Photokinetic,Biochemical and Structural Features of Chimeric Photoactive Yellow Protein Constructs

Of the 10 photoactive yellow protein (PYPs) that have been characterized, the two from Rhodobacter species are the only ones that have an additional intermediate spectral form in the resting state (λ_max = 375 nm), compared to the prototypical Halorhodospira halophila PYP. We have constructed three chimeric PYP proteins by replacing the first 21 residues from the N‐terminus (Hyb1PYP), 10 from the β4–β5 loop (Hyb2PYP) and both (Hyb3PYP) in Hhal PYP with those from Rb. capsulatus PYP. The N‐terminal chimera behaves both spectrally and kinetically like Hhal PYP, indicating that the Rcaps N‐terminus folds against the core of Hhal PYP. A small fraction shows dimerization and slower recovery, possibly due to interaction at the N‐termini. The loop chimera has a small amount of the intermediate spectral form and a photocycle that is 20 000 times slower than Hhal PYP. The third chimera, with both regions exchanged, resembles Rcaps PYP with a significant amount of intermediate spectral form (λ_max = 380 nm), but has even slower kinetics. The effects are not strictly additive in the double chimera, suggesting that what perturbs one site, affects the other as well. These chimeras suggest that the intermediate spectral form has its origins in overall protein stability and solvent exposure.     

Amidrazones 9. Convenient Syntheses of 1-Alkyl-1-Phenylhydrazines and α,β-Unsaturated Amidrazones Via Base-Promoted Reactions of 1,1-Disubstituted-3-Amino-4,5-Dihydro-1H-Pyrazolium Salts

A simple, efficient procedure for the conversion of phenylhydrazine to 1-alkyl-1-phenylhydrazines via base-promoted hydrolysis of 1-alkyl-3-amino-4,5-dihydro-1-phenyl-1H-pyrazolium iodides (2) is described. N¹, N¹-disubstituted hydrazones of trans-cinnamamide and acrylamide are obtained by Hofmann-type ring openings of 1,1 -disubstituted-3-amino-4,5-dihydro-5-phenyl (or 5-unsubstituted) -1H-pyrazolium halides (5, 7).     

Photophysics of monodisperse platinum-acetylide oligomers: delocalization in the singlet and triplet excited states

A series of monodisperse Pt-acetylide polymers that contain the [-CC-(p-C6H4)-CC-(t-Pt(PBu3)2)-]n repeat unit has been prepared for n = 1, 2, 3, 4, 5, and 7. The photophysical properties of the series provide information concerning the relationship between the oligomer length and delocalization in the singlet and triplet excited states of the pi-conjugated electron system. The results imply that the singlet excited state is delocalized over approximately 6 repeat units; however, the triplet state is considerably more localized. The triplet energy is almost invariant with oligomer length, but the phosphorescence spectra and triplet nonradiative decay rates indicate that the electron-vibrational coupling in the triplet state decreases with increasing oligomer length.     

Characterization of VX on concrete using ion trap secondary ionization mass spectrometry

The nerve agent VX (O-ethyl S-2-diisopropylaminoethyl methyl phosphonothiolate) was analyzed on the surface of concrete samples using an ion trap secondary ion mass spectrometer (IT-SIMS). It was found that VX could be detected down to an absolute quantity of 5 ng on a concrete chip, or to a surface coverage of 0.0004 monolayers on crushed concrete. To achieve these levels of detection, the m/z 268-->128 ion fragmentation was measured using MS2, where m/z 268 corresponds to [VX + H]+, and 128 corresponds to a diisopropylvinylammonium isomer, that is formed by the elimination of the phosphonothiolate moiety. Detection at these levels was accomplished by analyzing samples that had been recently exposed to VX, i.e., within an hour. When the VX-exposed concrete samples were aged, the SIMS signature for intact VX had disappeared, which signaled the degradation of the compound on the concrete surface. The VX signature was replaced by ions which are interpreted in terms of VX degradation products, which appear to be somewhat long lived on the concrete surface. These compounds include ethylmethylphosphonic acid (EMPA), diisopropyl taurine (DIPT), diisopropylaminoethanethiol (DESH), bis(diisopropylaminoethane) disulfide [(DES)2], and a particularly tenacious compound that may correspond to diisopropylvinylamine (DIVA), or an isomer thereof. It was found that the thiolamine-derived degradation products DIPT, DESH, and (DES)2 were removed with isopropyl alcohol extraction. However, the DIVA-related degradation product was observed to strongly adhere to the concrete surface for longer than one week. Although quantitation was not possible in this set of experiments, the results clearly show the rapid degradation of VX on concrete, as well as the surface sensitivity of the IT-SIMS for intact VX and its adsorptive degradation products.     

