MALDI MSI Reveals the Spatial Distribution of Protein Markers in Tracheobronchial Lymph Nodes and Lung of Pigs after Respiratory Infection

Respiratory infections are a real threat for humans, and therefore the pig model is of interest for studies. As one of a case for studies, Actinobacillus pleuropneumoniae (APP) caused infections and still worries many pig breeders around the world. To better understand the influence of pathogenic effect of APP on a respiratory system—lungs and tracheobronchial lymph nodes (TBLN), we aimed to employ matrix-assisted laser desorption/ionization time-of-flight mass spectrometry imaging (MALDI-TOF MSI). In this study, six pigs were intranasally infected by APP and two were used as non-infected control, and 48 cryosections have been obtained. MALDI-TOF MSI and immunohistochemistry (IHC) were used to study spatial distribution of infectious markers, especially interleukins, in cryosections of porcine tissues of lungs (necrotic area, marginal zone) and tracheobronchial lymph nodes (TBLN) from pigs infected by APP. CD163, interleukin 1β (IL-1β) and a protegrin-4 precursor were successfully detected based on their tryptic fragments. CD163 and IL-1β were confirmed also by IHC. The protegrin-4 precursor was identified by MALDI-TOF/TOF directly on the tissue cryosections. CD163, IL-1β and protegrin-4 precursor were all significantly (p < 0.001) more expressed in necrotic areas of lungs infected by APP than in marginal zone, TBLN and in control lungs.     

Electrically Switchable Magnetic Molecules: Inducing a Magnetic Coupling by Means of an External Electric Field in a Mixed‐Valence Polyoxovanadate Cluster

Herein we evaluate the influence of an electric field on the coupling of two delocalized electrons in the mixed‐valence polyoxometalate (POM) [GeV₁₄O₄₀]^8? (in short V₁₄) by using both a t‐J model Hamiltonian and DFT calculations. In absence of an electric field the compound is paramagnetic, because the two electrons are localized on different parts of the POM. When an electric field is applied, an abrupt change of the magnetic coupling between the two delocalized electrons can be induced. Indeed, the field forces the two electrons to localize on nearest‐neighbors metal centers, leading to a very strong antiferromagnetic coupling. Both theoretical approaches have led to similar results, emphasizing that the sharp spin transition induced by the electric field in the V₁₄ system is a robust phenomenon, intramolecular in nature, and barely influenced by small changes on the external structure.     

Low energy and low dose electron irradiation of potassium–lime–silicate glass investigated by XPS. I. Surface composition

X-ray induced photoelectron spectroscopy has been used to study the influence of low-energy electron beam on the pristine potassium–lime–silicate glass surface prepared by fracturing in situ under ultrahigh vacuum. Relatively low-energy electron beam of 1600 eV with low-electron beam current density of 0.02–0.22 A/m² and low-electron dose of 29–5200 C/m² was used. The expected modified near-surface region thickness is in this case comparable with the mean sampling depth of the analytical tool. Therefore, possible changes and modifications due to electron irradiation could be recorded with high sensitivity. The freshly fractured glass surface was found to be significantly enriched with potassium, and slightly with calcium. As a consequence of the lowest electron dose irradiation used, the potassium signal substantially increased by a factor 1.24 relative to the value found for the fresh surface. For higher doses used, the potassium signal continuously increased with the dose to a maximum and decreased thereafter. This variation was accompanied with the qualitative opposite behaviour of calcium signal. The concentrations of the other elements present in the glass, oxygen and silicon, varied only slightly with the electron dose. They can be considered to be constant within experimental uncertainty. In agreement with experimental results, a model assuming mobility of only two most mobile cations, potassium and calcium, was suggested. The models assuming one layer and two layers on the bulk were developed. Their results reproduce well experimental findings: (i) the formation of a potassium-rich surface layer, and (ii) the opposite-like signal variation of calcium in comparison with potassium.     

Biocompatible Size‐Defined Dendrimer–Albumin Binding Protein Hybrid Materials as a Versatile Platform for Biomedical Applications

For the design of a biohybrid structure as a ligand‐tailored drug delivery system (DDS), it is highly sophisticated to fabricate a DDS based on smoothly controllable conjugation steps. This article reports on the synthesis and the characterization of biohybrid conjugates based on noncovalent conjugation between a multivalent biotinylated and PEGylated poly(amido amine) (PAMAM) dendrimer and a tetrameric streptavidin‐small protein binding scaffold. This protein binding scaffold (SA‐ABDwt) possesses nM affinity toward human serum albumin (HSA). Thus, well‐defined biohybrid structures, finalized by binding of one or two HSA molecules, are available at each conjugation step in a controlled molar ratio. Overall, these biohybrid assemblies can be used for (i) a controlled modification of dendrimers with the HSA molecules to increase their blood‐circulation half‐life and passive accumulation in tumor; (ii) rendering dendrimers a specific affinity to various ligands based on mutated ABD domain, thus replacing tedious dendrimer–antibody covalent coupling and purification procedures.

