Acidic‐pH‐Activatable Fluorescence Probes for Visualizing Exocytosis Dynamics

Live imaging of exocytosis dynamics is crucial for a precise spatiotemporal understanding of secretion phenomena, but current approaches have serious limitations. We designed and synthesized small‐molecular fluorescent probes that were chemically optimized for sensing acidic intravesicular pH values, and established that they can be used to sensitively and reliably visualize vesicular dynamics following stimulation. This straightforward technique for the visualization of exocytosis as well as endocytosis/reacidification processes with high spatiotemporal precision is expected to be a powerful tool for investigating dynamic cellular phenomena involving changes in the pH value.     

Autonomous DNA computing machine based on photochemical gate transition

We report the construction of a one-pot autonomous DNA computing machine based on photochemical gate transition (photocleavage, hybridization, and photoligation), and we performed binary digit additions using this machine. In our method, both photochemical DNA manipulations previously reported, photoligation via 5-carboxyvinyldeoxyuridene (cvU) containing ODN and photocleavage via carbazole-modified ODN, were employed. The binary digit additions were autonomously carried out by one-time irradiation at 366 nm in the single test tube. The fluorescence readout by the DNA chip was in good agreement with the correct answer of binary digit additions. We believe that this system is easily applicable to correlation analysis between SNPs as well as other binary digit processing, such as subtraction.     

Real‐time reaction monitoring by probe electrospray ionization mass spectrometry

Probe electrospray ionization (PESI) is a modified version of the electrospray ionization (ESI), where the capillary for sampling and spraying is replaced by a solid needle. High tolerance to salts and direct ambient sampling are major advantages of PESI compared with conventional ESI. In this study, PESI‐MS was used to monitor some biological and chemical reactions in real‐time, such as acid‐induced protein denaturation, hydrogen/deuterium exchange (HDX) of peptides, and Schiff base formation. By using PESI‐MS, time‐resolved mass spectra and ion chromatograms can be obtained reproducibly. Real‐time PESI‐MS monitoring can give direct and detailed information on each chemical species taking part in reactions, and this is valuable for a better understanding of the whole reaction process and for the optimization of reaction parameters. PESI‐MS can be considered as a potential tool for real‐time reaction monitoring due to its simplicity in instrumental setup, direct sampling with minimum sample preparation and low sample consumption. Copyright © 2010 John Wiley & Sons, Ltd.     

Synthesis and characterization of proton‐conducting copolyimides bearing pendant sulfonic acid groups

A series of sulfonated copolyimides (co‐SPIs) bearing pendant sulfonic acid groups were synthesized from 1,4,5,8‐naphthalenetetracarboxylic dianhydride (NTDA), bis(3‐sulfopropoxy) benzidines (BSPBs), and common nonsulfonated diamines via statistical or sequenced polycondensation reactions. Membranes were prepared by casting their m‐cresol solutions. The co‐SPI membrane had a microphase‐separated structure composed of hydrophilic and hydrophobic domains, but the connecting behavior of hydrophilic domains was different from that of the homo‐SPIs. The co‐SPI membranes displayed clear anisotropic membrane swelling in water with negligibly small dimensional changes in the plane direction of the membrane. With water uptake values of 39–94 wt %, they showed dimensional changes in membrane thickness of about 0.11–0.58, which were much lower than those of homo‐SPIs. The proton conductivity σ values of co‐SPI membranes with ion exchange capacity values ranging from 1.95–2.32 meq/g increased sigmoidally with increasing relative humidity. They displayed σ values of 0.05–0.16 S/cm at 50 °C in liquid water. Increasing temperature up to 120 °C resulted in further increase in proton conductivity. The co‐SPI membranes showed relatively good conductivity stability during the aging treatment in water at 100 °C for 300 h. © 2005 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 43: 1545–1553, 2005     

Molecular orientation and mechanical anisotropy of polypropylene sheet containing N,N′‐dicyclohexyl‐2,6‐naphthalenedicarboxamide

