Methodology for the preparation of 2-argininylbenzothiazole

An efficient process to produce kilogram quantities of a key argininylbenzo[d]thiazole intermediate was developed for the preparation of the tryptase inhibitor RWJ-56423. A variety of activated arginine esters and benzo[d]thiazole nucleophiles were evaluated as coupling partners. Our work led to the selection and optimization of an argininyl imidazolide ester and benzothiazol-2-yl MgCl nucleophile. This paper focuses on the preparation, use, and stability of the benzothiazol-2-yl Grignard reagents.     

Identification and relative quantification of adenosine to inosine editing in serotonin 2c receptor mRNA by CE

A new method has been developed allowing the identification and relative quantification of different forms of mRNA after RNA editing. This method was applied to the serotonin 2c receptor mRNA that potentially exhibits 32 different forms after adenosine to inosine editing at five different sites located in a row of 13 nucleotides. CE was used to characterize fluorescently labeled ssDNA molecules on the basis of their conformational polymorphism. The relative amount of these 32 mRNA forms has been estimated by measuring the fluorescence intensity of each individual DNA strand. Accuracy of quantification was established by diluting one form into another or into a mixture of cDNA, showing linear and precise proportion of each form (0.06 相似文献   

Macrocyclization strategies in polyketide and nonribosomal peptide biosynthesis

Nonribosomal peptides and polyketides have attracted considerable attention in basic and applied research and have given rise to a multitude of therapeutic agents. The biological activity of many of these complex natural products, including for example the peptide antibiotics daptomycin and bacitracin or the polyketide anticancer agents epothilone and geldanamycin, specifically relies on the macrocyclization of linear acyl chains that form the backbone of these highly valuable molecules. The construction of the linear acyl precursors is accomplished by modular protein templates that follow comparable assembly line logic. As an enzymatic key step, macrocyclization is introduced after the consecutive condensation of amino acid or acyl-CoA building blocks by dedicated catalysts, and the mature product is released from the biosynthetic machinery. The diverse chain termination strategies of nonribosomal peptide and polyketide assembly lines, the structures and mechanisms of the versatile macrocyclization catalysts, and chemoenzymatic approaches for the development of new therapeutics are the focus of this review. Further, it is illustrated that macrocyclization is not restricted to secondary metabolites, but represents a commonly found structural motif of other biologically active proteins and peptides.     

Structural relaxation and metal-insulator transition at the interface between SrTiO3 and LaAlO3

The electronic structure of interfaces between LaAlO₃ and SrTiO₃ is studied using local spin density approximation (LSDA) with intra-atomic Coulomb repulsion (LSDA + U). We find that the nature of the interface metallic states is strongly affected by the type of the structure (sandwich or bilayer) and by the termination surface of LaAlO₃. In all structures the atomic relaxation plays a crucial role in the electronic properties of the system. While in sandwiches the structural relaxation produces a significant polarization in SrTiO₃ and a splitting of Ti 3d_xy orbitals, in AlO₂-terminated bilayers the relaxation occurs primarily in LaAlO₃ and results in an insulator-metal transition which has been observed experimentally with increasing thickness of the LaAlO₃ layer.     

