High resolution spectroscopy of (lambda)(12)B by electroproduction

An experiment measuring electroproduction of hypernuclei has been performed in hall A at Jefferson Lab on a 12C target. In order to increase counting rates and provide unambiguous kaon identification two superconducting septum magnets and a ring imaging Cherenkov detector were added to the hall A standard equipment. An unprecedented energy resolution of less than 700 keV FWHM has been achieved. Thus, the observed (Lambda)(12)B spectrum shows for the first time identifiable strength in the core-excited region between the ground-state s-wave Lambda peak and the 11 MeV p-wave Lambda peak.     

Surfactant-mediated growth revisited

The x-ray structure analysis of the oxygen-surfactant-mediated growth of Ni on Cu(001) identifies up to 0.15 monolayers of oxygen in subsurface octahedral sites. This questions the validity of the general view that surfactant oxygen floats on top of the growing Ni film. Rather, the surfactant action is ascribed to an oxygen-enriched zone extending over the two topmost layers. Surface stress measurements support this finding. Our results have important implications for the microscopic understanding of surfactant-mediated growth and the change of the magnetic anisotropy of the Ni films.     

Organocatalysis: quantum chemical modeling of nucleophilic addition to α,β‐unsaturated carbonyl compounds

One of the successful transformations within the field of organocatalysis, the organocatalytic asymmetric addition of nitromethane to α,β‐unsaturated aldehydes and ketones, has been studied by quantum chemical modeling. The level of accuracy of the hybrid density functional theory method B3LYP/6‐31G(d) was compared to a high level ab initio benchmark for this reaction. It is concluded that B3LYP/6‐31G(d) performs very well for this reaction type, giving good estimates of critical energies. The reaction between acrolein and nitromethane was studied in detail. The reaction mechanism revealed an intermediate oxazolidin structure, which is currently unknown. Alkyl substitution in various positions on the amine catalyst or α,β‐unsaturated carbonyl compound influences the reactivity in a predictive fashion. The iminium ion, prop‐2‐en‐iminium, is less activated towards nucleophilic attack compared to protonated acrolein. Copyright © 2007 John Wiley & Sons, Ltd.     

The effects of unequal diffusion coefficients on periodic travelling waves in oscillatory reaction-diffusion systems

Many oscillatory biological systems show periodic travelling waves. These are often modelled using coupled reaction-diffusion equations. However, the effects of different movement rates (diffusion coefficients) of the interacting components on the predictions of these equations are largely unknown. Here we investigate the ways in which varying the diffusion coefficients in such equations alters the wave speed, time period, wavelength, amplitude and stability of periodic wave solutions. We focus on two sets of kinetics that are commonly used in ecological applications: lambda-omega equations, which are the normal form of an oscillatory coupled reaction-diffusion system close to a supercritical Hopf bifurcation, and a standard predator-prey model. Our results show that changing the ratio of the diffusion coefficients can significantly alter the shape of the one-parameter family of periodic travelling wave solutions. The position of the boundary between stable and unstable waves also depends on the ratio of the diffusion coefficients: in all cases, stability changes through an Eckhaus (‘sideband’) instability. These effects are always symmetrical in the two diffusion coefficients for the lambda-omega equations, but are asymmetric in the predator-prey equations, especially when the limit cycle of the kinetics is of large amplitude. In particular, there are two separate regions of stable waves in the travelling wave family for some parameter values in the predator-prey scenario. Our results also show the existence of a one-parameter family of travelling waves, but not necessarily a Hopf bifurcation, for all values of the diffusion coefficients. Simulations of the full partial differential equations reveals that varying the ratio of the diffusion coefficients can significantly change the properties of periodic travelling waves that arise from particular wave generation mechanisms, and our analysis of the travelling wave families assists in the understanding of these effects.     

Evaporative Preconcentration of Fluorescent Protein Samples in Capillary Based Microplates

The preconcentration of analytes is important in biochemical analysis as it offers the ability to detect for trace species, and increase signal-to-noise ratios when using optical sensing on fluorophores. A strong advantage of the evaporation technique lies in its ability to operate without the need of any energy source; albeit major challenges exist on how to increase the surface area exposure to air for heightened evaporation, ensure no further increases once specified analyte concentrations have been achieved, and not needing any intervening membranes. We demonstrate here that the droplet creation and retraction approach in capillary based microplates offers such abilities whilst at the same time facilitating mixing.     

Control of resonant peak depths of tunable long-period fiber gratings using overcoupling

We present a method to reduce changes in the resonant peak depth of a long-period fiber grating (LPFG) as the resonant band is tuned by varying the external refractive index. We theoretically analyze the effects of the initial coupling strength on the peak depth change as external refractive index is varied. By controlling the initial coupling strength, it is experimentally demonstrated that an optimum peak depth can be obtained over a range of operating wavelengths that will maximize the sensitivity and stability of LPFG based sensors and tunable filters.     

Towards a programmable magnetic bead microarray in a microfluidic channel

A new hybrid magnetic bead separator that combines an external magnetic field with 175 μm thick current lines buried in the back side of a silicon wafer is presented. A microfluidic channel was etched into the front side of the wafer. The large cross-section of the current lines makes it possible to use larger currents and obtain forces of longer range than from thin current lines at a given power limit. Guiding of magnetic beads in the hybrid magnetic separator and the construction of a programmable microarray of magnetic beads in the microfluidic channel by hydrodynamic focusing is presented.     

Friction tensor for a pair of Brownian particles: Spurious finite-size effects and molecular dynamics estimates

In this work, we show thatin any finite system, the binary friction tensor for two Brownian particlescannot be directly estimated from an evaluation of the microscopic Green-Kubo formula, involving the time integral of force-force autocorrelation functions. This pitfall is associated with a subtle inversion of the thermodynamic and long-time limits and leads to spurious results for the estimates of the friction matrix based on molecular dynamics simulations. Starting from a careful analysis of the coupled Langevin equations for two interacting Brownian particles, we derive a method to circumvent these effects and extract the binary friction tensor from the correlation function matrix of the instantaneous forces exerted by the bath particles on the fixed Brownian particles, and from the relaxation of the total momentum of the bath in afinite system. The general methodology is applied to the case of two hard or soft Brownian spheres in a bath of light particles. Numerical estimates of the relevant correlation functions and of the resulting self and mutual components of the matrix of friction tensors are obtained by molecular dynamics simulations for various spacings between the Brownian particles. This paper is dedicated to B. Jancovici on the occassion of his 65th birthday.     

Acetylene on Cu(111): imaging a molecular surface arrangement with a constantly rearranging tip

Acetylene on Cu(111) is investigated by scanning tunnelling microscopy (STM); a surface pattern previously derived from diffraction measurements can be validated, if the variation of the STM image transfer function through absorption of an acetylene molecule onto the tip apex is taken into account. Density functional theory simulations point to a balance between short-range repulsive interactions of acetylene/Cu(111) associated with surface stress and longer range attractive interactions as the origin of the ordering.