Design and Synthesis of a Novel Ganglioside Ligand for Influenza A Viruses ^†

A novel ganglioside bearing Neua2-3Gal and Neua2-6Gal structures as distal sequences was designed as a ligand for influenza A viruses. The efficient synthesis of the designed ganglioside was accomplished by employing the cassette coupling approach as a key reaction, which was executed between the non-reducing end of the oligosaccharide and the cyclic glucosylceramide moiety. Examination of its binding activity to influenza A viruses revealed that the new ligand is recognized by Neua2-3 and 2-6 type viruses.     

Concise synthesis and anti-HIV activity of pyrimido[1,2-c][1,3]benzothiazin-6-imines and related tricyclic heterocycles

3,4-Dihydro-2H,6H-pyrimido[1,2-c][1,3]benzothiazin-6-imine (PD 404182) is a virucidal heterocyclic compound active against various viruses, including HCV, HIV, and simian immunodeficiency virus. Using facile synthetic approaches that we developed for the synthesis of pyrimido[1,2-c][1,3]benzothiazin-6-imines and related tricyclic derivatives, the parallel structural optimizations of the central 1,3-thiazin-2-imine core, the benzene part, and the cyclic amidine part of PD 404182 were investigated. Replacement of the 6-6-6 pyrimido[1,2-c][1,3]benzothiazin-6-imine framework with 5-6-6 or 6-6-5 derivatives led to a significant loss of anti-HIV activity, and introduction of a hydrophobic group at the 9- or 10-positions improved the potency. In addition, we demonstrated that the PD 404182 derivative exerts anti-HIV effects at an early stage of viral infection.     

CXCR4 Stimulates Macropinocytosis: Implications for Cellular Uptake of Arginine-Rich Cell-Penetrating Peptides and HIV

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Highlights? CXCR4 was identified as a receptor to stimulate cellular uptake of R12 peptide ? Interaction with R12 stimulates internalization of CXCR4 via macropinocytosis ? SDF-1α and HIV-1 gp120 protein also induce macropinocytosis ? Macropinocytic uptake of HIV-1 diminished the infection of host cells     

The charge‐transfer complex trans‐STB–TCNQF4

In the crystal structure of the title charge‐transfer complex, namely trans‐stilbene–2,2′‐(2,3,5,6‐tetra­fluoro­benzene‐1,4‐diyl­idene)­propane­di­nitrile (1/1) (trans‐STB–TCNQF₄), C₁₄H₁₂·C₁₂F₄N₄, the planar STB and TCNQF₄ mol­ecules are stacked alternately. The structure is not isostructural with that of STB–TCNQ. No anomaly was found in the displacement parameters of any atoms, while the bond length of the central C=C moiety was shorter than the corresponding bond in ethyl­ene. This suggests that the central C=C moiety of the STB mol­ecule vibrates with a large amplitude, similar to the case in free STB and STB–TCNQ.     

Water‐ and Temperature‐Triggered Reversible Structural Transformation of Tetranuclear Cobalt(II) Cores Sandwiched by Polyoxometalates

Although stimuli‐responsive structural transformations of inorganic materials have attracted considerable attention because of their potential use as functional switchable materials, multinuclear metal cores frequently suffer from unexpected dissociation of metal cations and/or irreversible transformations into infinite structures. In this study, we describe the successful demonstration of the water‐ and temperature‐triggered reversible structural transformation between cubane‐ and planar‐type tetranuclear Co^II cores sandwiched by polyoxometalates. The arrangements and coordination geometries of the Co^II cations were interconverted by simple hydration and dehydration, resulting in the manipulation of the magnetic and optical properties of these compounds. Moreover, this system showed unique thermochromism through temperature‐dependent reversible structural interconversion.     

Stochastic switching of subphthalocyanine arrays triggered by scanning tunneling microscopy

Single-molecular switching phenomena in monolayer arrays of subphthalocyanine adsorbed on Cu(1 0 0) surface were investigated by scanning tunneling microscopy (STM) under ultrahigh vacuum. The molecules evaporated on the surface arranged in a square lattice taking the Cu(1 0 0)SubPc(5 × 5) epitaxy. During continuous STM imaging at fixed tunneling conditions the topography of the individual molecules spontaneously changed between the high and low states. This topographic change was attributed to orientational switching between the upward and downward adsorption of the axial Cl atom of the molecule on the Cu surface. Molecular energy calculations and statistical thermodynamic evaluation concluded that the tip-triggered disturbance in the close-packed molecular array induced the molecular rearrangement accompanied with the stochastic orientational switching.     

