Lithium ion induced stabilization of the liquid crystalline DNA

A comparative study of the effects of alkali metal ions Li(+), Na(+), K(+), Rb(+), and Cs(+) on the liquid crystalline organization of high-molecular-weight calf thymus DNA using polarized light microscopy was performed. Major differences in the behavior of Li(+) as compared to the other ions were found. Critical DNA concentration expected to exhibit anisotropic behavior was found to be the same for all the monovalent ions, except for Li(+). DNA initially showed cholesteric textures, which later changed to higher ordered columnar phase for all ions, with the cholesteric-columnar transition facilitated upon increasing the size of the counterion. For Li(+) ion, a nematic schlieren-like texture was formed initially, which after a few days changed to a highly stable (for more than 2 months) biphasic cholesteric-columnar arrangement. The observed differences between Li(+) and other alkali metal ions could be rationalized on the basis of the higher number of hydration water molecules of Li(+) and its complexation behavior. Highly stable DNA mesophases may find applications in the field of nanoelectronics, in designing biosensing units, and in DNA chips.     

Synthesis and structural details of MSr2RECu2O7+δ(M-1212;0⩽δ<1) compounds with M = Al,Nb, Fe,Ru, Ga & Co and RE = Eu,Y

Synthesis and structural details of MSr₂RECu₂O_z (M-1212) compounds with M = Ga, Nb, Fe, Al and Co) and RE = Eu, Y are reported. Reitveld refinement of X-ray diffraction (XRD) patterns shows that all compounds are crystallized in single phase. Nb-, Fe- and Al-1212 possess tetragonal P4/mmm space group structure while the Ga-1212 and Co-1212 are crystallized in orthorhombic Ima2 space group. The change of space group from P4/mmm to Ima2 indicating towards the doubling of unit cell. The buckling angle [Cu(2)–O(2)–Cu(2) angle] shows that most of the studied samples are heavily under doped and hence they could not exhibit superconductivity. Thermogravimetric (TGA) analysis shows the M-1212 compounds to be more stable than widely studied 90 K superconductor Cu-1212 (RE-123).     

Optofluidic Raman sensor for simultaneous detection of the toxicity and quality of alcoholic beverages

We report a chemometric prediction of the toxicity and quality of liquor using an optofluidic sensor based upon Waveguide Confined Raman Spectroscopy (WCRS). The WCRS sensor was used to record the Raman spectra, each obtained from a 20 µl sample of a given alcoholic beverage with and acquisition time of 20 s. This was used to predict, simultaneously, both the methanol concentration (toxicity) and ethanol concentration (quality), with an accuracy of 0.1% and 0.7% by volume, respectively, using a Partial Least Squares‐based chemometric model. The model sensor is shown to be capable of identifying toxic liquors, based on the test performed on different types of liquor samples. Copyright © 2013 John Wiley & Sons, Ltd.     

Spectral characterization, cyclic voltammetry, morphology, biological activities and DNA cleaving studies of amino acid Schiff base metal(II) complexes

Metal complexes are synthesized with Schiff bases derived from o-phthalaldehyde (opa) and amino acids viz., glycine (gly) l-alanine (ala), l-phenylalanine (pal). Metal ions coordinate in a tetradentate or hexadentate manner with these N(2)O(2) donor ligands, which are characterized by elemental analysis, molar conductance, magnetic moments, IR, electronic, (1)H NMR and EPR spectral studies. The elemental analysis suggests the stoichiometry to be 1:1 (metal:ligand). Based on EPR studies, spin-Hamiltonian and bonding parameters have been calculated. The g-values calculated for copper complexes at 300K and in frozen DMSO (77K) indicate the presence of the unpaired electron in the dx2-y2 orbital. The evaluated metal-ligand bonding parameters showed strong in-plane sigma- and pi-bonding. X-ray diffraction (XRD) and scanning electron micrography (SEM) analysis provide the crystalline nature and the morphology of the metal complexes. The cyclic voltammograms of the Cu(II)/Mn(II)/VO(II) complexes investigated in DMSO solution exhibit metal centered electroactivity in the potential range -1.5 to +1.5V. The electrochemical data obtained for Cu(II) complexes explains the change of structural arrangement of the ligand around Cu(II) ions. The biological activity of the complexes has been tested on eight bacteria and three fungi. Cu(II) and Ni(II) complexes show an increased activity in comparison to the controls. The metal complexes of opapal Schiff base were evaluated for their DNA cleaving activities with calf-thymus DNA (CT DNA) under aerobic conditions. Cu(II) and VO(II) complexes show more pronounced activity in presence of the oxidant.     

Rapid and simple liquid chromatography tandem mass spectrometry method for the quantification of zidovudine in rat plasma

A high-performance liquid chromatography/electrospray ionization tandem mass spectrometry method was developed and validated for the quantification of zidovudine in rat plasma. Following solid-phase extraction, the analytes were separated using an isocratic mobile phase on a reverse phase column and analyzed by MS/MS in the multiple reaction monitoring mode using the respective [M+H]+ ions, m/z 268/127 for zidovudine and m/z 230/112 for the internal standard. The method exhibited a linear dynamic range of 5-500 ng/mL for zidovudine in rat plasma. The lower limit of quantification was 5 ng/mL with a relative standard deviation of less than 8%. Acceptable precision and accuracy were obtained for concentrations over the standard curve range. A run time of 1.5 min for each sample made it possible to analyze more than 400 plasma samples per day. The validated method was applied for pharmacokinetic studies of the novel drug delivery systems of zidovudine in rats.     

