Design and parallel solid-phase synthesis of ring-fused 2-pyridinones that target pilus biogenesis in pathogenic bacteria

A new method for the solid-phase synthesis of enantiomerically enriched highly substituted ring-fused 2-pyridinones 13 has been developed. The synthesis mediates introduction of substituents at two positions in the 2-pyridinone ring in a diverse manner and is suitable for parallel synthesis. (19)F NMR spectroscopy was used as a tool to monitor each of the five steps in the reaction sequence. The optimized conditions thus obtained were then used to prepare a library of 20 2-pyridinones with high yields. The library members were chosen from a statistical multivariate design to ensure diversity and reliable data for structure-activity relationships. Screening of the library against the bacterial periplasmic chaperone PapD was performed using surface plasmon resonance. Three new 2-pyridinones with a higher affinity for the chaperone PapD than the previous best 13[10,1] were found, and important structural features could be deduced.     

BIOCHEMICAL FACTORS AFFECTING THE QUANTUM EFFICIENCY OF HYDROGEN PRODUCTION BY MEMBRANES OF GREEN PHOTOSYNTHETIC BACTERIA*

Abstract— Photohydrogen production, 200-700 μmol H₂ h^?1 (mg bacteriochlorophyll a)^?1 has been obtained in a system containing unit membrane vesicles (Complex I) from the green photosynthetic bacterium Chiorobium limicola f. thiosulfatophilum, ascorbate, N,N,N′,N′-tetramethyl-p-phenylene-diamine, dithioerythritol, an oxygen scavenging mixture, either methyl viologen (MV) or clostridial ferredoxin (CPS Fd) as electron carrier, and either CPS hydrogenase or platinum asbestos as catalyst. All components are necessary for maximum activity, and spinach Fd cannot be substituted for CPS Fd. Higher rates of photohydrogen production are obtained using MV or CPS Fd with hydrogenase than with MV and Pt asbestos. The highest quantum efficiencies (7–10% at 0.2–0.9 mW absorbed light and over 20% at lower light) were obtained with CPS Fd, hydrogenase and non-saturating 812 nm light. With saturating white light, however, rates of photohydrogen production varied relatively little among the various combinations of electron carrier and catalyst tested. The reaction rate is unaffected by 0.03% Triton X-100, and is insensitive to treatment with antimycin a or m-chloro-carbonyl cyanide phenylhydrazone. This indicates that neither electron flow through an endogenous cyclic chain, nor maintenance of a proton gradient are involved in this process.     

The ring-closing metathesis of vinyl ethers with Grubbs'' catalyst for the synthesis of dihydropyrans

A series of acyclic vinyl ethers have been prepared and treated with Grubbs' ruthenium catalyst ((Cy₃P)₂RuCl₂=CHPh). Contrary to previous findings, it has been shown that certain vinyl ethers are excellent substrates for the ring closing metathesis with ruthenium based catalysts.     

Copper ring-disk microelectrodes: fabrication, characterization, and application as an amperometric detector for capillary columns

A novel approach to the fabrication of metal ring-disk (RD) microelectrodes is presented that employs flexible chemical vapor deposition (CVD) and electrode modification techniques. Specifically, the development of a copper ring-disk microelectrode is described utilizing a combination of CVD coating, electroetching, and electroplating. Initially, a 25 μm diameter tungsten wire is concentrically coated by CVD with an insulating layer of silica, a layer of tungsten metal, and finally, a second outer layer of silica. The copper surface was prepared by first creating micrometer cavities by electrochemical etching the tungsten in hydroxide solutions followed by electrodeposition of copper from aqueous solutions of Cu(II). Each step of the process was characterized by scanning electron microscopy, optical microscopy, and cyclic voltammetry, demonstrating the preparation of a viable metal-based dual ring-disk microelectrode system. For the purpose of demonstrating the concept of introducing specific selectivity into the device, amperometric detection of galactose in 0.1 M NaOH was performed at +0.60 V in bulk solution and after flow injection analysis in a capillary column.     

Macromlecular engineering of polylactones and polylactides. XVI. On the way to the synthesis of ω-aliphatic primary amine poly (ϵ-caprolactone) and polylactides

Since bromides are well-known precursors of primary amines, diethylaluminum 12 bromo-1-dodecyl oxide has been prepared and used as an initiator for the ring-opening polymerization of ?-caprolactone and L-lactide. Uner strictly controlled conditions, the end-functionalization of the polyesters in quantitative and the bromo end-group is easily converted into an azide group whatever the polymeric backbone. The subsequent reduction of the azide into the expected primary amine has been investigated by catalytic transfer hydrogenation (CTH) in DMF and by hydrolysis in the presence of triphenylphosphine in THF, respectively.The hydrolysis reaction (PΦ₃/H₂O) is perturbed by a coupling reaction, which involves a protonate secondary amine and leads to a twofold increase in the polyester molecular weight. The CTH method gives rise to the expected ω-NH₂ poly (?-caprolactone), in contrast to polylactide which seems to be unstable toward the nascent amine end group. Whatever the polarity of the medium (DMF or THF), aminolysis of polylactides is observed to occur and leads to the formation of an internal amide. © 1994 John Wiley & Sons, Inc.     

