Synthesis and NMR characterization of the cis and trans isomers of [Pt(II)(N9-adeH)2(pz)2] and X-ray crystallography of the trans isomer

The reaction of tetrapyrazine Pt(II) with adenine under basic conditions yielded two products both disubstituted by adenine and bound in all cases to the N-9 nitrogen of adenine. Crystals amenable to X-crystallographic analysis were obtained for one product which was consequently identified as trans-[Pt(II)(N9-adeH)2(pz)2](NO3)(4).H2O. The other product, though, was identified as the cis isomer based on extensive and comparative NMR structural studies whereby the two compounds were examined as both neutral and tetraprotonated species in solution. The major product of the reaction was unexpectedly the cis isomer, thus obtained in contrast to the trans effect, and the reason for this result is speculated on. Computational calculations using DFT at the B3LYP/TZVP-MARI-J level of theory provided the head-to-tail conformer as the overwhelmingly more stable species over the head-to-head conformer for both compounds whilst the trans product was found to be more stable than the cis. Thus the reaction does not follow a thermodynamic course and rather is kinetically controlled in concert with the speculated mode of reaction.     

Flow over a profile in a channel with dynamical effects

The work deals with a numerical solution of 2D inviscid incompressible flow over the profile NACA 0012 in a channel. The finite volume method in a form of cell‐centered scheme at quadrilateral C‐mesh is used. Governing system of equations is the system of Euler equations. Numerical results are partially compared with experimental data. Steady state solutions of the flow as well unsteady flows caused by prescribed oscillation of the profile were computed. The method of artificial compressibility and the time dependent method are used for computation of the steady state solution. (© 2004 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Synthesis and Catalytic Use of Gold(I) Complexes Containing a Hemilabile Phosphanylferrocene Nitrile Donor

Removal of the chloride ligand from [AuCl( 1 ‐κP)] ( 2 ) containing a P‐monodentate 1′‐(diphenylphosphanyl)‐1‐cyanoferrocene ligand ( 1 ), by using silver(I) salts affords cationic complexes of the type [Au( 1 )]X, which exist either as cyclic dimers [Au( 1 )]₂X₂ ( 3 a , X=SbF₆; 3 c , X=NTf₂) or linear coordination polymers [Au( 1 )]_nX_n ( 3 a′ , X=SbF₆; 3 b′ , X=ClO₄), depending on anion X and the isolation procedure. As demonstrated for 3 a′ , the polymers can be readily cleaved by the addition of donors, such as Cl^?, tetrahydrothiophene (tht) or 1 , giving rise to the parent compound 2 , [Au(tht)( 1 ‐κP)][SbF₆] ( 5 a ) or [Au( 1 ‐κP)₂][SbF₆] ( 4 a ), respectively, of which the last two compounds can also be prepared by stepwise replacement of tht in [Au( 1 ‐κP)₂][SbF₆]. The particular combination of a firmly coordinated (phosphane) and a dissociable (nitrile) donor moieties renders complexes 3/3′ attractive for catalysis because they can serve as shelf‐stable precursors of coordinatively unsaturated Au^I fragments, analogous to those that result from the widely used [Au(PR₃)(RCN)]X catalysts. The catalytic properties of the Au‐ 1 complexes were evaluated in model annulation reactions, such as the synthesis of 2,3‐dimethylfuran from (Z)‐3‐methylpent‐2‐en‐4‐yn‐1‐ol and oxidative cyclisation of alkynes with nitriles to produce 2,5‐disubstituted 1,3‐oxazoles. Of the compounds tested ( 2 , 3 a′ , 3 b′ , 3 a , 4 a and 5 a ), the best results were consistently achieved with dimer 3 c , which has good solubility in organic solvents and only one firmly bound donor at the gold atom. This compound was advantageously used in the key steps of annuloline and rosefuran syntheses.     

Interactions of cyclodextrins with aromatic compounds studied by vibrational circular dichroism spectroscopy

The host/guest complexation between cyclodextrins (CDs) and aromatic compounds was studied by vibrational circular dichroism (VCD) spectroscopy in mid-IR region. Benzoic acid, 4-aminobenzoic acid, and 2,6-naphthalene-dicarboxylic acid acting as the guests with aromatic skeleton, cause the significant changes in VCD patterns of CD, which indicate that the secondary hydroxyl groups of the CDs are involved in the host/guest complexation. In addition, the intensities and dissymmetry factors (deltaA/A) of the VCD bands, which belong to skeletal CD vibrations, depend on the sizes of the guest molecules. Our results indicate that the formation of the CD inclusion complexes can be followed by VCD spectroscopy.     

Numerical Analysis of the Rebellious Voter Model

The rebellious voter model, introduced by Sturm and Swart (2008), is a variation of the standard, one-dimensional voter model, in which types that are locally in the minority have an advantage. It is related, both through duality and through the evolution of its interfaces, to a system of branching annihilating random walks that is believed to belong to the ‘parity-conservation’ universality class. This paper presents numerical data for the rebellious voter model and for a closely related one-sided version of the model. Both models appear to exhibit a phase transition between noncoexistence and coexistence as the advantage for minority types is increased. For the one-sided model (but not for the original, two-sided rebellious voter model), it appears that the critical point is exactly a half and two important functions of the process are given by simple, explicit formulas, a fact for which we have no explanation.     