Divalent cation-induced variations in polyelectrolyte conformation and controlling calcite morphologies: direct observation of the phase transition by atomic force microscopy

In the biomineralization process, the changes in conformation of organic matrix may be a widespread phenomenon. Investigation of the structural relationship between organic and inorganic materials is the main subject. The approach taken was to extract quantitative information of the variations in polyelectrolyte conformation during the mineralization process using atomic force microscopy. The results infer the evidence of the role of polyelectrolyte conformation in mineralization of calcium carbonate and the methods for understanding the principle that govern biomineralization.     

Chemical synthesis,characterization and evaluation of antimicrobial properties of Cu and its oxide nanoparticles

Cu nanoparticles were synthesized using low-temperature aqueous reduction method at pH 3, 5, 7, 9 and 11 in presence of ascorbic acid and polyvinylpyrrolidone. The nanoparticles were characterized using transmission electron microscopy, scanning electron microscopy, energy-dispersive X-ray spectroscopy, and X-ray diffraction techniques. Results demonstrated a strong dependence of synthesis pH on the size, shape, chemical composition and structure of Cu nanoparticles. While lower pH conditions of 3 and 5 produced Cu⁰, higher pH levels (more than 7) led to the formation of Cu₂O/CuO nanoparticles. The reducing capacity of ascorbic acid, capping efficiency of PVP and the resulting particle sizes were strongly affected by solution pH. The results of in vitro disk diffusion tests showed excellent antimicrobial activity of Cu₂O/CuO nanoparticles against a mixture of bacterial strains (Staphylococcus aureus, Escherichia coli and Pseudomonas aeruginosa), indicating that the size as well as oxidation state of Cu contributes to the antibacterial efficacy. The results indicate that varying synthesis pH is a strategy to tailor the composition, structure and properties of Cu nanoparticles.     

Model systems for probing metal cation hydration: the V+(H2O) and ArV+(H2O) complexes

In support of mass-selected infrared photodissociation (IRPD) spectroscopy experiments, coupled-cluster methods including all single and double excitations (CCSD) and a perturbative contribution from connected triple excitations [CCSD(T)] have been used to study the V+(H2O) and ArV+(H2O) complexes. Equilibrium geometries, harmonic vibrational frequencies, and dissociation energies were computed for the four lowest-lying quintet states (5A1, 5A2, 5B1, and 5B2), all of which appear within a 6 kcal mol(-1) energy range. Moreover, anharmonic vibrational analyses with complete quartic force fields were executed for the 5A1 states of V+(H2O) and ArV+(H2O). Two different basis sets were used: a Wachters+f V[8s6p4d1f] basis with triple-zeta plus polarization (TZP) for O, H, and Ar; and an Ahlrichs QZVPP V[11s6p5d3f2g] and Ar[9s6p4d2f1g] basis with aug-cc-pVQZ for O and H. The ground state is predicted to be 5A1 for V+(H2O), but argon tagging changes the lowest-lying state to 5B1 for ArV+(H2O). Our computations show an opening of 2 degrees -3 degrees in the equilibrium bond angle of H2O due to its interaction with the metal ion. Zero-point vibrational averaging increases the effective bond angle further by 2.0 degrees -2.5 degrees, mostly because of off-axis motion of the heavy vanadium atom rather than changes in the water bending potential. The total theoretical shift in the bond angle of about +4 degrees is significantly less than the widening near 9 degrees deduced from IRPD experiments. The binding energies (D0) for the successive addition of H2O and Ar to the vanadium cation are 36.2 and 9.4 kcal mol(-1), respectively.     

Copolyesters of hydroxyphenylalkanoic acids: Synthesis,properties, and in vitro degradation of poly(4‐oxybenzoate‐co‐4‐oxyphenylacetate)

Hydrolytically degradable copolyesters of the naturally occurring monomer 4‐hydroxyphenylacetic acid (HPAA) with 4‐hydroxybenzoic acid (HBA) were synthesized for the first time by the acidolysis melt polymerization of their acetoxy derivatives. The HPAA/HBA copolyesters prepared by acidolysis melt polycondensation had higher yields and molecular weights than those obtained by a one‐pot method. The high‐temperature solvent Dowtherm® improved the color of the polyester. Although catalysts did not affect the inherent viscosity and yield of the polymer, they did reduce the polymerization time. A higher degree of polymerization was achieved with postpolymerization and annealing techniques. Copolyesters prepared in different molar ratios were analyzed by elemental analysis, IR, NMR, and inherent viscosity and were further characterized for their thermal and phase properties by thermogravimetric analysis, differential scanning calorimetry, wide‐angle X‐ray diffraction, and polarized light microscopy. The composition of the copolyesters affected the yield, solubility, and inherent viscosity. The NMR data indicated comparatively high randomization for the copolyester obtained by acidolysis melt polymerization. The 60/40 HPAA/HBA copolyester formed a birefringent melt with a grainy texture above 175 °C with isotropization at 297 °C and thermal stability above 350 °C. The occurrence of birefringence with a grainy texture in the melt indicates a layered smectic phase; this was supported by wide‐angle X‐ray diffraction powder patterns. The in vitro hydrolytic degradability of the copolyester was studied by the measurement of the water absorption of the film samples in buffer solutions of pH 7 and 10 at 30 and 60 °C. The copolyester showed considerable hydrolytic degradation, enough to be called biodegradable, compared with the commercial polyester Vectra®, thereby demonstrating prospects for syntheses of copolyesters with tailor‐made degradability. The degradation of the copolyester was identified by Fourier transform infrared, differential scanning calorimetry, thermogravimetric analysis, and scanning electron microscopy. These polyesters with controlled crystallinity and degradability should be considered for possible applications in biomedical areas (e.g., bone fixation devices in fracture treatment) in which high strength with biodegradability is an essential requirement. © 2001 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 39: 693–705, 2001