DNA-directed assembly of polyanilines: modified cytosine nucleotides transfer sequence programmability to a conjoined polymer

A series of polyaniline (PANI) oligomers was constructed from monomer units covalently linked to duplex DNA through N-(2-aminoethyl) groups bonded through cytosines. DNA oligomers containing the aniline monomers were treated with horseradish peroxidase (HRP) and H2O2 under conditions known to cause polymerization of aniline. No change in the absorption spectrum of the DNA was observed for samples containing fewer than four contiguous aniline groups. However, for oligomers containing four, five, or six aniline units, treatment with HRP and H2O2 led to the appearance of absorption features characteristic of the conducting "proton doped" emeraldine oxidation state of PANI. Molecular modeling shows that the DNA is distorted in the region of the PANI, but flanking regions of the DNA maintain their B-form structure. These findings provide a method to exploit the self-recognition, self-assembly, and sequence programmability of DNA for the formation of conducting polymers.     

Synthesis and characterization of disodium ethylenediaminetetraacetic acid capped and europium doped CdS nanoparticles

We present a novel two-step chemical synthesis route to produce of disodium ethylenediaminetetraacetic acid (EDTA) capped and europium doped CdS nanoparticles. First EDTA was applied to chelate with cadmium on the surface of cadmium-rich CdS nanoparticles and act as a capping agent. Further, the purified EDTA-capped particles were used to bind with Eu³⁺. The purified and redispersed particles were characterized by UV/vis absorption, photoluminescence, TEM and SEM. It was observed that Eu³⁺ on the nanoparticle surface significantly increased the band gap emission intensity of the CdS nanoparticles.     

Flammability Tests and Investigations of Properties of Lignin-Containing Polymer Composites Based on Acrylates

In this paper flammability tests and detailed investigations of lignin-containing polymer composites’ properties are presented. Composites were obtained using bisphenol A glycerolate (1 glycerol/phenol) diacrylate (BPA.GDA), ethylene glycol dimethacrylate (EGDMA), and kraft lignin (lignin alkali, L) during UV curing. In order to evaluate the influence of lignin modification and the addition of flame retardant compounds on the thermal resistance of the obtained biocomposites, flammability tests have been conducted. After the modification with phosphoric acid (V) lignin, as well as diethyl vinylphosphonate, were used as flame retardant additives. The changes in the chemical structures (ATR-FTIR), as well as the influence of the different additives on the hardness, thermal (TG) and mechanical properties were discussed in detail. The samples after the flammability test were also studied to assess their thermal destruction.     

Absolute configuration of tert-butyl-1-(2-methylnaphthyl)phosphine oxide

The enantiomers of tert-butyl-1-(2-methylnaphthyl)phosphine oxide 1 have been separated using a homemade HPLC column and an analytical gradient system. Vibrational absorption and circular dichroism spectra for both enantiomers have been measured in CD2Cl2 and CH2Cl2 solutions in the 2000-900 cm(-1) region. The fully relaxed potential energy surface of (S)-tert-butyl-1-(2-methylnaphthyl)phosphine oxide, obtained using the B3LYP functional with a 6-31G basis set, indicated two stable conformers with their populations in a approximately 2:1 ratio. The vibrational absorption and VCD spectra are predicted for these two conformers using the B3LYP functional with a 6-31G basis set. The comparison of predicted and experimental spectra indicated that (+)-tert-butyl-1-(2-methylnaphthyl)phosphine oxide is in the (S)-configuration. This assignment is supported by the ab initio prediction of positive optical rotation for the most stable conformer with an (S)-configuration and the nonequivalence sense of the tert-butyl group chemical shift observed in the 1H NMR spectrum of this enantiomer measured in the presence of (+)-(S)-mandelic acid as a chiral solvating agent.     

Determination of Selenium Species in Environmental Samples

 The essential nature of selenium as well as its toxicity depend on the concentration and the chemical forms in which this element is present in a given sample. Dissolved inorganic selenium can be found in natural water and soil as selenides, selenite and selenate. Organoselenium compounds present in air, soil and plants are volatile methylselenides, trimethylselenonium ion and several selenoamino acids. This review is a summary of recent research on the determination of selenium species in environmental samples such as water, air, soil and plants. Stability of selenium species in solutions and their storage is also discussed. In the metabolic pathway in the body selenide could act as the common intermediate for inorganic and organic Se sources as well as the checkpoint between further utilisation and excretion of selenium. Received May 30, 2001; accepted October 19, 2001; published online July 15, 2002     

Polycyclic 2H-Pyran Derivatives by Intramolecular Hetero-Diels-Alder Reactionsof a-Sulfur-Substituted a,b-UnsaturatedCarbonyl Compounds

Summary.  Reaction of 1-(phenylsulfenyl)-, 1-(phenylsulfinyl)-, and 1-(phenylsulfonyl)-2- propanones as well as 2-(phenylsulfonyl)-acetophenone with 2-(3-methyl-2-butenyloxy)- and 2-((E)-3-phenyl-2-propenyloxy)-benzaldehydes yielded the corresponding Knoevenagel condensation products. The latter compounds underwent intramolecular cycloadditions affording cis-fused 2H-pyran derivatives as the major products. Received June 29, 2000. Accepted July 18, 2000     