Small quotients in Euclidean algorithms

Numbers whose continued fraction expansion contains only small digits have been extensively studied. In the real case, the Hausdorff dimension ?? _M of the reals with digits in their continued fraction expansion bounded by M was considered, and estimates of ?? _M for M???? were provided by Hensley (J. Number Theory 40:336?C358, 1992). In the rational case, first studies by Cusick (Mathematika 24:166?C172, 1997), Hensley (In: Proc. Int. Conference on Number Theory, Quebec, pp. 371?C385, 1987) and Vallée (J. Number Theory 72:183?C235, 1998) considered the case of a fixed bound M when the denominator N tends to ??. Later, Hensley (Pac. J. Math. 151(2):237?C255, 1991) dealt with the case of a bound M which may depend on the denominator N, and obtained a precise estimate on the cardinality of rational numbers of denominator less than N whose digits (in the continued fraction expansion) are less than M(N), provided the bound M(N) is large enough with respect to N. This paper improves this last result of Hensley towards four directions. First, it considers various continued fraction expansions; second, it deals with various probability settings (and not only the uniform probability); third, it studies the case of all possible sequences M(N), with the only restriction that M(N) is at least equal to a given constant M ₀; fourth, it refines the estimates due to Hensley, in the cases that are studied by Hensley. This paper also generalises previous estimates due to Hensley (J. Number Theory 40:336?C358, 1992) about the Hausdorff dimension ?? _M to the case of other continued fraction expansions. The method used in the paper combines techniques from analytic combinatorics and dynamical systems and it is an instance of the Dynamical Analysis paradigm introduced by Vallée (J. Théor. Nr. Bordx. 12:531?C570, 2000), and refined by Baladi and Vallée (J. Number Theory 110:331?C386, 2005).     

Large deviations for heavy-tailed random elements in convex cones

We prove large deviation results for sums of heavy-tailed random elements in rather general convex cones being semigroups equipped with a rescaling operation by positive real numbers. In difference to previous results for the cone of convex sets, our technique does not use the embedding of cones in linear spaces. Examples include the cone of convex sets with the Minkowski addition, positive half-line with maximum operation and the family of square integrable functions with arithmetic addition and argument rescaling.     

Bio‐based Biodegradable and Biocompatible Hyperbranched Polyurethane: A Scaffold for Tissue Engineering

Hyperbranched polyurethanes are synthesized using TDI, PCL diol, butanediol, and pentaerythritol (1–5 wt%) as the B₄ reactant with and without the monoglyceride of sunflower oil. The biodegradation, physico‐mechanical, and thermal properties are found to be tailored by varying the percentage weight of the branching unit. An MTT/hemolytic assay and subcutaneous implantation in Wistar rats followed by cytokine/ALP assay and histopathology studies confirm a better biocompatibility of HBPU with MG than without MG. HBPU supports the proliferation of dermatocytes with no toxic effect in major organs, in addition the in vitro degraded products are non‐toxic. Cell adherence and proliferation endorse the bio‐based HBPU as a prospective scaffold material in the niche of tissue engineering.

     

Sensitive routine liquid chromatography–tandem mass spectrometry method for serum estradiol and estrone without derivatization

The need for a routinely applicable assay to measure low estradiol levels in adult men, postmenopausal women, and young adolescents was recently discussed in an Endocrine Society position statement. Our aim was to develop a sensitive liquid chromatography–tandem mass spectrometry method for estradiol and estrone in human serum without the need for derivatization or extended extraction protocols. After protein precipitation of serum with a mixture of methanol/acetonitrile (85/15) (v/v) containing isotopic internal standards (17β-estradiol-16,16,17-d ₃ and estrone-2,3,4-¹³C), we quantified estradiol and estrone by two-dimensional liquid chromatography–tandem mass spectrometry with electrospray ionization in the negative mode monitoring 5?×?271.20→145.00 (17β-estradiol) and 269.20→145.00 (estrone). Sensitivity was increased by using fluoride and summation of 5 identical transitions for estradiol. Our method was analytically validated, compared against direct immunoassays using serum of 25 adult men, and clinically tested by measuring samples of 3 men at baseline and after chemical castration, 30 postmenopausal women and 15 patients receiving aromatase inhibitors. Total imprecision was below 20 % for the low quality controls. Limit of quantification was 1.3 ng/L (4.8 pmol/L) for estradiol and 1.2 ng/L (4.4 pmol/L) for estrone. Estradiol in Certified Reference Material BCR-576 was within specified uncertainty limits. No significant ion suppression or interference was observed. Our method showed modest correlation with direct immunoassay for estradiol (r ²?=?0.64) but no correlation for estrone (r ²?=?0.12). Patient sample results were within expected ranges. In conclusion, we developed a routinely applicable liquid chromatography–tandem mass spectrometry method for estradiol and estrone measurement which is sensitive enough for use in men, postmenopausal women, and young adolescents.