pH sensitivity of Si--C linked organic monolayers on crystalline silicon surfaces.

The electrochemical behavior of Si--C linked organic monolayers is studied in electrolyte-insulator-Si devices, under conditions normally encountered in potentiometric biosensors, to gain fundamental knowledge on the behavior of such Si electrodes under practical conditions. This is done via titration experiments, Mott-Schottky data analysis, and data fitting using a site-binding model. The results are compared with those of native SiO(2) layers and native SiO(2) layers modified with hexamethyldisilazane. All samples display pH sensitivity. The number of Si--OH groups on the alkylated samples is calculated to be less than 0.7 % of that of a pure SiO(2) insulator, which still causes a pH sensitivity of approximately 25 mV per pH unit in the pH range: 4-7. The alkylated samples hardly suffer from response changes during up- and down-going titrations, which indicates that very little oxide is additionally formed during the measurements. The pK(a) values of all samples with monolayers (4.0-4.4) are lower than that of native SiO(2) (6.0). The long-term drift (of approximately 1 mV h(-1)) is moderate. The results indicate that biosensors composed of alkylated Si substrates are feasible if a cross-sensitivity towards pH in the sensor signal is taken into account.     

Comparison of a pump-around, a diffusion-driven, and a shear-driven system for the hybridization of mouse lung and testis total RNA on microarrays

In the present study, we demonstrate the benefits of a shear-driven rotating microchamber system for the enhancement of microarray hybridizations, by comparing the system with two commonly used hybridization techniques: purely diffusion-driven hybridization under coverslip and hybridization using a fully automated hybridization station, in which the sample is pumped in an oscillating manner. Starting from the same amount of DNA for the three different methods, a series of hybridization experiments using mouse lung and testis DNA is presented to demonstrate these benefits. The gain observed using the rotating microchamber is large: both in terms of analysis speed (up to tenfold increase) and in final spot intensity (up to sixfold increase). The gain is due to the combined effect of the hybridization chamber miniaturization (leading to a sample concentration increase if comparing iso-mass conditions) and the transport enhancement originating from the rotational shear-driven flow induced by the rotation of the chamber bottom wall.     

CAROTENOID-TO-BACTERIOCHLOROPHYLL SINGLET ENERGY TRANSFER IN CAROTENOID-INCORPORATED B850 LIGHT-HARVESTING COMPLEXES OF Rhodobacter sphaeroides R-26.1

Four carotenoids, 3,4,7,8-tetrahydrospheroidene, 3,4,5,6-tetrahydrospheroidene, 3,4-dihydrospheroidene and spheroidene, have been incorporated into the B850 light-harvesting complex of the carotenoidless mutant, photosynthetic bacterium, Rhodobacter sphaeroides R-26.1. The extent of π-electron conjugation in these molecules increases from 7 to 10 carbon-carbon double bonds. Carotenoid-to-bacteriochlorophyll singlet state energy transfer efficiencies were measured using steady-state fluorescence excitation spectroscopy to be 54 ± 2%, 66 ± 4%, 71 ± 6% and 56 ± 3% for the carotenoid series. These results are discussed with respect to the position of the energy levels and the magnitude of spectral overlap between the S, (2′AJ state emission from the isolated carotenoids and the bacteriochlorophyll absorption of the native complex. These studies provide a systematic approach to exploring the effect of excited state energies, spectral overlap and excited state lifetimes on the efficiencies of carotenoid-to-bacteriochlorophyll singlet energy transfer in photosynthetic systems.     

Transport studies in boron-ion implanted type II<Emphasis Type="Italic">a</Emphasis> diamond

We have investigated low-temperature electrical transport mechanisms in the surface layer of a type IIa diamond which has been heavily implanted with boron-ions at low temperatures and then annealed at high temperatures. The boron atoms occupy substitutional sites giving rise to a heavily doped wide-bandgap semiconductor. The dc-conductivity results suggest that for the maximum boron doping that has been achieved, the diamond sample is close to the insulator-metal transition. A model to account for the observed increase in activated boron centres with ion dose is presented. On the insulating side of the transition, the data are interpreted in terms of variable-range hopping laws.     

Separately harmonic and subharmonic functions

Let u(x, y) be defined in B ₁×B ₂ where B ₁ ^m and B ₂ ⁿ , and assume that u(x, ·) harmonic for every fixed x and u(·, y) is subharmonic for every fixed y. We show that if u(·, y) is, in addition, C ² for each y then u is subharmonic in B ₁×B ₂ in both variables jointly.     

