Synthesis of a selective estrogen receptor β-modulator via asymmetric phase-transfer catalysis

An efficient asymmetric synthesis of selective estrogen receptor β-modulator (S)-4-bromo-9a-butyl-8-chloro-6-fluoro-7-hydroxy-1,2,9,9a-tetrahydro-fluoren-3-one was developed. The route features a chemoselective aromatic chlorination reaction, an asymmetric phase-transfer-catalyzed alkylation of an indanone with efficient ee upgrade by racemate crystallization, and a robust bromination reaction using imidazole as an in situ bromine trap to avoid overreaction. The synthesis proceeds in 34% yield over 8 steps from 2-fluoroanisole, and provides material with >99.5% ee.     

OptiDock: virtual HTS of combinatorial libraries by efficient sampling of binding modes in product space

Products from combinatorial libraries generally share a common core structure that can be exploited to improve the efficiency of virtual high-throughput screening (vHTS). In general, it is more efficient to find a method that scales with the total number of reagents (Sigma growth) rather with the number of products (Pi growth). The OptiDock methodology described herein entails selecting a diverse but representative subset of compounds that span the structural space encompassed by the full library. These compounds are docked individually using the FlexX program (Rarey, M.; Kramer, B.; Lengauer, T.; Klebe, G. J. Mol. Biol. 1995, 251, 470-489) to define distinct docking modes in terms of reference placements for combinatorial core atoms. Thereafter, substituents in R-cores (consisting of the core structure substituted at a single variation site) are docked, keeping the core atoms fixed at the coordinates dictated by each reference placement. Interaction energies are calculated for each docked R-core with respect to the target protein, and energies for whole compounds are calculated by finding the reference core placement for which the sum of corresponding R-core energies is most negative. The use of diverse whole compounds to define binding modes is a key advantage of the protocol over other combinatorial docking programs. As a result, OptiDock returns better-scoring conformers than does serially applied FlexX. OptiDock is also better able to find a viable docked pose for each library member than are other combinatorial approaches.     

The triplet-state lifetime of indole in aqueous and viscous environments: significance to the interpretation of room temperature phosphorescence in proteins

The interpretation of room temperature phosphorescence studies of proteins requires an understanding of the mechanisms governing the tryptophan triplet-state lifetimes of residues fully exposed to solvent and those deeply buried in the hydrophobic core of proteins. Since solvents exposed tryptophans are expected to behave similarly to indole free in solution, it is important to have an accurate measure of the triplet state lifetime of indole in aqueous solution. Using photon counting techniques and low optical fluence (J/cm(2)), we observed the triplet-state lifetime of aqueous, deoxygenated indole and several indole derivatives to be approximately 40 micros, closely matching the previous reports by Bent and Hayon based on flash photolysis (12 micros; Bent, D. V.; Hayon, E. J. Am. Chem. Soc. 1975, 97, 2612-2619) but much shorter than the 1.2 ms lifetime observed more recently (Strambini, G. B.; Gonnelli, M. J. Am. Chem. Soc. 1995, 117, 7646-7651). However, we have now been able to reproduce the long lifetime reported by the latter workers for aqueous indole solutions and show that it likely arises from geminate recombination of the indole radical cation and solvated electron, a conclusion based on studies of the indole radical cation in water (Bent and Hayon, 1975). The evidence for this comes from a fast rise in the phosphorescence emission and measurements of a corresponding enhanced quantum yield in unbuffered solutions. This species can be readily quenched, and the corresponding fast rise disappears, leaving a monoexponential 40 micros decay, which we argue is the true indole triplet lifetime. The work is put in the context of room temperature phosphorescence studies of proteins.     

Axially Dissymmetric Diphosphines in the Biphenyl Series: Synthesis of (6,6′-Dimethoxybiphenyl-2,2′-diyl)bis(diphenylphosphine)(‘MeO-BIPHEP’) and Analogues via an ortho-Lithiation/Iodination Ullmann-Reaction Approach

The new axially dissymmetric diphosphines (R)- and (S)-(6,6′-dimethoxybiphenyl-2,2′-diyl)bis(diphenyl phosphine) ((R)- and (S)- 5a ; ‘MeO-BIPHEP’) and the analogues (R)- and (S)- 5b and 5c have been synthesized in enantiomerically pure form. These ligands have become readily available by a synthetic scheme which employs, as key steps, an ortho-lithiation/iodination reaction of the (m-methoxyphenyl)diprienylphosphine oxides 8 and a subsequent Ullmann reaction of the resulting iodides 9 to provide the racemic bis(phosphine oxides) 10 . The bis(phosphine oxides) 10 subsequently are resolved with (?)-(2R,3R)- and (+)-(2S,3S)-O-2,3-dibenzoyltartaric acid and reduced to diphosphines 5 . The Ullmann reaction constitutes a new and efficient route to 2,2′-bis(phosphinoyl)-substituted biphenyl systems. Absolute configurations were established for (R)- 5a by X-ray analysis of the derived Pd complex (R,R)- 17a , and for 5b and 5c by means of ¹H-NMR comparisons of the derived Pd complexes 16 or 17 , respectively, and by means of CD comparisons. The MeO-BIPHEP diphosphine 5a proved to be as efficient as the previously described BIPHEMP diphosphine ((6,6′-dimethylbiphenyl-2,2′-diyl)bis(diphenylphosphine)) in enantioselective isomerizations and hydrogenations.     