Theoretical study of the interaction between a high-valent manganese porphyrin oxyl-(hydroxo)-Mn(IV)-TMPyP and double-stranded DNA

Cationic porphyrin derivatives such as meso-tetrakis(4-N-methylpyridinium)porphyrin, TMPyP, have been shown to interact with double-stranded DNA. The manganese derivative, Mn(III)-TMPyP, activated by an oxygen donor like potassium monopersulfate, provides an efficient DNA-cleaving system. Previous experimental work1 has shown that DNA cleavage by the Mn(III)-TMPyP/KHSO(5) system was due to an oxidative attack, within the minor groove of B-DNA, at the C5' or C1' carbons of deoxyribose units. The aim of this study was to use molecular modeling to elucidate the specificity of the interactions between the transient active species oxyl-Mn(IV)-TMPyP and the DNA target. Geometric parameters, charges, and force field constants consistent with the AMBER 98 force field were calculated by DFT methods. Molecular modeling (mechanics and dynamic simulations) were performed for oxyl-(hydroxo)-Mn(IV)-TMPyP bound in the minor groove of the dodecamer d(5'-TCGTCAAACCGC)-d(5'-GCGGTTTGACGA). Geometry, interactions, and binding energy of the metalloporphyrin located at the A.T triplet region of the dodecamer were analyzed. These studies show no significant structural change of the DNA structure upon ligand binding. Mobility of the metalloporphyrin in the minor groove was restrained by the formation of a hydrogen bond between the hydroxo ligand trans to the metal-oxyl and a DNA phosphate, restricting the access of the oxyl group to the (pro-S) H atom at C5'.     

Hydrogen diffusivity,kinetics of H2O/H2 charge transfer and corrosion properties of LaNi5-powder,composite electrodes in 6 M KOH solution

Meticulous analysis of galvanostatic charge/discharge dependencies of the LaNi₅-based, powder composite electrode, in terms of determination of characteristic kinetic parameters of hydrogen storage electrode materials working in concentrated alkaline solution has been carried out. A special attention has been paid to the precise determination of charge and discharge times. The cathodic curves reveal their stepwise nature which allows to receive information of hydride material corrosion phenomena and determine the real time of atomic hydrogen absorption. The graphical way of determining of reduction times, based on differential cathodic curves is proposed. The knowledge of hydrogen absorption and desorption times allows to determine hydrogen diffusivity within the tested material with acceptable accuracy. The effect of external pressure (0.5–4 bar) on hydrogen absorption ability of LaNi₅-based material is also discussed. The exchange current density of H₂O/H₂ system distinctly increases with external pressure, at the same time, kind of gas atmosphere (Ar or H₂) scarcely affects the exchange current on the LaNi₅ electrode. The hydrogen capacity increases when the charge/discharge rate decreases. The reduction times of oxide phases formed during electrode discharge can be a measure of material corrosion rate. It is shown that the rate of LaNi₅ corrosion process strongly increases with the electrode cycling.     

Electro-oxidation of o-aminophenol studied by cyclic voltammetry and surface enhanced Raman scattering (SERS)

Cyclic voltammetry and surface enhanced Raman scattering (SERS) spectra were used over a wide pH range to examine the products of o-aminophenol oxidation on a roughened silver electrode. The results of the study indicated that at least two oxidation products are formed at the stationary potential of the electrode. The major product in alkaline and neutral media was identified as 2,2′-dihydroxyazobenzene, a linear dimer formed by N---N coupling of o-aminophenol cation radicals. In acidic solutions the cyclic dimer 3-aminophenoxazone formed by C---N coupling of o-aminophenol cation radicals dominates on the silver electrode.     

Physicochemical properties of cross-linked and acetylated starches and products of their hydrolysis in continuous recycle membrane reactor

The aim of the present work was to study the physicochemical properties of doubly modified, by cross-linking and acetylating, starches as well as the products of their enzymatic hydrolysis. A two step procedure of hydrolysis, including the batch and membrane reactors, were investigated. The second step of enzymatic processes were carried out in a continuous recycle membrane reactor (CRMR). Three kinds of commercial starches – two preparations of acetylated distarch adipate E1422 of different degrees of cross-linking, as well as one preparation of acetylated distarch phosphate E1414 were examined. It was found that the degree of substitution of acetyl groups in the macromolecules of starch did not influence the effectiveness of hydrolysis. However, the degree of cross-linking with adipate groups slightly decreased the efficiency of processing in the CRMR. Additionally, the relationship between the type of hydrocolloid and its adsorption activity in the air/water and oil/water systems was considered. All obtained derivatives revealed adsorption properties and reduced the surface/interface tension in the air/water and oil/water systems. The efficiency and effectiveness of adsorption of the investigated hydrocolloids were affected by the type of modification as well as the degree of substitution of acetyl groups in the macromolecules of starch. Particle size distributions formed in aqueous solutions for all investigated hydrolyses were determined and compared with results obtained for commercial products.