Effect of mixing and processing conditions at T‐die extrusion on the structure and mechanical properties is studied for isotactic polypropylene (PP) containing a small amount of β‐form nucleating agent, N,N′‐dicyclohexyl‐2,6‐naphthalenedicarboxamide. It is found that trigonal β crystals are predominantly formed in the extruded samples containing the nucleating agent irrespective of the mixing and processing conditions, leading to the marked mechanical toughness. On the contrary, the molecular orientation is significantly affected by the mixing and processing conditions. In particular, it should be noted that PP molecules in the extruded sheet which was mixed at high temperature (260 °C) and extruded at low temperature (200 °C) orient perpendicular to the applied flow direction. As a result, the sheet shows anomalous mechanical anisotropy. © 2009 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 47: 424–433, 2009     

A sequential sampling rule for selecting the most probable multinomial event

Summary A sequential sampling rule is given for selecting the most probable event from a multinomial distribution withk cells. A random number of observations is taken from the given multinomial distribution at each stage of sampling, where the number is distributed according to a Poisson distribution with mean λ. The sampling is stopped when the count in any cell is greater than or equal to a given positive integerN. The cell with the highest count is selected for the most probable event. The mathematical analysis of the problem is simplified as a result of the statistical independence of the cell frequencies due to the randomization of the sample number. The expected value of the stage when the sampling terminates is decreasing in λ. The sequential sampling scheme in which one observation is taken at a time until the highest cell count is equal toN, corresponds to λ→0. A table is given showing some properties of the given selection procedure.     

Recoverable deformation and morphology after uniaxial elongation of a polystyrene/linear low density polyethylene blend

The transient recoverable deformation ratio after melt elongation at various elongational rates and maximum elongations was investigated for pure polystyrene and for a 85 wt.% polystyrene/15 wt.% linear low density polyethylene (PS/LLDPE 85:15) blend at a temperature of 170 ^oC. The ratio p of the zero shear rate viscosity of LLDPE to that of PS is p = 0.059 ≈ 1:17. Retraction of the elongated LLDPE droplets back to spheres and end-pinching is observed during recovery. A simple additive rule is applied in order to extract the contribution of the recovery of the elongated droplets from the total recovery of the blend. In that way, the recoverable portion of the PS/LLDPE blend induced by the interfacial tension is determined and compared with the results of a theory based on an effective medium approximation. The effective medium approximation reproduces well the time scale of the experimental data. In addition, the trends that the recoverable deformation increases with elongational rate and maximum elongation are captured by the theoretical approach.     

Shear and normal stress relaxation in polymer blends: stress predictions from interface velocity and Laplace pressure terms

We derived for the first time the relationships among shear stress and normal stress differences for ellipsoidal interfaces under large step shear strains considering interface velocity term and Laplace pressure term in the expression of the stress tensor for mixtures of two Newtonian fluids. In the derivation, orientation angle of the interface is assumed to be given by the affine deformation assumption and is independent of time based on experimental results for blends with 0.048 ≤ K ≤ 0.54 where K is the ratio of droplet viscosity to matrix viscosity. For ellipsoidal droplets, the shear stress is only proportional to the first normal stress difference. On the other hand, for spheroidal droplets, proportionality among the shear stress, the first and the second normal stress differences was derived, and the ratio of the second normal stress difference to the first normal stress difference was given as a function of step strain. The shear stress and the first normal stress difference obtained experimentally satisfy the derived relationship, indicating applicability of the stress expression for polymer blends.     

A work softening joint element used in dynamic analysis of soil-structure

This paper introduces an elasto-plastic joint element characterised by strain hardening and softening in the analysis of dynamic soil-structure interaction. The phenomena of separation and sliding on the contact surface between soil and structure can be better simulated and the process can also be described. The interaction problems in a typical soil-structure system are analyzed in terms of elasto-plastic joint element as well as elastic ones. The results show that the elasto-plastic joint element is much better than the elastic one in modelling, especially in that the relative displacements accross the joint element can be much greater than that of the elastic case. Separation and sliding are not only related to the coefficient of friction and cohesion but also to their changes with plastic volumetric strain. The project is supported by the Sciences Foundation of the Chinese Academy of Sciences and the Disaster Provention Institute of Kyoto University (Japan).