Basis-independent potential energy curves for the neutral diatomics of Li,Na and K evaluated by means of Hartree-Fock and different density functional potentials

Summary The solution of the Schrödinger equation for diatomic molecules when the finite element method is used gives the possibility to evaluate highly accurate basis-independent potential energy curves. In this work such types of numerically accurate potential energy curves on the HF level have been evaluated for Li₂, Na₂ and K₂ and could be used as benchmarks in the optimization of basis sets. A comparison between recent LCAO HF calculations in which extended basis sets are used and the accurate values determined in this work show that there is a difference in total energy of 4×10^–5 and 10^–3 a.u. for Li, Li₂, and Na, Na₂, respectively. Evaluated dissociation energies are, however, due to the cancellation of numerical errors in much better agreement. Further, it is found that different exchange correlation potentials for the heavier molecules such as those given by von Barth-Hedin and Vosko, Wilk and Nusair reproduce experimental properties such as dissociation energies, vibrational frequencies almost as well as those achieved with advanced CI methods. TheX potential gives accurate bond lengths for Na₂ and K₂, whereas the dissociation energies are too small.     

Ring-closing metathesis of chiral allylamines. Enantioselective synthesis of (2S,3R,4S)-3,4-dihydroxyproline

The ring-closing metathesis (RCM) of two types of unsaturated chiral allylamines III, easily available from enantiomerically enriched epoxy alcohols, has been studied. Fully protected allylamines IIIa [(1)R = CH(2)-(CH(2))(n)()-CH=CH(2); (2)R = Boc; (3)R = PMB] have been prepared from unsaturated epoxy alcohols, whereas bis-allylamines IIIb ((1)R = Ph, (2)R = allyl,(3)R = Boc or PMB) have been prepared from 2,3-epoxy-3-phenylpropanol. Both types have been subjected to RCM to provide either cyclic allylamine I or II. The synthetic potential of these intermediates has been demonstrated by the enantioselective synthesis of (2S,3R,4S)-3,4-dihydroxyproline.     

Characterisation of pitch by HPLC

Summary A new high performance liquid chromatography method for the characterisation of toluene-soluble fractions of pitches has been developed. Although a chromatographic system typical of size exclusion chromatography was used, results indicate that, for these structurally complex samples, separation does not follow the usual discrimination by molecular size. A differentiation between several classes of polyaromatic hydrocarbons is achieved instead. Data are reported on the analysis of individual standard polyaromatic hydrocarbons, showing that four different elution ranges can be observed: three ofcata-condensed compounds (Cata1, Cata2 and Cata3) and one ofperi-condensed compounds (Peri). Results are reported proving the capacity of this high performance liquid chromatography method to distinguish between pitches of different origin and nature. It is also effective for the study of the chemical reactions occurring during heat treatment.     

Kinetics and mechanism of substitution reactions of complexes,XX

Thermal decomposition of 21 complexes of the type [Co(DH)₂(amine)₂]NCS has been studied under the conditions of thermogravimetric analysis, by using different heating rates. From the thermogravimetric curves apparent kinetic parameters of the pyrolysis reaction have been derived by means of the modified Doyle method. Apparent reaction order increases and apparent activation energy decreases with increasing heating rate. Thus, the obtained kinetic parameters do not characterize the purely chemical reaction, but the complex heterogeneous process as a whole. The explanation of the observed effect is discussed. Results are compared with those obtained with other analogous complexes.

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Zusammenfassung Die thermische Zersetzung von 21 Komplexen des Typs [Co(DH)₂(Amin)₂]NCS wurde thermogravimetrisch bei verschiedenen Aufheizungsgeschwindigkeiten untersucht. Aus den TG-Kurven wurden die scheinbaren kinetischen Parameter der Reaktion mit Hilfe der Doyleschen Methode ermittelt. Bei zunehmender Aufheizungsgeschwindigkeit wächst die scheinbare Reaktionsordnung während die scheinbare Aktivierungsenergie abnimmt. Die erhaltenen chemischen Parameter kennzeichnen nicht die eigentliche chemische Reaktion, sondern den ganzen komplexen heterogenen Vorgang. Die beobachteten Effekte wurden diskutiert und die Ergebnisse verglichen mit Resultaten von Untersuchungen anderer analoger Komplexe.

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Résumé On a étudié par thermogravimétrie, avec différentes vitesses d'échauffement, la décomposition thermique de 21 complexes du type [Co(DH)₂(amine)₂SCN. On a calculé suivant la méthode deDoyle les paramètres cinétiques apparents déduits des courbes d'ATG. L'ordre apparent de la réaction augmente si la vitesse d'échauffement croît, alors que l'énergie d'activation apparente décroît. Les paramètres cinétiques obtenus ne caractérisent que le processus hétérogène complexe et non la réaction chimique proprement dite. Les effets observés ont été discutés et comparés avec les résultats obtenus avec d'autres complexes analogues.

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21 [(D)₂()₂]NS , . . . , , . . , .