A ferrocenyl‐substituted pseudo­titanocene complex

The title compound, (η⁵‐cyclo­penta­dienyl)[(1,2,3,4,5‐η)‐4‐ferro­cenyl‐1,2,5,6‐tetrakis­(tri­methyl­silyl)­cyclo­hexa‐2,4‐dien‐1‐yl]­titanium(II), [TiFe(C₅H₅)₂(C₂₃H₄₂Si₄)] or [Ti{η⁵‐C₆H₂{Fe­(η⁵‐C₅H₄)(η⁵‐C₅H₅)}{Si(CH₃)₃}₄}(η⁵‐C₅H₅)], possesses two directly linked metallocene units that subtend an angle of 52.9 (1)° (defined by the least‐squares planes of the directly connected π‐ligands) associated with the steric requirements of the bulky tri­methyl­silyl substituents. The cyclo­hexa­dienyl ligand adopts an envelope conformation; the perpendicular distance of its η⁵‐plane to the Ti atom is 1.512 (1) Å.     

Determination of arsenic at a gold-plated carbon paste electrode using constant current stripping analysis

A new stripping method for the determination of arsenic in water samples with a gold film-plated carbon paste electrode has been developed for the use in constant current stripping analysis (CCSA). In the novelized procedure, differentiation between As(III) and chemically pre-reduced As(V), the effect of Cu(II) on the response of arsenic, and the stability of sample solutions were studied in detail. Compared to the voltammetric approach, the method utilizing CCSA offers a more rapid procedure with improved analytical characteristics such as reproducibility, selectivity over the Cu(II) ions, or lower detection limit (3 ppb for As(III) and 0.5 ppb for As(V), respectively). The possibilities of the optimized method are demonstrated by determinations of As(III), As(V), and total arsenic in samples of polluted river water.     

High‐throughput workflow for identification of phosphorylated peptides by LC‐MALDI‐TOF/TOF‐MS coupled to in situ enrichment on MALDI plates functionalized by ion landing

We report an MS‐based workflow for identification of phosphorylated peptides from trypsinized protein mixtures and cell lysates that is suitable for high‐throughput sample analysis. The workflow is based on an in situ enrichment on matrix‐assisted laser desorption/ionization (MALDI) plates that were functionalized by TiO₂ using automated ion landing apparatus that can operate unsupervised. The MALDI plate can be functionalized by TiO₂ into any array of predefined geometry (here, 96 positions for samples and 24 for mass calibration standards) made compatible with a standard MALDI spotter and coupled with high‐performance liquid chromatography. The in situ MALDI plate enrichment was compared with a standard precolumn‐based separation and achieved comparable or better results than the standard method. The performance of this new workflow was demonstrated on a model mixture of proteins as well as on Jurkat cells lysates. The method showed improved signal‐to‐noise ratio in a single MS spectrum, which resulted in better identification by MS/MS and a subsequent database search. Using the workflow, we also found specific phosphorylations in Jurkat cells that were nonspecifically activated by phorbol 12‐myristate 13‐acetate. These phosphorylations concerned the mitogen‐activated protein kinase/extracellular signal‐regulated kinase signaling pathway and its targets and were in agreement with the current knowledge of this signaling cascade. Control sample of non‐activated cells was devoid of these phosphorylations. Overall, the presented analytical workflow is able to detect dynamic phosphorylation events in minimally processed mammalian cells while using only a short high‐performance liquid chromatography gradient. Copyright © 2015 John Wiley & Sons, Ltd.     

State of the Art in the Field of Electronic and Bioelectronic Tongues – Towards the Analysis of Wines

This review compares various types of (bio)electronic tongues. The design and principles of potentiometric and voltammetric electronic tongues are discussed together with applications in food and environmental analysis. Different approaches towards bioelectronic tongue are presented. Several methods for evaluation and interpretation of the measured data are described. Finally, the potential of such devices for analysis of wine is discussed.     

Variational Average-Atom in Quantum Plasmas (VAAQP) – Recent progress, virial theorem and applications to the equation-of-state of warm dense Be

The Variational Average-Atom in Quantum Plasmas (VAAQP) code is based on a fully variational theory of dense plasmas in equilibrium in which the neutrality of the Wigner-Seitz ion sphere is not required, contrary to the Inferno model. We report on some recent progress in the VAAQP model and numerical code. Three important points of the virial theorem derivation are emphasized and explained. The virial theorem is also used as an important tool allowing us to check the formulas and numerical methods used in the code. Applications of the VAAQP code are shown using as an example the equation-of-state of beryllium in the warm dense matter regime. Comparisons with the Inferno model, and with available experimental data on the principal Hugoniot are also presented.