Electron transfer dissociation of peptide anions

Ion/ion reactions of multiply deprotonated peptide anions with xenon radical cations result in electron abstraction to generate charge-reduced peptide anions containing a free-radical site. Peptide backbone cleavage then occurs by hydrogen radical abstraction from a backbone amide N to facilitate cleavage of the adjacent C-C bond, thereby producing a- and x-type product ions. Introduction of free-radical sites to multiply charged peptides allows access to new fragmentation pathways that are otherwise too costly (e. g., lowers activation energies). Further, ion/ion chemistry, namely electron transfer reactions, presents a rapid and efficient means of generating odd-electron multiply charged peptides; these reactions can be used for studying gas-phase chemistries and for peptide sequence analysis.     

Immobilization of amyloglucosidase using two forms of polyurethane polymer

Amyloglucosidase was covalently immobilized using two hydrophilic prepolymers: Hypol FHP 2002 (creates foams) and Hypol FHP 8190H (creates gels). The foamable prepolymer was superior as a support for enzyme immobilization. The percent activity immobilized in the polyurethane foams was 25 +/- 1.5%. Large substrates (greater than 200,000 daltons in mol wt) were hydrolyzed as effectively as smaller ones by the immobilized enzyme. The Km value of the foam-immobilized enzyme increased from 0.76 mg/mL (free) to 0.86 mg/mL (immobilized), whereas the Vmax dropped from 90.9 (free) to 12.4 nmol glucose/min/mL (immobilized). The long-term (2 mo) storage stability of amyloglucosidase was enhanced by immobilization in foams (70% activity retained; free enzyme only retained 50%). Immobilization also improved the enzyme stability to various denaturing agents (sodium chloride, urea, and ethanol). The immobilized enzyme exhibited increased stability compared to the free enzyme at high temperatures (95 degrees C). Both glycogen and starch could be utilized by the immobilized enzyme, indicating that this technique could prove useful for starch hydrolysis.     

Mechanisms of decomposition of mixtures of ethyl acetate and isopropyl bromide subjected to pulsed infrared laser irradiation

The infrared laser induced decomposition of mixtures of ethyl acetate and isopropyl bromide has been studied. The ratio of the yields of products ethylene and propylene, arising from the unimolecular decomposition reactions: ethyl acetate → ethylene + acetic acid, and isopropyl bromide → propylene + hydrogen bromide, were measured as a function of the ratio of ethyl acetate to isopropyl bromide and pressure of added helium. The results indicate clearly that in these systems non-equilibrium behavior is found up to the highest pressures used (about one atmosphere). A two level kinetic model is suggested which qualitatively explains the observations.     

Synthesis,Characterization, Luminescence,and Electrochemistry of the Tetranuclear Gold(I) Amidinate Clusters,Precursors to CO Oxidation Catalysts: Au4[(ArNC(H)NAr)]4, Au4[(PhNC(Ph)NPh)]4 and Au4[PhNC(CH3)NPh)4]

