PHOTOCHEMISTRY OF ALL-TRANS- AND 13-CIS-14,15-DIDEUTERIORETINAL

Abstract— All- trans - and 13- cis -14,15-dideuterioretinal were synthesized and their solution photochemistry examined. Quantum yields of trans → cis or cis → trans photoisomerization and the number and ratio of primary photoproducts, determined by high pressure liquid chromatographic analysis, are essentially identical to that of their corresponding retinal isomer. The C-14, C-15 carbon-hydrogen modes play no particularly important role in the deactivation of electronically excited linear polyenes related to retinal.     

Collision-energy-resolved Penning ionization electron spectroscopy of p-benzoquinone: study of electronic structure and anisotropic interaction with He(*)(2 (3)S) metastable atoms

Collision energy dependence of partial ionization cross sections (CEDPICS) of p-benzoquinone with He(*)(2 (3)S) metastable atoms indicates that interaction potentials between p-benzoquinone and He(*)(2 (3)S) are highly anisotropic in the studied collision energy range (100-250 meV). Attractive interactions were found around the C==O groups for in-plane and out-of-plane directions, while repulsive interactions were found around CH bonds and the benzenoid ring. Assignment of the first four ionic states of p-benzoquinone and an analogous methyl-substituted compound was examined with CEDPICS and anisotropic distributions of the corresponding two nonbonding oxygen orbitals (n(O) (+),n(O) (-)) and two pi(CC) orbitals (pi(CC) (+),pi(CC) (-)). An extra band that shows negative CEDPICS was observed at ca. 7.2 eV in Penning ionization electron spectrum.     

A new route to 2'-O-alkyl-2-thiouridine derivatives via 4-O-protection of the uracil base and hybridization properties of oligonucleotides incorporating these modified nucleoside derivatives

Oligonucleotides containing 2-thiouridine (s2U) in place of uridine form stable RNA duplexes with complementary RNAs. Particularly, this modified nucleoside has proved to recognize highly selectively adenosine, the genuine partner, without formation of a mismatched base pair with the guanosine counterpart. In this paper, we describe new methods for the synthesis of 2-thiouridine and various 2'-O-alkyl-2-thiouridine derivatives. Oligoribonucleotides having these modified nucleoside derivatives were synthesized, and their hybridization and structural properties were studied in detail by the 1H NMR analysis of these modified nucleosides and Tm experiments of RNA duplexes with their complementary RNA strands.     

THE 'OPSIN SHIFT' IN BACTERIORHODOPSIN: STUDIES WITH ARTIFICIAL BACTERIORHODOPSINS

Abstract— The difference (in cm⁻¹) in absorption maxima between the protonated Schiff base of retinals and the pigment derived therefrom has been defined as the opsin shift. It represents the influence of the opsin binding site on the chromophore. The analysis of the opsin shifts of a series of dihydrobacteriorhodopsins has led to the external point-charge model, which in addition to a counter anion near the Schiff base ammonium, carries another negative charge in the vicinity of the β-ionone ring. This is in striking contrast to the external point-charge model proposed earlier for the bovine visual pigment. The absorption maxima of rhodopsins formed from bromo- and phenyl retinals support the two models. A retinal carrying a photoaffinity label has yielded a nonbleachable bacteriorhodopsin.     

Quantitative evaluation of stress distribution in bulk polymer samples through the comparison of mechanical behaviors between giant single‐crystal and semicrystalline samples of poly(trans‐1,4‐diethyl muconate)

The Raman shift and crystallite modulus were measured under the application of tensile force for a giant single crystal and a series of uniaxially oriented semicrystalline samples of poly(trans‐1,4‐diethyl muconate) (polyEMU). The apparent Raman shift factor α^app or a vibrational frequency shift per 1 GPa tensile stress was higher for the semicrystalline samples with lower crystallinity or lower bulk modulus. The apparent crystallite modulus E or Young's modulus along the chain axis in the crystalline region was not constant but varied remarkably between the giant single crystal and semicrystalline samples. A systematic change in α^app and E among the polyEMU samples with different preparation history could be interpreted quantitatively on the basis of a mechanical series parallel model consisting of crystalline and amorphous phases. The origin of different E and α^app was speculated to be a stress concentration on the taut‐tie chain contained as a parallel crystalline component in the mechanical model. © 2003 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 41: 444–453, 2003     

Influence of the Coordination of Donor Solvent Molecules to 1,4,7,10-Tetramethyl-1,4,7,10- tetraazacyclododecanenickel(II) and Analogous Nickel(II) Complexes on Their Steric Factors

