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41.
Saitô H Kawase Y Kira A Yamamoto K Tanio M Yamaguchi S Tuzi S Naito A 《Photochemistry and photobiology》2007,83(2):253-262
The 3D structure of bacteriorhodopsin (bR) obtained by X-ray diffraction or cryo-electron microscope studies is not always sufficient for a picture at ambient temperature where dynamic behavior is exhibited. For this reason, a site-directed solid-state 13C NMR study of fully hydrated bR from purple membrane (PM), or a distorted or disrupted lattice, is very valuable in order to gain insight into the dynamic picture. This includes the surface structure, at the physiologically important ambient temperature. Almost all of the 13C NMR signals are available from [3-13C]Ala or [1-13C]Val-labeled bR from PM, although the 13C NMR signals from the surface areas, including loops and transmembrane alpha-helices near the surface (8.7 angstroms depth), are suppressed for preparations labeled with [1-13C]Gly, Ala, Leu, Phe, Tyr, etc. due to a failure of the attempted peak-narrowing by making use of the interfered frequency of the frequency of fluctuation motions with the frequency of magic angle spinning. In particular, the C-terminal residues, 226-235, are present as the C-terminal alpha-helix which is held together with the nearby loops to form a surface complex, although the remaining C-terminal residues undergo isotropic motion even in a 2D crystalline lattice (PM) under physiological conditions. Surprisingly, the 13C NMR signals could be further suppressed even from [3-13C]Ala- or [1-13C]Val-bR, due to the acquired fluctuation motions with correlation times in the order of 10(-4) to 10(-5) s, when the 2D lattice structure is instantaneously distorted or completely disrupted, either in photo-intermediate, removed retinal or when embedded in the lipid bilayers. 相似文献
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Depending on the synthetic conditions, five heterometallic Mn(III)Fe(II) polynuclear compounds with the same ratio of constituents, 2[Mn(acacen)](+)/[Fe(CN)(5)NO](2-), of different nuclearity and dimensionality (0D, 1D, 2D) were isolated. A [Mn(acacen)MeOH](2)[Fe(CN)(5)NO]·1.5MeOH, 1 complex has been prepared by reaction of Mn(III)/Schiff base (SB) complex, [Mn(acacen)Cl] (H(2)acacen is N,N'-ethylenebis(acetylacetoneimine)) with sodium nitroprusside (NP). Single crystal X-ray diffraction analyses reveal that crystallization of 1 from coordinating or non-coordinating solvents results in different coordination polynuclear materials: from C(2)H(5)OH [{Mn(acacen)H(2)O}(2)Fe(CN)(5)NO]·C(2)H(5)OH, 2, a trinuclear complex is formed; from CH(3)CN [{Mn(acacen)H(2)O}(4)Fe(CN)(5)NO][Fe(CN)(5)NO]·4CH(3)CN, an ionic compound with a pentanuclear bimetallic cation is formed 3; from i-C(3)H(7)OH [{Mn(acacen)}(2)(i-PrOH)Fe(CN)(5)NO](n), a coordination chain polymer 4 is formed; from toluene [{Mn(acacen)}(2)Fe(CN)(5)NO](n), a layered network 5 is formed. As the magnetic measurements show, for all compounds the weak interaction between Mn(III)S = 2 spins through the NP bridge is antiferromagnetic and exhibits no significant photoactivity. 相似文献
45.
Kira M 《Proceedings of the Japan Academy. Series B, Physical and biological sciences》2012,88(5):167-191
Structure and properties of silicon-silicon doubly bonded compounds (disilenes) are shown to be remarkably different from those of alkenes. X-Ray structural analysis of a series of acyclic tetrakis(trialkylsilyl)disilenes has shown that the geometry of these disilenes is quite flexible, and planar, twist or trans-bent depending on the bulkiness and shape of the trialkylsilyl substituents. Thermal and photochemical interconversion between a cyclotetrasilene and the corresponding bicyclo[1.1.0]tetrasilane occurs via either 1,2-silyl migration or a concerted electrocyclic reaction depending on the ring substituents without intermediacy of the corresponding tetrasila-1,3-diene. Theoretical and spectroscopic studies of a stable spiropentasiladiene have revealed a unique feature of the spiroconjugation in this system. Starting with a stable dialkylsilylene, a number of elaborated disilenes including trisilaallene and its germanium congeners are synthesized. Unlike carbon allenes, the trisilaallene has remarkably bent and fluxional geometry, suggesting the importance of the π-σ* orbital mixing. 14-Electron three-coordinate disilene-palladium complexes are found to have much stronger π-complex character than related 16-electron tetracoordinate complexes. 相似文献
46.
