Anti-tumour promoting activity and antioxidant properties of girinimbine isolated from the stem bark of Murraya koenigii S

Girinimbine, a carbazole alkaloid isolated from the stem bark of Murraya koenigii was tested for the in vitro anti-tumour promoting and antioxidant activities. Anti-tumour promoting activity was determined by assaying the capability of this compound to inhibit the expression of early antigen of Epstein-Barr virus (EA-EBV) in Raji cells that was induced by the tumour promoter, phorbol 12-myristate 13-acetate. The concentration of this compound that gave an inhibition rate at fifty percent was 6.0 μg/mL and was not cytotoxic to the cells. Immunoblotting analysis of the expression of EA-EBV showed that girinimbine was able to suppress restricted early antigen (EA-R). However, diffused early antigen (EA-D) was partially suppressed when used at 32.0 μg/mL. Girinimbine exhibited a very strong antioxidant activity as compared to a-tocopherol and was able to inhibit superoxide generation in the 12-O-tetradecanoylphorbol-13-acetate (TPA)-induced differentiated premyelocytic HL-60 cells more than 95%, when treated with the compound at 5.3 and 26.3 μg/mL, respectively. However girinimbine failed to scavenge the stable diphenyl picryl hydrazyl (DPPH)-free radical.     

An Exact Penalty Method for Free Terminal Time Optimal Control Problem with Continuous Inequality Constraints

In this paper, we consider a class of optimal control problems with free terminal time and continuous inequality constraints. First, the problem is approximated by representing the control function as a piecewise-constant function. Then the continuous inequality constraints are transformed into terminal equality constraints for an auxiliary differential system. After these two steps, we transform the constrained optimization problem into a penalized problem with only box constraints on the decision variables using a novel exact penalty function. This penalized problem is then solved by a gradient-based optimization technique. Theoretical analysis proves that this penalty function has continuous derivatives, and for a sufficiently large and finite penalty parameter, its local minimizer is feasible in the sense that the continuous inequality constraints are satisfied. Furthermore, this local minimizer is also the local minimizer of the constrained problem. Numerical simulations on the range maximization for a hypersonic vehicle reentering the atmosphere subject to a heating constraint demonstrate the effectiveness of our method.     

The molecule evoluator. An interactive evolutionary algorithm for the design of drug-like molecules

We developed a software tool to design drug-like molecules, the "Molecule Evoluator", which we introduce and describe here. An atom-based evolutionary approach was used allowing both several types of mutation and crossover to occur. The novelty, we claim, is the unprecedented interactive evolution, in which the user acts as a fitness function. This brings a human being's creativity, implicit knowledge, and imagination into the design process, next to the more standard chemical rules. Proof-of-concept was demonstrated in a number of ways, both computationally and in the lab. Thus, we synthesized a number of compounds designed with the aid of the Molecule Evoluator. One of these is described here, a new chemical entity with activity on alpha-adrenergic receptors.     

Mining a chemical database for fragment co-occurrence: discovery of "chemical clichés"

Nowadays millions of different compounds are known, their structures stored in electronic databases. Analysis of these data could yield valuable insights into the laws of chemistry and the habits of chemists. We have therefore explored the public database of the National Cancer Institute (>250,000 compounds) by pattern searching. We split the molecules of this database into fragments to find out which fragments exist, how frequent they are, and whether the occurrence of one fragment in a molecule is related to the occurrence of another, nonoverlapping fragment. It turns out that some fragments and combinations of fragments are so frequent that they can be called "chemical clichés". We believe that the fragment data can give insight into the chemical space explored so far by synthesis. The lists of fragments and their (co-)occurrences can help create novel chemical compounds by (i) systematically listing the most popular and therefore most easily used substituents and ring systems for synthesizing new compounds, (ii) being an easily accessible repository for rarer fragments suitable for lead compound optimization, and (iii) pointing out some of the yet unexplored parts of chemical space.     

A theoretical basis for parameter selection and instrument design in comprehensive size-exclusion chromatography x liquid chromatography

A novel approach for the selection of the operational parameters (linear velocity, column length) for a comprehensive 2D-LC system is discussed. Starting point for the calculations is a given second dimension ((2)D) separation and a desired peak capacity for the 2D system. Using the theory developed here the optimum settings for the first dimension ((1)D) column can be derived. Theory clearly indicates that the choice of the (1)D conditions is basically limited to just one set of column lengths and linear velocities. The new method is tested on a comprehensive two-dimensional liquid chromatography system which uses size-exclusion chromatography (SEC) followed by reversed phase liquid chromatography (RPLC). A novel LC/LC interface, using a six-port valve rather than storage loops, joins the two chromatographic dimensions. From a theoretical comparison of continuous low flow and stop-flow operation the latter method was found to be an attractive mode of interfacing. The common idea that stop-flow operation results in additional band broadening is shown to be incorrect. The new interface design operated in the stop-flow mode permits the use of conventional analytical diameter HPLC columns, 7.8mm for SEC and 4.6mm for RPLC. The reversed phase chromatography utilizes a monolithic C-18 modified silica column, which produces fast and efficient analyses. As test samples complex mixtures of peptides were analyzed.     

配位聚合物[HgI_2(bpea)]_n[bpea=1,2-双(4-吡啶基)乙烷]的合成结构表征和光学折射效应(英文)

制备44连吡啶基二卤加和物MX244′bipyn仍然有较大困难。这类化合物数量不多且已报道的多为难处理的微晶材料。本文在室温下通过简单的操作合成了新的碘化汞连吡啶乙烷加和物HgI2bpean。X射线单晶衍射分析表明其中的汞原子通过与两个碘原子以及吡啶乙烷的两个氮原子配位形成扭曲的四面体构型。每个HgI2单元由bpea桥连形成锯齿状链。其非线性光学性质用8纳秒激光在532nm波长进行了研究。该化合物相对于入射光表现为一定的光学吸收和强的自聚焦效应,其三阶非线性吸收系数α2=1.1×10-11m·W-1折射系数n2=5.29×10-18m2·W-1。