Single-Step N-Terminal Modification of Proteins via a Bio-Inspired Copper(II)-Mediated Aldol Reaction

The chemical modification of proteins is an effective technique for manipulating the properties and functions of proteins, and for creating protein-based materials. The N-terminus is a promising target for single-site modification that provides modified proteins with uniform structures and properties. In this paper, a copper(II)-mediated aldol reaction with 2-pyridinecarboxaldehyde (2-PC) derivatives is proposed as an operationally simple method to selectively modify the N-terminus of peptides and proteins at room temperature and physiological pH. The copper(II) ion activates the N-terminal amino acids by complexation with an imine of the N-terminal amino acid and 2-PCs, realizing the selective formation of the nucleophilic intermediate at the N-terminus. This results in a stable carbon-carbon bond between the 2-PCs and the α-carbon of various N-terminal amino acids. The reaction is applied to four different proteins, including biopharmaceuticals such as filgrastim and trastuzumab. The modified trastuzumab retains the human epidermal growth factor receptor 2 recognition activity.     

Synthesis of 1-Trimethylsilyladamantane

The title compound was obtained from 1,3-dichloro-adamantane and some silylating reagents with Na-HMPA.     

Syntheses,Structures, and Reactivities of Sulfur-Containing Cycloalkenes

Sulfur-containing cycloalkenes possessing disulfide units 1, 2, and 3 were obtained by oxidation of cis-disodium ethene-1,2-dithiolate, and their crystal structures were determined by the X-ray crystallographic analyses. Compound 1 was found to give the ring expansion product 3 in acetonitrile even at room temperature and also form reactive thioaldehyde under irradiation.     

Opening and Addition Modes in Propagation During Radical Polymerization of Fumaric and Maleic Derivatives

Abstract

Polymers of bis(trimethylsilyl) fumarate, di-tert-amyl fumarate, and methyl tert-amyl fumarate were prepared by radical polymerization at 60 or 120°C. The polymers were converted into poly(dimethyl fumarate) via thermolysis or hydrolysis and subsequent methylation to determine the tacticity using ¹³C-NMR spectroscopy. The probabilities of meso addition (P _m) were revealed to be 0.66 (60°C) for the bis(trimethylsilyl) ester, 0.60 (60°C) and 0.52 (120°C) for the di-tert-amyl ester, and 0.54 (60 and 120°C) for the methyl tert-amyl ester. From the temperature dependence of the P _m values, the differences in activation enthalpies and entropies for the meso and racemo additions were evaluated. The microstructure of poly(dimethyl fumarate) derived from poly(maleic anhydride) was also examined. The opening and addition modes in propagation of the fumaric and maleic derivatives were discussed based on the results obtained in the present and previous work.     

Reactions of Thiazolo[3,2-b]-1,2,4-triazolium N-Ylides with Electron-deficient Acetylenes: Novel Benzoyl Migration of Intermediary 1:1-Adducts and Michael Addition to the Acetylenes

Abstract

Reactions of thiazolo[3,2-b]-1,2,4-triazolium N-methylides with electron-deficient acetylenes gave the thiazole ring-opened products as a mixture of the E-and Z-isomers. In contrast, the N-phenacylides reacted with dimethyl acetylenedicarboxylate to give the thiobenzoates together with the thiazole ring-opened products. The mechanism for formation of these compounds is described.     

Universal fluorescent labeling of amplification products using locked nucleic acids

Amplification/hybridization‐based genetic analyses using primers containing locked nucleic acids (LNAs) present many benefits. Here, we developed a novel design for universal fluorescent PCR using LNAs. Universal fluorescent PCR generates intermediate nonlabeled fragments and final fluorescent fragments in a two‐step amplification process that uses locus‐specific primers with universal tails and universal fluorescent primers. In this study, a few standard nucleotides were replaced with LNAs only in the fluorescent universal primers. The sequence of the fluorescent universal primer significantly affected the amplification efficiency. For primers with three LNAs, the fluorescent primers with stable M13(‐47) sequences provided the most efficient signal (approximately tenfold higher than the primers with M13(‐21) sequences at lower Tm values). Moreover, AT‐rich LNA substitutions in the fluorescent primers produced much lower amplification efficiencies than GC‐rich substitutions. GC‐rich LNAs produced greater differences in Tm values among primers, and resulted in the preferential production of fluorescently labeled amplicons. The specificity and sensitivity of LNA‐containing fluorescent primers were assessed by genotyping eight STRs in Japanese individuals, and full STR profiles could be generated using as little as 0.25 ng of genomic DNA. The method permitted clear discrimination of alleles and represents sensitive STR genotyping at a reduced cost.