injected into the graphite tube as the suspension. To compare the sorption ability, the distribution ratios of the Mo(VI)-phenylfluorone complex were measured between the aqueous phase and the sorbents, including the CDRs mentioned above and the finely divided anion exchange resin (AR). The results showed that the sorption ability decreases in the following order: CDR(CN) > or = AR > CDR(CA) > or = CDR(CTA). It was concluded that CDR(CN) was able to extract more than 98% of Mo(VI), and was suitable for RSI-ETAAS as well as AR. CDR(CN) was used for the determination of Mo in NIES certified reference materials, No. 10 Rice flour-unpolished; the results showed fairly good agreements between the analytical values and the certified values.     

Addition–fragmentation chain transfer: Molecular weight distributions and retardation in the system methyl methacrylate/methyl α‐(bromomethyl)acrylate

A detailed investigation of addition–fragmentation chain transfer (AFCT) in the free‐radical polymerization of methyl methacrylate (MMA) in the presence of methyl α‐(bromomethyl)acrylate (MBMA) was carried out to elucidate mechanistic details with efficient macromonomer synthesis as an underlying goal. Advanced modeling techniques were used in connection with the experimental work. Curve fitting of simulated and experimental molecular weight distributions with respect to the rate coefficient for addition of propagating radicals to MBMA (k_add) over 60–120 °C resulted in E_add = 21.7 kJ mol^?1 and A_add = 2.18 × 10⁶ M^?1 s^?1 and a very weak temperature dependence of the chain‐transfer constant (E_add ≈ E_p). The rate coefficient for fragmentation of adduct radicals at 60 °C was estimated as k_f ≈ 39 s^?1 on the basis of experimental data of the MMA conversion and the concentration of 2‐carbomethoxy‐2‐propenyl end groups. The approach developed is generic and can be applied to any AFCT system in which copolymerization does not occur and in which the resulting unsaturated end groups do not undergo further reactions. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 2640–2650, 2004     

The surface activity of the lower homologues of n-alkylammonium chlorides in aqueous solutions. Effect of hydrophobic hydration

Summary The surface tensions of aqueous solutions ofn-alkylammonium chlorides (methyl to hexyl) have been measured at 25 °C. With methylammonium chloride the surface tension increased with concentration, whereas with ethylammonium chloride and higher homologues, the surface tension decreased with concentration. The results suggest that this transition is attributed to the effect of hydrophobic hydration. For propylammonium chloride and higher homologues, the relation between the surface tension lowering da and the concentrationC in the range of 0–10 dyne/cm, can be expressed by the equation; = AC + BC, whereA andB are constants. The surface tension coefficientB has been found to increase approximately twofold for each additional CH₂ group of alkyl chain.

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Zusammenfassung Es wurden die Oberflächenspannungen wäßriger Lösungen vonn-Alkylammoniumchloriden (Methyl- bis Hexylammoniumchloride) bei 25 °C gemessen. Für Methylammoniumchlorid nimmt die Oberflächenspannung mit der Konzentration zu, aber bei allen höheren Homologen mit der Konzentration ab. Die Ergebnisse deuten darauf hin, daß dieser Übergang durch die hydrophobe Hydration bedingt wird. Für Propylammonium-chlorid und die höheren Homologen wird die Beziehung zwischen der Erniedrigung der Oberflächenspannung und der KonzentrationC in dem Bereich von 1 bis 10 dyn/cm durch die folgende Gleichung ausgedrückt: = AC + BC (A undB sind Konstanten). Es wurde gefunden, daß B für jede zusätzliche CH₂-Gruppe etwa um den Faktor 2 größer wird.

     

The crystal structure and absolute configuration of the antitumor platinum complex trans(OH)-Pt(OH)2(malonato)(1R,2R-cyclohexanediamine).