     

Binuclear wirelike dimers based on ruthenium(II)-bipyridine units linked by ethynylene-oligothiophene-ethynylene bridges

The syntheses, structural characteristics, electrochemical behavior, ground-state spectra, photophysical properties, and transient absorption (TA) spectra in CH(3)CN solvent are reported for binuclear [(bpy)(2)Ru(bpy-E(T)(n)()E-bpy)Ru(bpy)(2)](4+) complexes, Ru(bpyT(n)bpy)Ru, where the Ru-based units are connected by alternating 3,4-dibutylthiophene (DBT')/thiophene (T') fragments linked via ethynyl groups (E) to bpy ligands at the 5-position (bpy is 2,2'-bipyridine). The ligand bpyT(3)bpy represents a module containing DBT'/T'/DBT' subunits, and bpyT(5)bpy accounts for a DBT'/T'/DBT'/T'/DBT' pattern. The syntheses and electrochemical and spectroscopic (emission and TA) properties in CH(2)Cl(2) solvent of the bpyT(n)()bpy ligands are likewise reported. The behavior of the Ru(bpyT(n)bpy)Ru dimers has been compared to that of the bpyT(n)bpy ligands and to that of a related mononuclear complex, [(bpy)(2)Ru(bpy-E-DBT')](2+), Ru(bpyDBT'). For the dimeric complexes, the electrochemical results show that the first reduction step takes place at the bpy ligand(s) bearing an ethynylene group, the first oxidation step is thiophene-centered, and further oxidation involves the metal centers, which are only weakly interacting. The photophysical and TA results for the Ru(bpyT(n)bpy)Ru dimers account for the presence of low-lying oligothiophene-centered (3)pi,pi levels, while higher-lying metal-ligand charge transfer ((3)MLCT) levels are thermally accessible only for the case of Ru(bpyT(3)bpy)Ru; the possible role of charge separation (CS) levels (from oxidation at the thiophene bridge and reduction at one of the coordinated bpy's) is also discussed.     

Effective interactions in the colloidal suspensions from hypernetted-chain theory

The hypernetted-chain (HNC) Ornstein-Zernike integral equations are used to determine the properties of simple models of colloidal solutions where the colloids and ions are immersed in a solvent considered as a dielectric continuum and have a size ratio equal to 80 and a charge ratio varying between 1 and 4000. At an infinite dilution of colloids, the effective interactions between colloids and ions are determined for ionic concentrations ranging from 0.001 to 0.1 mol/l and compared to those derived from the Poisson-Boltzmann theory. At finite concentrations, we discuss on the basis of the HNC results the possibility of an unambiguous definition of the effective interactions between the colloidal molecules.     

Staphylococcus aureus bicomponent gamma-hemolysins, HlgA, HlgB, and HlgC, can form mixed pores containing all components

Staphylococcal gamma-hemolysins are bicomponent toxins forming a protein family with leucocidins and alpha-toxin. Two active toxins (AB and CB) can be formed combining one of the class-S components, HlgA or HlgC, with the class-F component HlgB. These two gamma-hemolysins form pores with marked similarities to alpha-toxin in terms of conductance, nonlinearity of the current-voltage curve, and channel stability in the open state. AB and CB pores, however, are cation-selective, whereas alpha-toxin is anion-selective. gamma-Hemolysins' pores are hetero-oligomers formed by three or four copies of each component (indicated as 3A3B and 3C3B or 4A4B and 4C4B). Point mutants located on a beta-strand of the class-S component that forms part of the protomer-protomer contact region can prevent oligomer assembly. Interestingly, these mutants inhibit growth of pores formed not only by their natural components but also by nonstandard components. This lead to the hypothesis that mixed ABC pores could also be formed. By studying the conductance of pores, assembled in the presence of all three components (in different ratios), it was observed that the magnitudes expected for mixed pores were, indeed, present. We conclude that the gamma-hemolysin/leucocidin bicomponent toxin family may form a larger than expected number of active toxins by cross-combining various S and F components.     

Ring currents as probes of the aromaticity of inorganic monocycles : P5-, As5-, S2N2, S3N3-, S4N3+, S4N42+, S5N5+, S42+ and Se42+

Current-density maps were calculated by the ipsocentric CTOCD-DZ/6-311G** (CTOCD-DZ=continuous transformation of origin of current density-diamagnetic zero) approach for three sets of inorganic monocycles: S(4) (2+), Se(4) (2+), S(2)N(2), P(5) (-) and As(5) (-) with 6 pi electrons; S(3)N(3) (-), S(4)N(3) (+) and S(4)N(4) (2+) with 10 pi electrons; and S(5)N(5) (+) with 14 pi electrons. Ipsocentric orbital analysis was used to partition the currents into contributions from small groups of active electrons and to interpret the contributions in terms of symmetry- and energy-based selection rules. All nine systems were found to support diatropic pi currents, reinforced by sigma circulations in P(5) (-), As(5) (-), S(3)N(3) (-), S(4)N(3) (+), S(4)N(4) (2+) and S(5)N(5) (+), but opposed by them in S(4) (2+), Se(4) (2+) and S(2)N(2). The opposition of pi and sigma effects in the four-membered rings is compatible with height profiles of calculated NICS (nucleus-independent chemical shifts).     

Evaluation of soybean seed protein extraction focusing on metalloprotein analysis

Two methods of protein extraction for soybean seeds were evaluated in terms of preservation of the metal ions bound to proteins after the extraction and separation procedures. The proteins were firstly separated according to their molar masses by polyacrylamide gel electrophoresis. Then, the protein bands were mapped by synchrotron radiation X-ray fluorescence in order to establish which metal ions were present in each one. Finally, some mapped protein bands were decomposed by microwave-assisted combustion and Ca, Cu, K, Mg, Mn, and Zn were quantified by inductively coupled plasma mass spectrometry or inductively coupled plasma optical emission spectrometry. The extraction methods studied were Method A (based on the treatment of ground soybean seeds with hexane and their extraction with Tris–HCl and β-mercaptoethanol) and Method B (based on the treatment of ground soybean seeds with petroleum ether and their extraction with Tris–HCl, dithiothreitol, phenylmethanesulfonyl fluoride, sodium dodecyl sulfate and potassium chloride). The best method was Method B, in which a 78% higher extraction efficiency was obtained when compared to Method A. Additionally, the metal-protein interactions were more appropriately preserved when Method B was applied, where the most affected ions were those that are bound weakly to proteins, such as Ca, K, and Mg.