The racemization of an optically active sulfilimine and optically active aminosulfonium salts

The racemization of an optically active sulfilimine and optically active aminosulfonium salts was kinetically measured. The mechanism of the racemization of optically active sulfilimine (?)-1 has been established. The activation parameters for the racemization of (?)-1 and (?)-7 were calculated. A plausible pathway for the decomposition of (?)-6, (?)-7 and (?)-8 with tetra-n-butylammonium bromide in the presence of methyl ethyl ketone to provide 3-p-tolylthio-2-butanone 22 is proposed.     

Theoretical investigation of the rates of electron transfer processes Q−I + QII → QI + Q−II and Q−I + Q−II → QI + Q2−II in photosynthesis

A theoretical investigation on the rates of electron-transfer processes Q⁻_I + Q_II → Q⁻_I + Q⁻_II and Q⁻_I + Q⁻_II → Q_I + Q²⁻_II was carried out by using the Marcus theory of long-range electron transfer in solution. The molecular reorganizational parameter λ, the free-energy change ΔG⁰ for the overall reaction, and the electronic matrix element H_DA for these two processes were calculated from the INDO-optimized geometries of molecules Q_I, Q_II, and histidine. Q_I and Q_II are plastoquinones (PQ) which are hydrogen-bonded to a histidine each, and the two histidines may or may not be coordinated to a Fe²⁺ ion. The plastoquinone representing Q_I is additionally flanked by two peptide fragments. Each of the species (Pep)₂Q_I · His and His · Q_II has been considered to be immersed in a dielectric continuum that represents the surrounding molecules and protein folds. INDO calculations confirm the standard reduction potential for the first process (calculated 0.127 V; observed 0.13 V) and predict a midpoint potential of 0.174 V for the second process at 300 K at pH 7 (experimental value remains uncertain but is known to be close to 0.13 V). The plastoquinone fragment carries almost all the net charge (about 95.7%) in [PQ · His]⁻ and the net charge in [PQH · His]⁻. The electron is transferred effectively from the plastoquinone part of [(Pep)₂Q_I · His]⁻ to the plastoquinone moiety of Q_II · His in the first step and to the plastoquinone fragment of HisH⁺ · Q⁻_II in the second step. Therefore, we made use of the formula for the rate of through-space electron transfer from Q_I to Q_II (and to Q⁻_II). The plastoquinones are, of course, electronically coupled to histidines, and the transfer is, in reality, through the molecular bridge consisting of histidines and also Fe²⁺. The through-bridge effect is inherent in our calculation of ΔG⁰, H_DA, and the reorganization parameter λ. We investigated the correlation between half-times for the transfer and (D⁻¹_op− D⁻¹_s), where D_op and D_s are, respectively, optical and static dielectric constants of the condensed phase in the vicinity of the plastoquinones. We found that with reasonable values of D_op (2.6) and D_s (8.5) the experimental rates are adequately explained in terms of transfers from the plastoquinone moiety of Q_I to that of Q_II. The t_1/2 values calculated for the two processes are 247 and 472 μs in the absence of Fe²⁺ and 134 and 181 μs in the presence of Fe²⁺. These are in good agreement with the observed values which are ≈ 100 and ≈ 200 μs when Fe²⁺ is present in the matrix and which are known to be almost twice as large when the Fe²⁺ is evicted from the matrix. The present work also shows that the Marcus-Hush theory of long-range electron transfers can be successfully applied to the investigation of processes occurring in a semirigid condensed phase like the thylakoid membrane region. © 1997 John Wiley & Sons, Inc.     

Effect of Cold Atmospheric Pressure Plasma on Maize Seeds: Enhancement of Seedlings Growth and Surface Microorganisms Inactivation

