Simultaneous determination of multiple intracellular metabolites in glycolysis, pentose phosphate pathway and tricarboxylic acid cycle by liquid chromatography-mass spectrometry

A highly selective and sensitive method for identification and quantification of intracellular metabolites involved in central carbon metabolism (including glycolysis, pentose phosphate pathway and tricarboxylic acid cycle) by means of liquid chromatography-tandem quadrupole mass spectrometry (LC-MS/MS) was developed. The volatile ion pair modifier tributylammonium acetate (TBAA) was employed in the mobile phase for simultaneously separation of 29 negatively charged compounds including sugar phosphates, nucleotides, and carboxylic acids on a common C18 reversed-phase column. Method validation results displayed that limits of detection (LODs) calculated according to DIN (German Institute for Standardization) 32645 are mostly below 60 nM, only with the exception of pyruvate and malate. The calibration curves showed excellent linearity mainly over three orders of magnitude with correlation coefficients R(2)>0.9982. This LC-MS/MS method was successfully applied to determine these metabolites in cell extracts of Escherichia coli. Most of the intracellular metabolites were found within the detection range and the relative standard deviations of the measurements were smaller than 5.65% (n=5) for a cell extract sample.     

Application of the Doehlert experimental design to molecularly imprinted polymers: surface response optimization of specific template recognition as a function of the type and degree of cross-linking

We propose the use of Doehlert’s experimental design, a second-order uniform shell design, for the optimization of molecularly imprinted polymers (MIPs). We have chosen a simple model system where the influence of kind and degree of cross-linking on template recognition was studied using S-propranolol as the template. We found that Doehlert’s design allows—with very few experiments—one to screen the evolution of the binding capacity of a MIP as a function the different parameters, and thus appears to be a powerful means to screen for the best composition and synthesis method for MIPs. We believe that this chemometric tool can significantly accelerate the development of new MIPs as synthetic recognition elements, particularly in the context of a given application, and will be a versatile complement or alternative to first-order designs to fit complex processes. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Atomic structure of Beta-tantalum nanocrystallites.

The structural properties of beta-phase tantalum nanocrystallites prepared by room temperature magnetron sputter deposition on amorphous carbon substrates are investigated at atomic resolution. For these purposes spherical aberration-corrected high-resolution transmission electron microscopy is applied in tandem with the numerical retrieval of the exit-plane wavefunction as obtained from a through-focus series of experimental micrographs. We demonstrate that recent improvements in the resolving power of electron microscopes enable the imaging of the atomic structure of beta-tantalum with column spacings of solely 0.127 nm with directly interpretable contrast features. For the first time ever, we substantiate the existence of grain boundaries of 30 degrees tilt type in beta-Ta whose formation may be well explained by atomic agglomeration processes taking place during sputter deposition.     

From Polyhalides to Polypseudohalides: Chemistry Based on Cyanogen Bromide

Pseudohalogens are defined as molecular entities that resemble the halogens in their chemistry. While our understanding of polyhalogen chemistry has increased over the last years, research on polypseudohalogen compounds is lacking. The pseudohalogen BrCN possesses a highly pronounced σ‐hole at the bromine side of the molecule, inducing strong halogen bonding. This allows the synthesis and characterization of new polypseudohalogen anions, as shown by the single‐crystal X‐ray diffraction of [PNP][Br(BrCN)] and [PNP][Br(BrCN)₃]. Both the nearly linear anion [Br(BrCN)]^? and the distorted pyramidal anion [Br(BrCN)₃]^? were characterized by Raman spectroscopy and quantum‐chemical calculations. The behavior of the polypseudohalogen compounds in solution and as room‐temperature ionic liquids (RT‐ILs) using the [NBu₄]⁺ cation was studied by ¹³C and ¹⁵N NMR spectroscopy. These types of ILs are capable of dissolving elemental gold and offer themselves as promising compounds in metal recycling.     

Procedure for background estimation in energy-dispersive X-ray fluorescence spectra

A method for semi-automatic background estimation in energy-dispersive x-ray fluorescence spectra is outlined. Two cubic splines were investigated and the spline called the Butland interpolant was chosen for further investigation. Prior to the calculation of the spline, peak regions are set up, and suitable knots are defined outside the peak regions. To set up the peak regions, an automatic peak-search routine and a calibration equation are used. For a given peak, the latter relates the full width at half maximum (FWHM) to the peak centre. In turn, the size of the peak regions are defined by the FWHM multiplied by a constant given by the user. The method was tested on several types of spectra. It was found that the optimal size of the peak region decreased with increasing peak density. Reproducibility tests showed that the standard deviation of the summation of counts within a peak region and after background subtraction was less than would be expected from the counting statistics.     

Tetrahalidometallate(II) Ionic Liquids with More than One Metal: The Effect of Bromide versus Chloride

Fifteen N-butylpyridinium salts – five monometallic [C₄Py]₂[MBr₄] and ten bimetallic [C₄Py]₂[M_0.5^aM_0.5^bBr₄] (M=Co, Cu, Mn, Ni, Zn) – were synthesized, and their structures and thermal and electrochemical properties were studied. All the compounds are ionic liquids (ILs) with melting points between 64 and 101 °C. Powder and single-crystal X-ray diffraction show that all ILs are isostructural. The electrochemical stability windows of the ILs are between 2 and 3 V. The conductivities at room temperature are between 10⁻⁵ and 10⁻⁶ S cm⁻¹. At elevated temperatures, the conductivities reach up to 10⁻⁴ S cm⁻¹ at 70 °C. The structures and properties of the current bromide-based ILs were also compared with those of previous examples using chloride ligands, which illustrated differences and similarities between the two groups of ILs.     

Control of reaction mechanisms in cationically polymerized epoxy resins facilitates the adjustment of morphology and mechanical properties

Structure–property relations of cationically polymerized epoxy thermosets with different morphologies are examined. The morphology adjustment of amorphous epoxy based copolymers and partially crystalline polymer alloys is carried out with star‐shaped poly(ε‐caprolactone) (SPCL) bearing various numbers of hydroxyl end groups. These hydroxyl groups are known for their reactivity toward epoxides following the activated monomer (AM) mechanism. For this reason, four‐armed SPCL was synthesized with four hydroxyl end groups (SPCL‐tetraol) and, in addition, with successively esterified ones down to a SPCL with four ester end groups (SPCL‐tetraester). SPCL species bearing fewer or no hydroxyl end groups segregate into needle‐like nanodomains within the epoxy networks and, if the concentration is high enough, also into crystalline domains. The stronger phase separation of SPCL‐tetraester within the epoxy network compared with SPCL‐tetraol is due to a reduction of the AM mechanism. The mechanical properties resulting from different morphologies lead to a trade‐off between higher storage moduli and T_g values in the case of the more phase separated (and partially crystalline) polymer alloys and higher strain at break in the case of the amorphous copolymers. Nevertheless, in both cases toughness is improved or at least kept on the same level as for the pure epoxy resin. © 2016 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2016 , 54, 2188–2199