Stability of Multidimensional Solitary Waves for Cubic-Quintic Nonlinearity

We show analytically that in the presence of cubic and quintic nonlinearities above a certain critical power, multidimensional optical solitary waves could propagate stably in bulk media. To investigate the stability an analytical expression for the solitary-wave fields with an arbitrary transverse dimension is derived through the combined use of Galerkin’s method and self-consistent-field approximation.     

Synthetic scope and mechanistic studies of Ru(OH)x/Al2O3-catalyzed heterogeneous hydrogen-transfer reactions

Three kinds of hydrogen-transfer reactions, namely racemization of chiral secondary alcohols, reduction of carbonyl compounds to alcohols using 2-propanol as a hydrogen donor, and isomerization of allylic alcohols to saturated ketones, are efficiently promoted by the easily prepared and inexpensive supported ruthenium catalyst Ru(OH)x/Al2O3. A wide variety of substrates, such as aromatic, aliphatic, and heterocyclic alcohols or carbonyl compounds, can be converted into the desired products, under anaerobic conditions, in moderate to excellent yields and without the need for additives such as bases. A larger scale, solvent-free reaction is also demonstrated: the isomerization of 1-octen-3-ol with a substrate/catalyst ratio of 20,000/1 shows a very high turnover frequency (TOF) of 18,400 h(-1), with a turnover number (TON) that reaches 17,200. The catalysis for these reactions is intrinsically heterogeneous in nature, and the Ru(OH)x/Al2O3 recovered after the reactions can be reused without appreciable loss of catalytic performance. The reaction mechanism of the present Ru(OH)x/Al2O3-catalyzed hydrogen-transfer reactions were examined with monodeuterated substrates. After the racemization of (S)-1-deuterio-1-phenylethanol in the presence of acetophenone was complete, the deuterium content at the alpha-position of the corresponding racemic alcohol was 91%, whereas no deuterium was incorporated into the alpha-position during the racemization of (S)-1-phenylethanol-OD. These results show that direct carbon-to-carbon hydrogen transfer occurs via a metal monohydride for the racemization of chiral secondary alcohols and reduction of carbonyl compounds to alcohols. For the isomerization, the alpha-deuterium of 3-deuterio-1-octen-3-ol was selectively relocated at the beta-position of the corresponding ketones (99% D at the beta-position), suggesting the involvement of a 1,4-addition of ruthenium monohydride species to the alpha,beta-unsaturated ketone intermediate. The ruthenium monohydride species and the alpha,beta-unsaturated ketone would be formed through alcoholate formation/beta-elimination. Kinetic studies and kinetic isotope effects show that the Ru-H bond cleavage (hydride transfer) is included in the rate-determining step.     

Biochemical, molecular genetic, and structural analyses of the staphylococcal nucleoid.

The nucleoid structure of an important human pathogen, Staphylococcus aureus, was dissected by atomic force microscopy (AFM). The nucleoids dispersed on a cover glass consisted of fibrous units with two different widths of 40 and 80 nm, a feature shared with those of Escherichia coli. On the other hand, cells exposed to an oxidative stress exhibited clogged nucleoids. A knock-out of mrgA (metallo regulated genes A) encoding a staphylococcal homolog of the nucleoid compaction factor (E. coli Dps) eliminated the compaction response to the oxidative stress and reduced the susceptibilities to H2O2 and UV irradiation. We also observed that the negative supercoiling of plasmids is increased by the oxidative stress. A possible interrelation between the helical density and the nucleoid compaction is discussed in relation to the oxidative stress response.     

Large third-order optical nonlinearity of self-assembled porphyrin oligomers.

Third-order nonlinear optical properties of two series of self-assembled porphyrin wires, one being terminated by zinc porphyrin and the other by free base porphyrin, were measured by femtosecond time-resolved optical Kerr effect. The hyperpolarizability values of the latter series were extremely large ranging from 10-30 to 10-29 esu, 10 times larger than the former. The behavior is accounted for by the contribution of terminal free base porphyrin to enhance the molecular polarization by acceptor nature toward central metalloporphyrin array.