Coordination equilibrium constants (K _NiS) of some donor solvent molecules to 1,4,7,10-tetramethyl-1,4,7,10-tetraazacyclododecanenickel(II) ([Ni(Me₄[12]aneN₄)]²⁺) were determined in nitrobenzene (a noncoordinating bulk solvent). The first (K _NiS1) and second stepwise coordination equilibrium constants (K _NiS2) for 1,4,7,10-tetraazacyclododecanenickel(II) ([Ni([12]aneN₄)]²⁺), 1,4,8,11-tetraazac yclotetradecane- nickel(II) ([Ni([14] aneN₄)]²⁺), 1,4,8,11-tetrathiacyclotetra-decanenickel(II) ([Ni([14]aneS₄)]²⁺) were also reinvestigated. The K _NiS values for [Ni(Me₄[12]aneN₄)]²⁺ were compared to those of [Ni([12]aneN₄)]²⁺, (1R,4S, 8R,11S)-1,4,8,11-tetramethyl-1,4,8,11-tetraazacyclotetradecanenickel(II) (R,S,R,S-[Ni(Me₄[14]aneN₄)]²⁺), R,R,S,S-[Ni(Me₄[14]aneN₄)]²⁺, [Ni([14]aneN₄)]²⁺, and [Ni([14]aneS₄)]²⁺. Coordination of pyridine (Py), N,N,N′,N′-tetramethylurea (TMU), and N,N-dimethylacetamide (DMA) to [Ni(Me₄[12]aneN₄)]²⁺ was observed, although these donor solvent molecules did not coordinate to R,S,R,S-[Ni(Me₄[14]aneN₄)]²⁺. The K _NiS values for Py, TMU, and DMA are 7.9, 2.8, and 9.0 dm³⋅mol⁻¹, respectively. Some hydrogen-bonding waters were coordinated to R,S,R,S-[Ni(Me₄[14]aneN₄)]²⁺, but such waters did not coordinate to [Ni(Me₄[12] aneN₄)]²⁺. Also, the K _NiS2 values were larger than the corresponding K _NiS1 values for [Ni([14]aneS₄)]²⁺. Furthermore, the K _NiS1 values for [Ni([12]aneN₄)]²⁺ were the largest among these nickel(II) complex cations. The K _NiS, K _NiS1, and K _NiS2 values are discussed in terms of properties of the donor solvents and steric strains of these nickel(II) complex cations.     

Nmr spectroscopic studies on the tautomerism in tenuazonic acid analogs

Nmr spectra of structural analogs of tenuazonic acid such as 3-acetyltetramic acid, 3-acetyltetronic acid, 3-acetylthiotetronic acid and others were investigated for elucidation of the tautomeric structures. These compounds have completely enolized β,β′-triketone systems, and the position of the nmr signals for the enolic proton shows that the strength of their intramolecular hydrogen-bonding is weaker than those of acyclic β,β′-triketones and six-membered cyclic triketones. The assignment was made for nmr signals split by the difference of the diamagnetic anisotropic effect in each tautomers. The percentages of each of the tautomers were calculated from the intensities of the corresponding nmr signals. The results were confirmed by means of ¹³C-nmr spectroscopy.     

Kinetic and ESR studies on the radical polymerization of Di-n-butyl itaconate in benzene

The polymerization of di-n-butyl itaconate (DBI) intiated with AIBN was kinetically investigated in benezene. The polymerization rate (R_p) was expressed by: R_p = k[AIBN]^0.5[DBI]^1.7. The polymerization showed a considerably low overall activation energy of 15.3 kcal/mol. The initiator efficiency of AIBN in this system decreased with increasing DBI concentration, ranging from 0.34 to 0.55°C, which is ascribable to viscosity effect due to the monomer. From an ESR study, the polymerization system was found to involve two kinds of persistent radicals, namely, primary propagating ( III ) and propagating ( I ) radicals. The relative concentration of III to I increased with decreasing monomer concentration. Azo-nitrile initiators such as AVN and ACN similarly produced two persistent radicals, while MAIB, DBPO, and PBO yielded only propagating radical I as persistent. The MAIB-initiated polymerization of DBI was also performed in benzene. Similar kinetic features were observed, that is, a higher dependence of R_p on the DBI concentration and a low overall activation energy (14.4 kcal/mol). The following rate equation was obtained at 50°C:R_p = k[MAIB]^0.5[DBI]^1.6. The initiator efficiency of MAIB decreased with increasing DBI concentration, ranging from 0.32 to 0.53 at 50°C. The concentration of propagating radical I was determined by ESR at 50 and 61°C, from which k_p and k_t were estimated. The k_p value increased with increasing monomer concentration, while the k_t one decreased with the DBI concentration. These values are much lower compared with those of MMA.     

An effective cross-linking of polymer layer on monodisperse, poly(maleic anhydride-styrene)-modified colloidal silica particles and properties of the composite

Summary  The cross-linkings of the surface polymer layer on mono disperse, poly(maleic anhydride-styrene)-modified silica particles by the reaction with diisocyanate were studied. The extent of cross-linking was estimated by the weight decrease by immersing the particles in the buffer solution of pH 2.0, 4.0 and 9.0 at a room temperature for 24 h. The reaction of the polymer-modified silica with 1,6-diisocyanatohexane afforded relatively stable composite particles which lost less than 5 wt% of the polymer in aqueous solution in the pH range 2.0–9.0. The diisocyanate was a preferable cross-linker to 2,4-diisocyanatotoluene in terms of stability in acidic or basic aqueous solution. The flexibility of the cross-linker molecule possibly plays an important role in the cross-linking reaction. The carboxyl and amino groups were formed by treating the cross-linked composite particles with diluted HCl solution; 5–6 and 0.5–1.1 μmol g^-1, respectively. The cross-linked composite particles exhibited the characteristic property of ζ-potential, −44 to −47 mV and −102 to −107 mV in a neutral aqueous solution and ethanol, respectively. Received: 26 May 1997 Accepted: 4 August 1997     

Diinsertion of fluorenylidene into a sulfur-sulfur bond of diaryl disulfides

Upon irradiation (>340 nm) of a benzene solution of diazofluorene with di-p-tolyl- or di-p-anisyl disulfide, the corresponding 9,9′-bis(arylmercapto)bifluorenyl was afforded in moderate to good yield accompanied by formation of 9,9′-bis(arylmercapto)fluorene. The major reaction pathway is considered to be a disulfur ylide formation followed by two times of successive Stevens rearrangement or by concerted electron redistribution via [2,3]sigmatropic rearrangement.