The absolute configuration of the anti-tumor complex trans(OH)-Pt(OH)2(malonato)(1R,2R-cyclohexanediamine) was determined by X-ray anomalous scattering technique. The final unit cell was monoclinic, space group P2(1) with a = 9.142 A, b = 7.788 A, c = 11.946 A, beta = 96.48 degrees, Z = 2. The crystal structure was determined by direct method and difference Fourier synthesis, and refined to R = 0.025 and Rw = 0.033 based on 2768 independent reflections. The platinum atom has roughly octahedral coordination. The cyclohexane ring has the expected chair configuration, with two amino groups in equatorial positions while the malonato ligand, in contrast, shows a boat conformation for six membered Pt O-C-C-C-O ring.     

Studies on steroids. CCLIII. Capillary gas chromatographic behaviour of diethylhydrogensilyl-diethylsilylene derivatives of stereoisomeric bile acids.

The capillary gas chromatographic behaviour of diethylhydrogensilyl (DEHS) ethers and/or diethylsilylene (DES) derivatives of fifty bile acids including 4- and 6-hydroxylated compounds is described. The methylene unit (MU) values of methyl and pentafluorobenzyl esters of bile acids were determined as their trimethylsilyl (TMS), dimethylethylsilyl (DMES) ethers and DEHS-DES derivatives. The differences in methylene unit values between the corresponding TMS ethers and DMES ethers or DEHS-DES derivatives were used for estimating the number and stereochemistry of hydroxyl groups on the steroid nucleus. On treatment with the silylating agent N,O-bis (diethylhydrogensilyl)trifluoroacetamide, bile acids possessing isolated hydroxyl in addition to diaxial trans-glycol groups were easily converted into the DEHS ehters, whereas those having a vicinal glycol group except for the diaxial group were converted into cyclic DES derivatives. The mass spectrometric properties obtained with negative-ion chemical ionization detection are discussed.     

Dielectric relaxation in the paracrystalline phase in polyacrylonitrile

Thermal expansion and dielectric relaxation of polyacrylonitrile were measured in the temperature range from ?75 to 152°C. at frequencies from 30 cps to 3 Mc./sec. The thermal expansion curve and the temperature dependence of logarithmic relaxation time both show an inflection at 85°C. An x-ray study by Bohn reveals that this inflection comes from the thermal expansion of the paracrystalline phase of this polymer, and consequently the transition at 85°C. and the associated relaxation are ascribed to molecular motion in the paracrystalline phase. The relaxation strength increases with increasing temperature above this point. The transition is caused by freezing of the bending vibration of chains whereas the relaxation results from rotational vibration. The length of segments in this phase is roughly estimated to be ca. 100 A. by comparing the observed relaxation strength with the theory developed on the basis of the above considerations.     

Synthesis of peptides and oligosaccharides by using a recyclable fluorous tag

A hexakis(fluorous chain)-type alcohol was used in the synthesis of oligosaccharides and peptides through connection with a linker suitable for the particular type of target compound. After the preparation of the desired compound, the fluorous alcohol was easily recovered in good yields under basic conditions. It appears that the fluorous alcohol can be recovered, recycled, and reused.     

Computer simulation for the cooligomerization system

In order to clarify the kinetic features of the styrene (A)–methyl methacrylate (B)–CCl₄(S) cooligomerization system, a computer simulation was carried out. The experimental data on the degree of polymerization and the deviation of the cooligomer composition from the statistical steady-state composition were comparatively well explained by calculations based on the kinetic equations derived from the assumed reaction scheme and the values of the velocity coefficients, although the values of the four velocity coefficients in the initiation step and the velocity coefficient of the termination by the coupling of two solvent radicals were estimated. The results of the calculation of the rate of each component reaction show that the following two reactions are the most important in the initiation and in the transfer and termination steps when the [S]/([A] + [B]) ratio is large: where, A, A*, and P are styrene, polystyryl radical, and the cooligomer, respectively. Moreover, it was concluded that the deviation of the cooligomer composition from the statistical steady-state composition was caused by these two reactions.