On the projection of many-electron spin eigenstates

A translation is made of spin projection methods into the language of second quantization. This leads to a new formula for the Sanibel coefficients and expressions convenient to use for automatic calculation of spin projections.     

The sulfinyl moiety as an internal nucleophile. Part 8: Efficient, stereospecific synthesis of (+)-polyoxamic acid

A straightforward and stereospecific synthesis of (+)-polyoxamic acid is disclosed. The key step of the synthesis involves the regio- and stereospecific bromohydration of an olefin via intramolecular participation by the sulfinyl group.     

Stokes/anti-stokes intensity ratio in the resonance region

Relative intensities of the Stokes and anti-Stokes Raman lines associated with the I-I stretching mode of I₂ and symmetric stretching mode of MnO^?₄ are presented. The data indicate that the maxima in the excitation profile of the anti-Stokes scattering are shifted from those of the Stokes scattering. The experimental Stokes/anti-Stokes intensity ratios agree with the theoretical values obtained with parameters from the electronic absorption spectra.     

Vinylation and polymerization with trivinylaluminum. I. Vinylation of organic halides as a model for termination in cationic polymerization leading to vinyl end groups

An improved synthesis of trivinylaluminum (V₃Al) is described. The proton magnetic resonance (PMR) spectrum of V₃Al was recorded and analyzed. A new vinylation method involving the use of V₃Al as the vinylating agent has been developed, and the vinylation of organic halides by V₃Al was studied at ?30, ?50 and ?70°C. Primary alkyl chlorides, such as methyl and methylene chloride, do not react with V₃Al and were used as solvents. Secondary chlorides such as 2-chloropropane also do not react. t-Butyl chloride gives rise to t-butylethylene (70–98%), depending on reaction conditions, and the allylic chlorides, 3-chloro-1-butene, and 3-chloro-3-methyl-1-butene, yield the expected vinylated products and their isomers (～90%). Allyl and benzyl chloride do not react under the conditions tried. The reaction between V₃Al and the ditertiary dichloride 2,6-dichloro-2,6-dimethylheptane yields several isomeric C₁₃H₂₄ and C₁₁H₂₀ hydrocarbons; however, surprisingly, C₉H₁₆ does not form. The C₁₃ hydrocarbons arise by divinylation at the termini of the dichloride, while the C₁₁ hydrocarbons are formed by vinylation at one and proton elimination at the other terminus of the dichloride. The presence of unsaturated C₁₃H₂₄ and C₁₁H₂₀ isomers is most likely due to proton induced isomerization. These results are explained by a proximity effect involving vinylation at one end of the dichloride by V₃Al followed by rapid reaction of the second chlorine (mostly) by V₂AlCl generated in situ during the first vinylation in the proximity of the chloride. At the other chlorine terminus V₂AlCl causes either a second vinylation (leading to C₁₃ hydrocarbons) or a proton elimination (leading to C₁₁ hydrocarbons). The absence of C₉H₁₆ among the reaction products indicates that V₃Al exclusively effects vinylation. The RCl + V₃Al ← RV + V₂AlCl reaction may be regarded as a model for initiation followed by immediate termination in cationic olefin polymerization, a process leading to vinyl-ended polymers.     

[η5-cyclopentadien-1-YL-η4-tetraphenylcyclobutadienecobalt]diphenylmethylium hexafluorophosphate: A metal-stabilized carbonium ion salt

Mercuration of η⁵-cyclopentadienyl-η⁴-tetraphenylcyclobutadienecobalt, followed by transmetalation with n-butyllithium and reaction of the lithium derivative with benzophenone gave η⁴-Ph₄C₄Coη⁵-C₅H₄CPh₂OH. Treatment of this alcohol produced the [η⁴-Ph₄C₄CoC₅H₄CP₂]⁺ cation. This species reacted as a carbon electrophile with methanol, monomethylamine and N-methylpyrrole, as a cobalt electrophile with N,N-dimethylaniline and anisole. In the latter process the C₅H₄CPh₂ ligand was displaced and the η⁶-arene-η⁴-tetraphenylcyclobutadienecobalt complexes were formed. Similar reactions with benzene, toluene and mesitylene proceeded only in the presence of aluminum chloride. The bonding in the cation is discussed on the basis of this chemistry and ¹³C NMR studies.     

An ammonium ion-specific electrode

An ammonium ion-specific electrode was prepared by coupling a hydrophobic ammonia-permeable membrane to a Beckman monovalent cation electrode. At physiological pH values the ratio of ammonia to ammonium ion is only 0.01, yet the gas-transport mechanism is still operable; an electrode designed on this principle was able to detect ammonium ion produced via the urea-urease reaction. The electrode can be operated in an air stream or in an aqueous medium. The electrode can also be used in an ultra-sensitive mode by pH stripping of ammonia from the test solution.