Cold atmospheric pressure ambient air plasma generated by Diffuse Coplanar Surface Barrier Discharge (DCSBD) was investigated for inhibition of native microbiota and potentially dangerous pathogens (Aspergillus flavus, Alternaria alternata and Fusarium culmorum) on the maize surface. Moreover, the improvement of germination and growth parameters of maize seeds was evaluated. Maize (Zea mays L.; cv. Ronaldinio), one of the most important cultivated crops worldwide, was selected as the research material. Electrical measurements confirmed the high volume power density (80 W cm^?3) of DCSBD plasma. Non-equilibrium plasma state evaluated using optical emission spectroscopy showed values of vibrational and rotational temperature (2700?±?300) K and (370?±?75) K, respectively. Changes on the plasma treated seeds surface were studied by water contact angle measurement, scanning electron microscope analysis and Fourier transform infrared spectroscopy. A complete devitalisation of native microbiota on the surface of seeds was observed after a short treatment time of 60 s (bacteria) and 180 s (filamentous fungi). The plasma treatment efficiency of artificially contaminated maize seeds was estimated as a reduction of 3.79 log (CFU/g) in F. culmorum after a 60-s plasma treatment, 4.21 log (CFU/g) in A. flavus and 3.22 log (CFU/g) in A. alternata after a 300-s plasma treatment. Moreover, the obtained results show an increase in wettability, resulting in a better water uptake and in an enhancement of growth parameters. The investigated DCSBD plasma source provides significant technical advantages and application potential for seed surface finishing without the use of hazardous chemicals.     

Hybridization of PNA to structured DNA targets: quadruplex invasion and the overhang effect

Peptide nucleic acid (PNA) probes have been synthesized and targeted to quadruplex DNA. UV-vis and CD spectroscopy reveal that the quadruplex structure of the thrombin binding aptamer (TBA) is disrupted at 37 degrees C by a short PNA probe. The corresponding DNA probe fails to bind to the stable secondary structure at this temperature. Thermal denaturation experiments indicate surprisingly high thermal and thermodynamic stabilities for the PNA-TBA hybrid. Our results point to the nonbonded nucleobase overhangs on the DNA as being responsible for this stability. This "overhang effect" is found for two different PNA-DNA sequences and a variety of different overhang lengths and sequences. The stabilization offered by the overhangs assists the PNA in overcoming the stable secondary structure of the DNA target, an effect which may be significant in the targeting of biological nucleic acids, which will always be much longer than the PNA probe. The ability of PNA to invade a structured DNA target expands its potential utility as an antigene agent or hybridization probe.     

Kinetics and mechanism of the oxidation of acetaldehyde by chromic acid in perchloric acid

Summary The oxidation of MeCHO by chromium(VI) has been studied in HClO₄ medium over a wide range of experimental conditions and has been found to obey the rate law;v=k[MeCHO][HCrO ₄ ^– ][H⁺]. The calculated H and-S values for the reaction are 30±2kJ mol^–1 and 171±7J mol^–1deg^–1, respectively. The mechanism is discussed in terms of carbon-hydrogen bond cleavage.     

Thallium fractionation in polluted environmental samples using a modified BCR three-step sequential extraction procedure and its determination by electrothermal atomic absorption spectrometry

Determination of thallium in polluted environmental samples and their extracts obtained by a modified BCR three-step sequential extraction procedure was used to study thallium distribution and mobility in the monitored polluted area affected by acidification (Šobov, Central Slovakia). The results of fractionation applied to 5 soil certified reference materials and 14 environmental samples show that the vast majority of thallium occurred in the residual fraction. This means that highly toxic thallium is strongly entrapped in the parent rock materials remains immobile and its environmental toxicity is therefore reduced. The limit of detection for thallium in the studied fractions was lower than 0.050 mg kg⁻¹, the precision (RSD) of the ultratrace determination of thallium in the studied fractions was better than 17 % and the accuracy of the used method was verified by analyzing certified reference materials. Presented at the XVIIIth Slovak Spectroscopic Conference, Spišská Nová Ves, 15–18 October 2006.     

Intraband effects on ultrafast pulse propagation in semiconductor optical amplifier

High bit-rate (>10 Gb/s) signals are composed of very short pulses and propagation of such pulses through a semiconductor optical amplifier (SOA) requires consideration of intraband phenomena. Due to the intraband effects, the propagating pulse sees a fast recovering nonlinear gain which introduces less distortion in the pulse shape and spectrum of the output pulse but introduces a positive chirping at the trailing edge of the pulse.     

Line strengths and transition probabilities for allowed transitions in Fe XXI

Configuration interaction wavefunctions, transition energies, line strengths and transition probabilities for allowed transitions within then=2 complex of C-like Fe XXI have been calculated in the LS coupling scheme. We included internal, semi-internal, and all-external types of correlations. We compare our non-relativistic line strengths values with those of relativistic calculations in the Breit-Pauli approximation. The relativistic effects on line strengths are negligible for all transitions except for the transition¹ D ^e →¹ D ⁰. Experimental wavelengths are used in the calculation of transition probabilities.