     

Real‐Time Nanomicroscopy via Three‐Dimensional Single‐Particle Tracking

We developed a new method for real‐time, three‐dimensional tracking of fluorescent particles. The instrument is based on a laser‐scanning confocal microscope where the focus of the laser beam is scanned or orbited around the particle. Two confocal pinholes are used to simultaneously monitor regions immediately above and below the particle and a feedback loop is used to keep the orbit centered on the particle. For moderate count rates, this system can track particles with 15 nm spatial resolution in the lateral dimensions and 50 nm in the axial dimension at a temporal resolution of 32 ms. To investigate the interaction of the tracked particles with cellular components, we have combined our orbital tracking microscope with a dual‐color, wide‐field setup. Dual‐color fluorescence wide‐field images are recorded simultaneously in the same image plane as the particle being tracked. The functionality of the system was demonstrated by tracking fluorescent‐labeled artificial viruses in tubulin‐eGFP expressing HUH7 cells. The resulting trajectories can be used to investigate the microtubule network with super resolution.     

Antibandwidth and cyclic antibandwidth of meshes and hypercubes

The antibandwidth problem consists of placing the vertices of a graph on a line in consecutive integer points in such a way that the minimum difference of adjacent vertices is maximised. The problem was originally introduced in [J.Y.-T. Leung, O. Vornberger, J.D. Witthoff, On some variants of the bandwidth minimisation problem, SIAM Journal of Computing 13 (1984) 650-667] in connection with the multiprocessor scheduling problems and can also be understood as a dual problem to the well-known bandwidth problem, as a special radiocolouring problem or as a variant of obnoxious facility location problems. The antibandwidth problem is NP-hard, there are a few classes of graphs with polynomial time complexities. Exact results for nontrivial graphs are very rare. Miller and Pritikin [Z. Miller, D. Pritikin, On the separation number of a graph, Networks 19 (1989) 651-666] showed tight bounds for the two-dimensional meshes and hypercubes. We solve the antibandwidth problem precisely for two-dimensional meshes, tori and estimate the antibandwidth value for hypercubes up to the third-order term. The cyclic antibandwidth problem is to embed an n-vertex graph into the cycle C_n, such that the minimum distance (measured in the cycle) of adjacent vertices is maximised. This is a natural extension of the antibandwidth problem or a dual problem to the cyclic bandwidth problem. We start investigating this invariant for typical graphs and prove basic facts and exact results for the same product graphs as for the antibandwidth.     

Effect of uni-axial loading on the nanostructure of silica aerogels

Aerogels are unique materials offering a combination of remarkable properties that make them useful in a wide range of applications. However, aerogel materials can be difficult to work with because they are fragile. The intent of the work presented here was to study the relationship between axial loading and pore structure in aerogel material. Silica aerogel samples with a bulk density of 0.1 g/mL were compressed by uni-axial force loads from 1 to 5 kN which resulted in stress levels up to 23 MPa. The resulting change in the pore distribution was observed using nitrogen desorption analysis and scanning electron microscopy. Uncompressed aerogel samples exhibit peak pore volume at diameters of about 20 nm. As the aerogels are subjected to increased loading, the location of the peak volume moves to smaller diameters with a reduced volume of pores occurring above this diameter. The peak diameter, the average pore diameter and pore volume all decrease and scale with increasing maximum stress while the surface area of the aerogel samples remains unaffected at about 520 m²/g. When combined with data from the literature, the relation between maximum pore diameter and applied stress suggests a failure mechanism dominated by bending induced fracture.     

Introducing an amine group to calix[5]arene: comparison of several methods

Abstract

Chemists often use an amine group as an intermediate in syntheses of imines, amides and ureas; however, in the case of syntheses of p-aminophenol type compounds, several problems might occur. In this article, we prepared p-aminocalix[5]arene-pentaol by reduction of both nitro and azo derivatives, and compared four methods of the amine preparation, focusing mainly on its gramme scale and time-consuming issues.     

Novel approaches to analysis of 3-chloropropane-1,2-diol esters in vegetable oils

A sensitive and accurate method utilizing ultra-high performance liquid chromatography (U-HPLC) coupled to high resolution mass spectrometry based on orbitrap technology (orbitrapMS) for the analysis of nine 3-chloropropane-1,2-diol (3-MCPD) diesters in vegetable oils was developed. To remove the interfering triacylglycerols that induce strong matrix effects, a clean-up step on silica gel column was used. The quantitative analysis was performed with the use of deuterium-labeled internal standards. The lowest calibration levels estimated for the respective analytes ranged from 2 to 5 μg kg⁻¹. Good recovery values (89–120%) and repeatability (RSD 5–9%) was obtained at spiking levels of 2 and 10 mg kg⁻¹. As an alternative, a novel ambient desorption ionization technique, direct analysis in real time (DART), hyphenated with orbitrapMS, was employed for no separation, high-throughput, semi-quantitative screening of 3-MCPD diesters in samples obtained by chromatographic fractionation. Additionally, the levels of 3-MCPD diesters measured in real-life vegetable oil samples (palm oil, sunflower oil, rapeseed oil) using both methods are reported. Relatively good agreement of the data generated by U-HPLC-orbitrapMS and DART-orbitrapMS were observed. With regard to a low ionization yield achieved for 3-MCPD monoesters, the methods presented in this paper were not yet applicable for the analysis of these contaminants at the naturally occurring levels.