Identification and stereochemical assignment of the beta-hydroxytryptophan intermediate in the echinomycin biosynthetic pathway

[reaction: see text] Little is known about how quinoxaline-2-carboxylic acid (QC) is synthesized in nature. On the basis of analysis of echinomycin biosynthetic gene clusters as well as feeding experiments with labeled precursors, we have proposed a biosynthetic pathway to QC and identified the (2S,3S)-beta-hydroxytryptophan as a key intermediate.     

Ostwald ripening in nanoalloys: when thermodynamics drives a size-dependent particle composition

Ostwald ripening has been broadly studied because it plays a determinant role in the evolution of cluster size during both chemical and physical synthesis of nanoparticles. This thermoactivated process causes large particles to grow, drawing material from the smaller particles, which shrink. However, this phenomenon becomes more complex when considering the coarsening of metallic alloy clusters. The present experimental and theoretical investigations show that the relative composition of CoPt nanoparticles can be strongly modified during high temperature annealing and displays a size-dependent behavior. This compositional change originates from the higher evaporation rate of Co atoms from the nanoparticles. More importantly, this effect is expected in all alloy clusters containing species with different mobilities.     

Wave propagation along a non-principal direction in a compressible pre-stressed elastic layer

The dispersive behavior of small amplitude waves propagating along a non-principal direction in a pre-stressed, compressible elastic layer is considered. One of the principal axes of stretch is normal to the elastic layer and the direction of propagation makes an angle θ with one of the in-plane principal axes. The dispersion relations which relate wave speed and wavenumber are obtained for both symmetric and anti-symmetric motions by formulating the incremental boundary value problem for a general strain energy function. The behavior of the dispersion curves for symmetric waves is for the most part similar to that of the anti-symmetric waves at the low and high wavenumber limits. At the low wavenumber limit, depending on the pre-stress and propagation angle, it may be possible for both the fundamental mode and the next lowest mode to have finite phase speeds, while other higher modes have an infinite phase speed. At the high wavenumber limit, the phase speeds of the fundamental mode and the higher modes tend to the Rayleigh surface wave speed and the limiting wave speeds of the layer, respectively. Numerical results are presented for a Blatz–Ko material and the effect of the propagation angle is clearly illustrated.     

Photochemical reaction of silyl-substituted 1,4-disila(dewar-benzene) with isocyanide and phenylacetylene

The irradiation of silyl-substituted 1,4-disila(Dewar-benzene) 1 with light of wavelength λ > 320 nm in the presence of 2,6-dimethylphenyl-isocyanide or phenylacetylene produced 1,4-bis(di-tert-butylmethylsilyl)-2,3,5,6-tetraethyl-7-(2,6-dime-thylphenylimino)-1,4-disilabicyclo[2.2.1]hepta-2,5-diene 5 or 1,4-bis(di-tert-butylmethylsilyl)-2,3,5,6-tetraethyl-1-(2-phenylethynyl)-1,4-disilacyclohexa-2,5-diene 6 , respectively. The molecular structures of 5 and 6 were determined by spectroscopic data and X-ray crystallography. © 2008 Wiley Periodicals, Inc. Heteroatom Chem 19:87–92, 2008; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20411     

Biosynthesis of Indole Diterpene Lolitrems: Radical-Induced Cyclization of an Epoxyalcohol Affording a Characteristic Lolitremane Skeleton

Lolitrems are tremorgenic indole diterpenes that exhibit a unique 5/6 bicyclic system of the indole moiety. Although genetic analysis has indicated that the prenyltransferase LtmE and the cytochrome P450 LtmJ are involved in the construction of this unique structure, the detailed mechanism remains to be elucidated. Herein, we report the reconstitution of the biosynthetic pathway for lolitrems employing a recently established genome-editing technique for the expression host Aspergillus oryzae. Heterologous expression and bioconversion of the various intermediates revealed that LtmJ catalyzes multistep oxidation to furnish the lolitrem core. We also isolated the key reaction intermediate with an epoxyalcohol moiety. This observation allowed us to establish the mechanism of radical-induced cyclization, which was firmly supported by density functional theory calculations and a model experiment with a synthetic analogue.     

Sequential stir bar sorptive extraction for uniform enrichment of trace amounts of organic pollutants in water samples

A novel extraction procedure for stir bar sorptive extraction (SBSE) termed sequential SBSE was developed. Compared to conventional SBSE, sequential SBSE provides more uniform enrichment over the entire polarity/volatility range for organic pollutants at ultra-trace levels in water. Sequential SBSE consists of a SBSE performed sequentially on a 5-mL sample first without modifier using one stir bar, then on the same sample after addition of 30% NaCl using a second stir bar. The first extraction with unmodified sample is mainly targeting solutes with high Kow (logKow>4.0), the second extraction with modified sample solution (containing 30% NaCl) is targeting solutes with low and medium Kow (logKow<4.0). After extraction the two stir bars are placed in a single glass desorption liner and are simultaneously desorbed. The desorbed compounds were analyzed by thermal desorption and gas chromatography-mass spectrometry (TD-GC-MS). Recovery of model compounds consisting of 80 pesticides (organochlorine, carbamate, organophosphorus, pyrethroid, and others) for sequential SBSE was evaluated as a function of logKow (1.70-8.35). The recovery using sequential SBSE was compared with those of conventional SBSE with or without salt addition (30% NaCl). The sequential approach provided very good recovery in the range of 82-113% for most of the solutes, and recovery less than 80% for only five solutes with low Kow (logKow<2.5), while conventional approaches (with or without salt addition) showed less than 80% recovery for 23 and 41 solutes, respectively. The method showed good linearity (r2>0.9900) and high sensitivity (limit of detection: <10ngL(-1)) for most of the model compounds even with the scan mode in the MS. The method was successfully applied to screening of pesticides at ngL(-1) level in river water samples.     

Total Biosynthesis of Melleolides from Basidiomycota Fungi: Mechanistic Analysis of the Multifunctional GMC Oxidase Mld7

Mushroom terpenoids are biologically and chemically diverse fungal metabolites. Among them, melleolides are representative sesquiterpenoids with a characteristic protoilludane skeleton. In this study, we applied a recently established hot spot knock-in method to elucidate the biosynthetic pathway leading to 1α-hydroxymelleolide. The biosynthesis of the sesquiterpene core involves the cytochrome P450 catalyzing stepwise hydroxylation of the Δ⁶-protoilludene framework and a stereochemical inversion process at the C5 position catalyzed by short-chain dehydrogenase/reductase family proteins. The highlight of the biosynthesis is that the flavoprotein Mld7 catalyzes an oxidation-triggered double-bond shift accompanying dehydration and acyl-group-assisted substitution with two different nucleophiles at the C6 position to afford the Δ⁷-protoilludene derivatives, such as melleolide and armillarivin. The complex reaction mechanism was proposed by DFT calculations. Of particular importance is that product distribution is regulated by interaction with the cell membrane.     

Enhancement of nonlinear optical response of exciton–polaritons by controlling thickness of GaAs layer

We demonstrate a remarkable thickness dependence of nonlinear optical response of exciton–polaritons in GaAs thin films by degenerate four-wave mixing (DFWM) at low temperature (T=5 K). High-quality samples of layer thickness from 80 to 200 nm were grown by molecular beam epitaxy. Confined mode of the exciton–polariton dominantly contributed to the reflection spectra, which were examined by the calculation using a transfer matrix method. The DFWM intensity at exciton resonance was enhanced at a particular thickness (110 nm). This thickness dependence is in good agreement with the nonlocal theory, which shows a remarkable size dependence of the internal field relevant to the confined mode of the exciton–polaritons.