A summary of the chemistry of the tetranuclear Au(I) amidinate complexes is presented. Tetranuclear Au(I) amidinate clusters are produced by the reaction of the sodium salt of a amidine ligand with the gold precursor Au(THT)Cl in a (1:1) stoichiometry. The structures of the tetranuclear Au₄[ArNC(H)NAr]₄, Ar = C₆H₄‐4‐OMe, C₆H₃‐3,5‐Cl, C₆H₄‐4‐Me, C₆H₄‐3‐CF₃, C₆F₅, C₁₀H₇ and the tetranuclear Au₄[(PhNC(Ph)NPh]₄ and Au₄[PhNC(CH₃)NPh]₄ have been characterized by X‐ray crystallography. The average Au···Au distance between adjacent Au(I) atoms is ?3.0 Å, typical of compounds having an aurophilic interaction. The four gold atoms are located at the corner of a rhomboid with the amidinate ligands bridged above and below the near plane of the four Au(I) atoms. The angles at Au···Au···Au in the cyclic units are between 70° and 116°. The tetranuclear gold(I) amidinate clusters each show different luminescence behavior. The tetranuclear clusters Au₄[(ArNC(H)NAr]₄, Ar = C₆H₄‐4‐OMe, Ar = C₆H₄‐3‐CF₃, Ar = C₆H₄‐4‐Me and Ar = C₆H₄‐3,5‐Cl are the first tetranuclear gold(I) cluster species from group 11 elements that show fluorescence at room temperature. The tetranuclear naphthyl derivative Ar = C₁₀H₇ is luminescent only at 77 K. The pentafluorophenyl derivative Ar = C₆F₅ does not show any photoluminescence in the solid state nor in the solution. The lifetimes of the naphthyl and trifluoromethylphenyl complexes are in the millisecond range indicating phosphorescent processes. Electrochemical and chemical oxidation studies of the tetranuclear Au(I) amidinate clusters are presented. The tetranuclear complexes Au₄[ArNC(H)NAr]₄, Ar = C₆H₄‐4‐OMe, Ar = C₆H₄‐4‐Me, and Ar = C₆H₃‐3,5‐Cl, show three reversible waves at 0.75, 0.95, 1.09 V vs. Ag/AgCl at a scan rate of 500 mV/s in 0.1 M Bu₄NPF₆/CH₂Cl₂ at a Pt working electrode in CH₂Cl₂. Three reversible waves at 0.87, 1.19, 1.42 V vs. Ag/AgCl at a scan rate of 100 mV/s are also observed for the tetranuclear complex Au₄[PhNC(Ph)NPh]₄ in CH₂Cl₂. The pentafluorophenyl amidinate derivative, Au₄[ArNC(H)NAr]₄, Ar = C₆F₅ shows no oxidation wave below 1.8 V. Recently it has been shown that Au₄[ArNC(H)NAr]₄ is a very effective catalyst precursor for room temperature CO oxidation.     

Synthesis, Characterization, and Physical Properties of Two Trinuclear, Mixed-Valence Species of Type [μ3-OMnIIMnIII 2(O2CCF3)6(R)3] (R=H2O, CH3COOH)

The preparation and characterization of two new mixed-valence, trinuclear species, [Mn₃O(O₂CCF₃)₆(H₂O)₃]CF₃COOH4/3H₂O (1) and [Mn₃O(O₂CCF₃)₆(CH₃COOH)₃] (2), is reported. Compound 1 crystallizes in the triclinic space group, P¯1 (No. 2), with the parameters, a=12.3131(9) Å, b=12.4427(9) Å, c=12.965(1) Å, =72.593(4)°, =73.453(5)°, =68.345(4)°, V=1727.2(2) ų, and Z=2. A total of 14060 reflections were collected in the range 1.6827.52°. The final weighted and non-weighted agreement indices, R1=0.0589 and wR2=0.1445 were based on a total of 6953 unique reflections with an R _int value of 0.0542. Compound 2 crystallizes in the monoclinic space group, P2₁/n (No. 14), with the parameters, a=12.876(3) Å, b=12.212(4) Å, c=17.732(4) Å, =100.40(3)°, V=3640.4(1) ų, and Z=4. A total of 32197 reflections were collected in the range 1.7227.13°. The final weighted and non-weighted agreement factors, R1=0.0647 and wR2=0.1609 were based on a total of 8018 unique reflections with an R _int value of 0.0462. An investigation of the physical properties revealed that both compounds display an intermediate ground state of S=3/2 as a consequence of intramolecular antiferromagnetic coupling. The magnetic data for compound 1 was best fit to the parameters g=2.09, J=–5.5 cm^–1, J=–3.4 cm^–1, and D _Mn(III)=–4.5 cm^–1; the data for compound 2 was best fit to the parameters g=2.10, J=–2.9 cm^–1, J=–5.5 cm^–1, and D _Mn(III)=–4.5 cm^–1.     