At-column injector for capillary GC — design and evaluation

The present paper describes constructional details and evaluations of an at-column injector for capillary GC. Injections were made via a sample loop on a 0.32 mm i.d. capillary column. Two rotary valves were employed to allow a wash of the sample loop and a backflush of the transfer line. Repeatability, calculated from absolute area counts for n-alkanes was between 0.3–1% RSD, for injected sample volumes between 5 and 100 μl. Promising results were also obtained with syringe-based injections on narrow bore (100 μ i.d.) columns. Repeatability on the basis of normalized area counts was in the order of 0.1–0.2% RSD, while solvent tailing was practically absent.     

Palladium-catalyzed Heck reactions of styrene derivatives and 2-iodo-p-carborane

p-Carborane has been vinylated on the 2-B-atom in high yields using the Heck reaction. Thus, the reaction between 2-iodo-p-carborane and various styrenes [4-H-, 4-C(6)H(4)-, 4-Cl-, 4-Br-, 4-NO(2)-, 4-CH(3)O-, and 4-CH(3)-] resulted in the production of the corresponding trans-beta-(2-B-p-carboranyl)styrene in DMF solution when reacted in the presence of silver phosphate and the palladacycle Herrmann's catalyst.     

The role of charge-site location in fragmenting ions. 1—[CH3 CHXCOOCH3]+˙ and [CH2XCH2 COOCH3]+˙ ions and the structures of daughter ions derived from the loss of X (X = I,Br, Cl and CH3)

The structures of the m/z 87, [C₄H₇O₂]⁺, ions generated by dissociative ionization of CH₃CGXCOOCH₃ and XCH₂CH₂COOCH₃ (X = CH₃, Cl, Br, and I) have been investigated via their unimolecular and collisionally activated fragmentations and by apperance energy measurements. For both precursors loss of X = CH₃ produced, via H atom transfer, ions of structure \documentclass{article}\pagestyle{empty}\begin{document}$ {\rm CH_2 = CH}\mathop {\rm C}\limits^{\rm + } \left({{\rm OH}} \right){\rm OCH}_{\rm 3} $\end{document} (a), ΔH_f = 386 kj mol^?1. In marked contrast, loss of I^˙ from ionized CH₃CHICOOCH₃ and ICH₂CH₂COOCH₃ proceeded without rearrangement to yield respectively ions of structure \documentclass{article}\pagestyle{empty}\begin{document}$ {\rm CH_3}\mathop {\rm C}\limits^{\rm + } {{\rm HCOOCH_3}} $\end{document} (b), ΔH_f = 480 kJ mol^?1 and (c), ΔH_f = 450 kJ mol^?1. These different fragmentation behaviours are explained via photoelectron spectra which show that the formal charge site in the precursor ion is at the carbonyl oxygen when X = CH₃ but at the halogen atom when X = I. The precursor molecules X = Cl and Br display both of the above characteristics, CH₃CHXCOOCH₃ yielding mixtures of a and b and XCH₂CH₂COOCH₃ producing a and c ions.     

Pimaricin—VIII : Structural and configurational studies by electron impact and field desorption mass spectrometry, 13C (25.2MHz) and 1H (270 MHz)-NMR spectroscopy

Attempts to obtain a molecular ion from the polyene macrolide antibiotic pimaricin by EI and FD mass spectrometry were unsuccessful The loss of carbon dioxide and a varying number of water molecules from the molecular ion made a molecular-weight determination impossible ¹³C NMR spectroscopy of N-acetylpimaricin, its dodecahydroderivative, and of HH-2, a hydrogenation-hydrogenolysis product of N-acetylpimaricin, confirmed that the antibiotic has structure 3 containing a hemi-ketalic ring and lacking an OH group at C-8. The value of the anomeric coupling constant, J_c-1-h-1, indicates that the mycosamine moiety is β-glycosidically bound to the aglycone.The structure and configuration of the antibiotic have been studied by analysis of the 270 MHz ¹H-NMR spectra of N acetylpimaricin and HH-2. By comparison of the two spectra and by extensive decoupling experiments, all signals in the spectrum of N-acetylpimaricin have been assigned to the protons in structure 3. From chemical-shift, coupling constant, and integral values, it was deduced that the mycosamine ring is pyranoid with a chair conformation, the hemi-ketal is 6 membered and occupies a chair conformation with the substituents in equatorial positions, the epoxy protons as well as the olefinic protons are trans to each other, and the antibiotic is diastereomerically pure.