Masae Takahashi Mitsuo Kira Kenkichi Sakamoto Thomas Müller Yitzhak Apeloig 《Journal of computational chemistry》2001,22(13):1536-1541
Vertical electronic transition energies of diaminosilylenes and their dimers (disilenes and nitrogen‐bridged) were investigated by ab initio and density functional calculations. A good linear correlation was found between the observed UV transition energies of various silylenes and disilenes and those of model compounds calculated using the CIS and TD–DFT methods. On the basis of these computations the experimental UV absorption maximum observed for the dimer of (i‐Pr2N)2Si: (λmax 439 nm at 77 K), could be assigned to an Si? Si bonded dimer with an unusually long Si? Si distance of 2.472 Å, and the isomeric amino‐bridged cyclic dimer could be discarded. © 2001 John Wiley & Sons, Inc. J Comput Chem 22: 1536–1541, 2001 相似文献
47.
Discrete Ti−O−Ti Complexes: Visible-Light-Activated,Homogeneous Alternative to TiO2 Photosensitisers
Kira Behm Dr. Eszter Fazekas Prof. Martin J. Paterson Dr. Filipe Vilela Dr. Ruaraidh D. McIntosh 《Chemistry (Weinheim an der Bergstrasse, Germany)》2020,26(43):9486-9494
A series of novel bimetallic TiIV amine bis(phenolate) complexes was synthesised and fully characterised. X-ray crystallography studies revealed distorted octahedral geometries around the Ti centres with single or double oxo-bridges connecting the two metals. These robust, air- and moisture-stable complexes were employed as photosensitisers generating singlet oxygen following irradiation with visible light (420 nm) LED module in a commercial flow reactor. All five complexes showed high activity in the photo-oxygenation of α-terpinene and achieved complete conversion to ascaridole in four hours at ambient temperature. The excellent selectivity of these photosensitisers towards ascaridole (vs. transformation to p-cymene) was demonstrated with control experiments using a traditional TiO2 catalyst. Further comparative studies employing the free pro-ligands as well as a monometallic analogue highlighted the importance of the ‘TiO2-like’ moiety in the polymetallic catalysts. Computational studies were used to determine the nature of the ligand to metal charge transfer (LMCT) states and singlet–triplet gaps for each complex, the calculated trends in the UV-vis absorption spectra across the series agreed well with the experimental results. 相似文献
48.
Ishikawa H Sugiyama M Baba I Setaka W Kira M Mikami N 《The journal of physical chemistry. A》2005,109(40):8959-8961
An equilibrium structure of the charge-transfer (CT) state of (p-cyanophenyl)pentamethyldisilane was determined by transient infrared absorption spectroscopy of its CH stretching vibration region, and by the spectral simulation with quantum chemical calculations. It was found that a pattern of the CH stretching vibration bands of the CT state is substantially different from that of the S0 state. This band feature of the CT state was well reproduced assuming the planar sigma(Si-Si)pi* state, where the disilanyl group and the phenyl ring lie in the same plane. Considering that the disilanyl group in the S0 and the locally excited pipi* states lie in the plane perpendicular to the phenyl ring, an occurrence of a twisting-type structural change during the ICT process was experimentally identified in the present study. 相似文献
49.
An intriguing energy-transfer experiment was recently carried out in methanol/carbon tetrachloride solutions. It turned out to be possible to watch vibrational energy accumulating in three of carbon tetrachloride's modes following initial excitation of O-H and C-H stretches in methanol, in effect making those CCl(4) modes "molecular thermometers" reporting on methanol's relaxation. In this paper, we use the example of a CCl(4) molecule dissolved in liquid argon to examine, on a microscopic level, just how this kind of thermal activation occurs in liquid solutions. The fact that even the lowest CCl(4) mode has a relatively high frequency compared to the intermolecular vibrational band of the solvent means that the only solute-solvent dynamics relevant to the vibrational energy transfer will be extraordinarily local, so much so that it is only the force between the instantaneously most prominent Cl and solvent atoms that will significantly contribute to the vibrational friction. We use this observation, within the context of a classical instantaneous-pair Landau-Teller calculation, to show that energy flows into CCl(4) primarily via one component of the nominally degenerate, lowest frequency, E mode and does so fast enough to make CCl(4) an excellent choice for monitoring methanol relaxation. Remarkably, within this theory, the different symmetries and appearances of the different CCl(4) modes have little bearing on how well they take up energy from their surroundings--it is only how high their vibrational frequencies are relative to the solvent intermolecular vibrational band edge that substantially favors one mode over another. 相似文献
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