Metabolic profiling of normal and hypertensive rat kidney tissues by hrMAS-NMR spectroscopy

Intact kidney tissue samples of normal and spontaneously hypertensive rats (SHRs) were analyzed by hrMAS-NMR spectroscopy and principal component analysis (PCA). Radial components (cortex, outer stripe of the outer medulla, inner stripe of the outer medulla, and papilla) were sampled from various regions across the kidney from multiple animals in order to establish inter- and intra-animal variability. The effects of temperature were also measured. Papilla was differentiated from the other tissue types, and this variation by tissue type was greater than the effect of temperature on the samples (spectra were compared from samples at 2 and 30 °C). This study also revealed long term stability issues of tissue storage at -80 °C. The PCA showed that the greatest differentiation between normal rats and SHRs was found in the cortex and the regions in the NMR spectra that were correlated with this variation were identified.Abbreviations hrMAS High-resolution magic angle spinning - NMR Nuclear magnetic resonance - PCA Principal component analysis - CSA Chemical shift anisotropy - DD Dipolar coupling - SHR Spontaneously hypertensive rat     

Polymerization and characterization of nitrile-terminated diacetylene materials

A family of nitrile-terminated diacetylene materials were synthesized. Samples were prepared in various forms and polymerization was performed photochemically and thermally. The resulting materials exhibited low molecular weights and were obtained in low yields. Although the diacetylene group had oligomerized, no evidence was found in support of ? C?N? chain formation. Thermochromism was exhibited by the irradiated 8-nitrile sample and a molecular interpretation of this chromic transition was discussed. Diffraction data implied that strong intermolecular interactions were present between adjacent nitrile groups in the low temperature phase. It is suggested that stresses are built up during polymerization which cause the low degree of polymerization and yield.     

A study of the thermal and light induced spin transition in [FeL2](BF4)2 and [FeL2](ClO4)2 L=2,6-di(3-methylpyrazol-1-yl)pyrazine

The spin crossover compounds [FeL2](BF4)2, L=2,6-di(3-methylpyrazol-1-yl)pyrazine and [FeL2](ClO4)2 have very unusual two stage spin transitions which are initially steep and then become more gradual. A detailed variable temperature single crystal X-ray diffraction study has shown that the course of the spin transition is controlled by an order-disorder transition in the counter anions. The high and low spin states both crystallise in the tetragonal space group I4, the structures of the high and low spin states are presented at 290 and 30 K, respectively. The title compounds are shown to undergo LIESST (Light Induced Excited Spin State Trapping) under irradiation with either red or green laser light with wavelengths of 632.8 and 532.06 nm, respectively, at 30 K. The cell parameters for the tetragonal photo-induced metastable high spin state at this temperature are a= 9.169(6), c= 17.77(1) A for [FeL2](ClO4)2 with an increase in unit cell volume of 21 A3, and a= 9.11(1), c= 17.75(2) A and an increase in volume of 42.8 A3 for [FeL2](BF4)2.     

A microchip-based proteolytic digestion system driven by electroosmotic pumping

Microchip-based proteomic analysis requires proteolytic digestion of proteins in microdevices. Enzyme reactors in microdevices, fabricated in glass, silicon, and PDMS substrates, have recently been demonstrated for model protein digestions. The common approach used for these enzyme reactors is employment of a syringe pump(s) to generate hydrodynamic flow, driving the proteins through the reactors. Here we present a novel approach, using electroosmotic flow (EOF) to electrokinetically pump proteins through a proteolytic system. The existence of EOF in the proteolytic system packed with immobilized trypsin gel beads was proven by imaging the movement of a neutral fluorescent marker. Digestions of proteins were subsequently carried out for 12 min, and the tryptic peptides were analyzed independently using capillary electrophoresis (CE) and MALDI-TOF mass spectrometry (MS). The results from CE analysis of the tryptic peptides from the EOF-driven proteolytic system and a conventional water bath digestion were comparable. MALDI-TOF MS was used to identify the parent protein and the tryptic peptides using MS-Fit database searching. The potential utility of the EOF-driven proteolytic system was demonstrated by direct electro-elution of proteins from an acrylamide gel into the proteolytic system, with elution and tryptic digestion achieved in a single step. The EOF-driven proteolytic system, thus, provides a simple way to integrate protein digestion into an electrophoretic micro total analysis system for protein analysis and characterization.     

Aza-analogues of cage compounds: Potential precursors to azacubanes and 1-azahomocubanes

Exploration of the reactions of the 9-azahomocubane system led to derivatives of two small-ring systems containing aza-bridging atoms, 5-azatetracyclo[4.2.0.0^3,8.0^4,7]octane and 9-azatetracyclo[4.3.0.0^2,5.0^4,7]nonane. The structures were characterized by X-ray diffraction analyses. There are no prior X-ray structural reports on these systems.