ITQ-12: a new microporous silica polymorph potentially useful for light hydrocarbon separations

The new synthetic form of microporous crystalline silica, denoted as ITQ-12, shows a high potential for the separation of propane and propene from its mixtures.     

A new class of oxo-bridged high-valent hexamanganese clusters supported by sterically hindered carboxylate ligands

A new class of oxo-bridged high-valent hexamanganese (Mn6) clusters containing a novel (Mn6O8)6+ core, [MnIV(4)MnIII2(mu-O)4(mu3-O)4(dmb)6(O2CR)2]4+ (where dmb=4,4'-dimethyl-2,2'-bipyridine, and RCO2=2,6-di(p-tolyl)benzoate (Ar(Tol)CO2-) (3) or 2,6-di(4-tert-butylphenyl)benzoate (Ar(4-tBuPh)CO2-) (4)), was synthesized using sterically hindered m-terphenyl-derived carboxylate ligands. These complexes can be synthesized by oxidizing the MnII mononuclear complexes, [Mn(dmb)2(OH2)(O2CR)]+ (where RCO2=Ar(Tol)CO2- (1) or Ar(4-tBuPh)CO2- (2)) with (n-Bu4N)MnO4, by direct Mn(II) + Mn(VII) in situ comproportionation reactions, or by ligand substitution on the dinuclear manganese (III,IV) or (IV,IV) complexes, [(Mn2(mu-O)2(dmb)4)](3+/4+). The compound [MnIV4MnIII2(mu-O)4(mu3-O)4(dmb)6(Ar(Tol)CO2)2](OTf)4 [3(OTf)4] crystallizes in the monoclinic space group P2(1)/n, with the cell parameters a=15.447(1) A, b=15.077(2) A, c=27.703(2) A, beta=91.68(2) degrees, V=6449.3(6) A3, and Z=2. The X-ray structure reveals that there are three different bridging modes for the oxo groups: mu, "pyramidal" mu3, and "T-shaped" mu3. Solid-state variable temperature magnetic susceptibility studies suggest that the Mn centers are net antiferromagnetically coupled to yield a diamagnetic ST=0 ground spin state with a large number of low-lying, thermally accessible states with ST>0. 1H NMR spectra were recorded for both Mn6 clusters and selected resonances assigned. The electronic and redox properties of these complexes along with the effect of the presence of the bulky carboxylate ligands are also described here.     

A novel algorithm for chromatogram matching in qualitative analysis

The matching of the pattern of peaks produced during gas chromatography is of importance to many applications. At present, this task is generally performed manually, but this generates the usual problems associated with human inspection, such as a lack of objectivity and reproducibility, proneness to errors, and practical restriction of the volume of data which can reasonably be processed. This paper explores the use of a novel algorithm for automation of this task. The performance of the method on well controlled simulated data sets and real chromatograms is used to show not only how problems of manual inspection can be circumvented, but also how the existence of such a powerful method should open up the possibility of many new analyses for quality control, discrimination of varieties of sample, and the identification of specific components within a sample.     

Temperature dependence of europium carbonate complexation

The temperature dependencies of europium carbonate stability constants were examined at 15, 25, and 35°C in 0.68 molal Na⁺(ClO ₄ ^? , HCO ₃ ^? ) using a tributyl phosphate solvent extration technique. Our distribution data can be explained by the equilibria $$\begin{gathered} Eu^{3 + } + H_2 O + CO_2 (g)_ \leftarrow ^ \to EuCO_3^ + + 2H^ + \hfill \\ - log\beta _{12} = 9.607 + 496(t + 273.16)^{ - 1} \hfill \\ Eu^{3 + } + 2H_2 O + 2CO_2 (g)_ \leftarrow ^ \to Eu(CO_3 )_2^ - + 4H^ + \hfill \\ - log\beta _{24} = 21.951 + 670(t + 273.16)^{ - 1} \hfill \\ Eu^{3 + } + H_2 O + CO_2 (g)_ \leftarrow ^ \to EuHCO_3^{2 + } + H^ + \hfill \\ - log\beta _{11} = 1.688 + 1397(t + 273.16)^{ - 1} \hfill \\ \end{gathered}$$      

Novel tricyclic diamines 2. Synthesis of 1,7-diazaisoadamantane, 1,5-diazaisoadamantane and 1,6-diazahomobrendane

Three novel tricyclic diamines (1,7-diazaisoadamantane, 1,5-diazaisoadamantane and 1,6-diazahomobrendane) were prepared. A flexible synthetic strategy was employed which used flat, aromatic azaindoles as the starting materials. The requisite azaindoles were prepared by a tandem Sonogashira coupling/intramolecular cyclization reaction. Ring saturation, appropriate functionalization and intramolecular alkylation provided the three novel tricyclic diamines cores.