Biosynthesis of anthecotuloide,an irregular sesquiterpene lactone from Anthemis cotula L. (Asteraceae) via a non-farnesyl diphosphate route

Retrobiosynthetic analysis of the allergenic sesquiterpene lactone, anthecotuloide, suggested that this natural product could be formed either by head to head condensation of geranyl diphosphate with dimethylallyl diphosphate, or from farnesyl diphosphate (FPP), the accepted regular sesquiterpene precursor via the rearrangement of a germacranolide precursor. Isotopic labelling of anthecotuloide has now been achieved by feeding [1-(13)C]-glucose, [U-13C6]-glucose and [6,6-(2)H2]-glucose to aseptically grown plantlets of Anthemis cotula(family Asteraceae). Analysis of labelling patterns and absolute 13C abundances using quantitative 13C NMR spectroscopy showed that the isoprene building blocks of this sesquiterpene are formed exclusively via the MEP terpene biosynthetic pathway. This was supported by results from an experiment using [U-13C6]-glucose. A deuterium labelling experiment using [6,6-(2)H2]-glucose supported the original proposal and showed that anthecotuloide is formed from a non FPP precursor. Isotope ratio mass spectrometry suggested that there were two pathways for sesquiterpene biosynthesis in A. cotula.     

Strategy for the study of paramagnetic proteins with slow electronic relaxation rates by nmr spectroscopy: application to oxidized human [2Fe-2S] ferredoxin

NMR studies of paramagnetic proteins are hampered by the rapid relaxation of nuclei near the paramagnetic center, which prevents the application of conventional methods to investigations of the most interesting regions of such molecules. This problem is particularly acute in systems with slow electronic relaxation rates. We present a strategy that can be used with a protein with slow electronic relaxation to identify and assign resonances from nuclei near the paramagnetic center. Oxidized human [2Fe-2S] ferredoxin (adrenodoxin) was used to test the approach. The strategy involves six steps: (1) NMR signals from (1)H, (13)C, and (15)N nuclei unaffected or minimally affected by paramagnetic effects are assigned by standard multinuclear two- and three-dimensional (2D and 3D) spectroscopic methods with protein samples labeled uniformly with (13)C and (15)N. (2) The very broad, hyperfine-shifted signals from carbons in the residues that ligate the metal center are classified by amino acid and atom type by selective (13)C labeling and one-dimensional (1D) (13)C NMR spectroscopy. (3) Spin systems involving carbons near the paramagnetic center that are broadened but not hyperfine-shifted are elucidated by (13)C[(13)C] constant time correlation spectroscopy (CT-COSY). (4) Signals from amide nitrogens affected by the paramagnetic center are assigned to amino acid type by selective (15)N labeling and 1D (15)N NMR spectroscopy. (5) Sequence-specific assignments of these carbon and nitrogen signals are determined by 1D (13)C[(15)N] difference decoupling experiments. (6) Signals from (1)H nuclei in these spin systems are assigned by paramagnetic-optimized 2D and 3D (1)H[(13)C] experiments. For oxidized human ferredoxin, this strategy led to assignments (to amino acid and atom type) for 88% of the carbons in the [2Fe-2S] cluster-binding loops (residues 43-58 and 89-94). These included complete carbon spin-system assignments for eight of the 22 residues and partial assignments for each of the others. Sequence-specific assignments were determined for the backbone (15)N signals from nine of the 22 residues and ambiguous assignments for five of the others.     

Fabrication of polyelectrolyte multilayer films comprising nanoblended layers

Polyelectrolyte multilayer thin films were prepared via the alternate deposition of poly(allylamine hydrochloride) (PAH) and a blend of poly(acrylic acid) (PAA) and poly(styrenesulfonate) (PSS). When the pH of the blend solution was 3.5, the presence of PAA in this solution significantly increased the total film thickness. With only 10 wt % PAA in the blend adsorption solution, a large increase in film thickness was observed (92 nm cf. 18 nm). It was also demonstrated that the total amount of PSS adsorbed was enhanced by the presence of PAA in the blend solution, showing that the blend solution composition influenced that of the multilayer films. Thin films prepared with nanoblended layers also showed improved pH stability, because they exhibited reduced film rearrangement upon exposure to acidic conditions (pH = 2.5).     

Amaryllidaceae,sceletium, imidazole,oxazole, thiazole,peptide and miscellaneous alkaloids

This review covers alkaloids classified in the plant families Amaryallidaceae and Sceletium. In addition alkaloids possessing imidazole, oxazole and thiazole structures are listed followed by alkaloids possessing peptide linkages. Finally miscellaneous alkaloids include those compounds found naturally which cannot be classified into known groups; a relative Pandora's box. A total of 620 structures has been reviewed from 218 references found in the literature for the period July 1999 to June 2000.