meso-Aryl substituted rubyrin and its higher homologues: structural characterization and chemical properties

meso-Aryl substituted rubyrin ([26]hexaphyrin(1.1.0.1.1.0)) 2 and a series of rubyrin-type large expanded porphyrins were obtained from a facile one-pot oxidative coupling reaction of meso-pentafluorophenyl substituted tripyrrane 1. The structures of two of the resulting products were determined by single-crystal X-ray diffraction analysis. Whereas [52]dodecaphyrin(1.1.0.1.1.0.1.1.0.1.1.0) 4 takes a symmetric helical conformation, the larger species, [62]pentadecaphyrin(1.1.0.1.1.0.1.1.0.1.1.0.1.1.0) 5, adopts a nonsymmetric distorted conformation in the solid state that contains an intramolecular helical structure. The ability of rubyrin 2 to act as an anion receptor in its diprotonated form (2(.)2H(+)) was demonstrated in methanolic solutions. Oxidation of 2 with MnO(2) gave [24]rubyrin 6, a species that displays antiaromatic characteristics. [26]Rubyrin 2 and [24]rubyrin 6 both underwent metallation when reacted with Zn(OAc)(2) to give the corresponding bis-zinc(II) complexes 7 and 8 quantitatively without engendering a change in the oxidation state of the ligands. As a result, complexes 7 and 8 exhibit aromatic and antiaromatic character, respectively. NICS calculation on these compounds also supported aromaticity of 2 and 7, and antiaromaticity of 6 and 8.     

Hypervalent hydridosilicates: synthesis, structure and hydride bridging

A range of hydridosilicate anions has been prepared and characterised by spectroscopic, structural and computational methods. The general approach involved reaction of KH with a neutral silane precursor in the presence of [18]crown-6. In this manner, [K([18]crown-6)]+ salts of [Ph3SiH2](-) (1), [Ph3SiF2](-) (9), and [(p-FC6H4)3SiHF](-)/[(p-FC6H4)3SiH2](-) (12) were stabilised and characterized by NMR spectroscopy and X-ray diffraction. In each case, the anion adopts a trigonal bipyramidal (TBP) geometry with three equatorial phenyl groups eclipsing the axial Si-H/Si-F bonds. The Si-H[dot dot dot]K distances, along with DFT calculations on 1, indicate an electrostatic interaction that does not dictate the geometry adopted by the anion. A [H2SiOiPr3](-) salt (7) has also been crystallised in the same way; X-ray diffraction shows in this case a distorted TBP array with axial hydride ligands, and both Si-H[...]K and Si-O[...]K interactions. 1H NMR exchange experiments show 1 to undergo facile hydride exchange with Ph3SiH. Compound 1 acts as a good hydride transfer reagent to a variety of substrates, but its high reactivity often results in redistribution and other side reactions.     

Thermal decomposition of monocalcium aluminate decahydrate (CaAl2O4.10H2O) investigated by in-situ synchrotron X-ray powder diffraction, thermal analysis and 27Al, 2H MAS NMR spectroscopy

The stability of monocalcium aluminate decahydrate, with the nominal composition CaAl(2)O(4).10H(2)O (CAH(10)), has a decisive role for the strength development and durability of cementitious materials based on high alumina cements. This has prompted an investigation of the thermal transformation of crystalline monocalcium aluminate decahydrate in air to an amorphous phase by in-situ synchrotron X-ray powder diffraction in the temperature range from 25 to 500 degrees C, by DTA/TGA, and (2)H, (27)Al MAS NMR spectroscopy. The decomposition includes the loss of hydrogen-bonded water molecules in the temperature range up to 175 degrees C, coupled with a reduction of the unit cell volume from 1928 A(3) at 25 degrees C, to 1674 A(3) at 185 degrees C. Furthermore, X-ray diffraction shows that CaAl(2)O(4).10H(2)O starts to transform to an amorphous phase at approximately 65 degrees C. This phase is fully developed at approximately 175 degrees C and it converts to crystalline CaAl(2)O(4) when heated to 1300 degrees C. The thermal decomposition in the temperature range from approximately 65 to approximately 175 degrees C involves both formation of an amorphous phase including AlO(4) tetrahedra and structural changes in the remaining crystalline phase.     

Polycaprolactone solution–based ink for designing microfluidic channels on paper via 3D printing platform for biosensing application

This work reports a novel fabrication technique for development of channels on paper‐based microfluidic devices using the syringe module of a 3D printing syringe–based system. In this study, printing using polycaprolactone (PCL)‐based ink (Mw 70 000‐90 000) was employed for the generation of functional hydrophobic barriers on Whatman qualitative filter paper grade 1 (approximate thickness of 180 μm and pore diameter of 11 μm), which would effectively channelize fluid flow to multiple assay zones dedicated for different analyte detection on a microfluidic paper‐based analytical device (μPAD). The standardization studies reveal that a functional hydrophilic channel for sample conduction fabricated using the reported technique can be as narrow as 460.7 ± 20 μm and a functional hydrophobic barrier can be of any width with a lower limit of about 982.2 ± 142.75 μm when a minimum number of two layers of the ink is extruded onto paper. A comparison with the hydrodynamic model established for writing with ink is used to explain the width of the line printed by this system. A fluid flow analysis through a single channel system was also carried out to establish its conformity with the Washburn model, which governs the fluid flow in two‐dimensional μPAD. The presented fabrication technique proves to be a robust strategy that effectively taps the advantages of this 3D printing technique in the production of μPADs with enhanced speed and reproducibility.     

Improved Acid Resistance of a Metal–Organic Cage Enables Cargo Release and Exchange between Hosts

The use of di(2-pyridyl)ketone in subcomponent self-assembly is introduced. When combined with a flexible triamine and zinc bis(trifluoromethanesulfonyl)imide, this ketone formed a new Zn₄L₄ tetrahedron 1 bearing twelve uncoordinated pyridyl units around its metal-ion vertices. The acid stability of 1 was found to be greater than that of the analogous tetrahedron 2 built from 2-formylpyridine. Intriguingly, the peripheral presence of additional pyridine rings in 1 resulted in distinct guest binding behavior from that of 2 , affecting guest scope as well as binding affinities. The different stabilities and guest affinities of capsules 1 and 2 enabled the design of systems whereby different cargoes could be moved between cages using acid and base as chemical stimuli.     

Unconventional Secondary Structure Mimics: Ladder-Rungs

Secondary structures tend to be recognizable because they have repeating structural motifs, but mimicry of these does not have to follow such well-defined patterns. Bioinformatics studies to match side-chain orientations of a novel hydantoin triazole chemotype ( 1 ) to protein-protein interfaces revealed it tends to align well across parallel and antiparallel sheets, like rungs on a ladder. One set of these overlays was observed for the protein-protein interaction uPA⋅uPAR. Consequently, chemotype 1 was made with appropriate side-chains to mimic uPA at this interface. Biophysical assays indicate these compounds did in fact bind uPAR, and elicit cellular responses that affected invasion, migration, and wound healing.     

X-Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A2A Adenosine Receptor Antagonists

We present a robust protocol based on iterations of free energy perturbation (FEP) calculations, chemical synthesis, biophysical mapping and X-ray crystallography to reveal the binding mode of an antagonist series to the A_2A adenosine receptor (AR). Eight A_2AAR binding site mutations from biophysical mapping experiments were initially analyzed with sidechain FEP simulations, performed on alternate binding modes. The results distinctively supported one binding mode, which was subsequently used to design new chromone derivatives. Their affinities for the A_2AAR were experimentally determined and investigated through a cycle of ligand-FEP calculations, validating the binding orientation of the different chemical substituents proposed. Subsequent X-ray crystallography of the A_2AAR with a low and a high affinity chromone derivative confirmed the predicted binding orientation. The new molecules and structures here reported were driven by free energy calculations, and provide new insights on antagonist binding to the A_2AAR, an emerging target in immuno-oncology.     

Simultaneous Detection of Carbon Monoxide and Viscosity Changes in Cells

A new family of robust, non-toxic, water-compatible ruthenium(II) vinyl probes allows the rapid, selective and sensitive detection of endogenous carbon monoxide (CO) in live mammalian cells under normoxic and hypoxic conditions. Uniquely, these probes incorporate a viscosity-sensitive BODIPY fluorophore that allows the measurement of microscopic viscosity in live cells via fluorescence lifetime imaging microscopy (FLIM) while also monitoring CO levels. This is the first example of a probe that can simultaneously detect CO alongside small viscosity changes in organelles of live cells.     

Copper Bis(oxazoline)-Catalyzed Enantioselective Alkynylation of Benzopyrylium Ions

The stereocontrolled construction of biologically relevant chromanones and tetrahydroxanthones has been achieved through the addition of alkynes to benzopyrylium trilfates under the influence of copper bis(oxazoline) catalysis. Excellent levels of enantiocontrol (63–98 % ee) are achieved in the addition of a variety of alkynes to an array of chromenones with a hydrogen in the 2-position. Promising levels of enantiocontrol (54–67 % ee) are achieved in the alkynylation of chromenones with esters in the 2-position, generating tertiary ether stereocenters resembling those frequently found in naturally occurring metabolites.