Structure, equilibrium and ligand exchange dynamics in the binary and ternary dioxouranium(VI)-ethylenediamine-N,N'-diacetic acid-fluoride system: A potentiometric, NMR and X-ray crystallographic study

The structure, thermodynamics and kinetics of the binary and ternary uranium(VI)-ethylenediamine-N,N'-diacetate (in the following denoted EDDA) fluoride systems have been studied using potentiometry, 1H, 19F NMR spectroscopy and X-ray diffraction. The UO2(2+)-EDDA system could be studied up to -log[H3O+] = 3.4 where the formation of two binary complexes UO2(EDDA)(aq) and UO2(H3EDDA)3+ were identified, with equilibrium constants logbeta(UO2EDDA) = 11.63 +/- 0.02 and logbeta(UO2H3EDDA3+) = 1.77 +/- 0.04, respectively. In the ternary system the complexes UO2(EDDA)F-, UO2(EDDA)(OH)- and (UO2)2(mu-OH)2(HEDDA)2F2(aq) were identified; the latter through 19F NMR. 1H NMR spectra indicate that the EDDA ligand is chelate bonded in UO2(EDDA)(aq), UO2(EDDA)F- and UO2(EDDA)(OH)- while only one carboxylate group is coordinated in UO2(H3EDDA)3+. The rate and mechanism of the fluoride exchange between UO2(EDDA)F- and free fluoride was studied by 19F NMR spectroscopy. Three reactions contribute to the exchange; (i) site exchange between UO2(EDDA)F- and free fluoride without any net chemical exchange, (ii) replacement of the coordinated fluoride with OH- and (iii) the self dissociation of the coordinated fluoride forming UO2(EDDA)(aq); these reactions seem to follow associative mechanisms. (1)H NMR spectra show that the exchange between the free and chelate bonded EDDA is slow and consists of several steps, protonation/deprotonation and chelate ring opening/ring closure, the mechanism cannot be elucidated from the available data. The structure (UO2)2(EDDA)2(mu-H2EDDA) was determined by single crystal X-ray diffraction and contains two UO2(EDDA) units with tetracoordinated EDDA linked by H2EDDA in the "zwitterion" form, coordinated through a single carboxylate oxygen from each end to the two uranium atoms. The geometry of the complexes indicates that there is no geometric constraint for an associative ligand substitution mechanism.     

Reactivity of the "yl"-bond in uranyl(VI) complexes. 1. Rates and mechanisms for the exchange between the trans-dioxo oxygen atoms in (UO2)2(OH)2 2+ and mononuclear UO2(OH)n 2-n complexes with solvent water

The stoichiometric mechanism, rate constant, and activation parameters for the exchange of the "yl"-oxygen atoms in the dioxo uranium(VI) ion with solvent water have been studied using 17O NMR spectroscopy. The experimental rate equation, (-->)v= k(2obs)[UO2(2+)]tot2/[H+]2, is consistent with a mechanism where the first step is a rapid equilibrium 2U(17)O2(2+) + 2H2O<==>(U(17)O2)2(OH)2(2+) + 2H+, followed by the rate-determining step (U(17)O2)2(OH)2(2+) + H2O<==>(UO2)2*(OH)2(2+) + H2(17)O, where the back reaction can be neglected because the (17)O enrichment in the water is much lower than in the uranyl ion. This mechanism results in the following rate equation (-->)v= d[(UO2)2(OH)2(2+)]/dt = k(2,2)[(UO2)2(OH)2(2+)] = k(2,2*)beta(2,2)[UO2(2+)]2/[H + ]2; with k(2,2) = (1.88 +/- 0.22) x 10(4) h(-1), corresponding to a half-life of 0.13 s, and the activation parameters DeltaH++ = 119 +/- 13 kJ mol-1 and DeltaS++ = 81 +/- 44 J mol(-1) K(-1). *Beta(2,)2 is the equilibrium constant for the reaction 2UO2(2+) + 2H2O<==>(UO2)2(OH)2(2+) + 2H+. The experimental data show that there is no measurable exchange of the "yl"-oxygen in UO2(2+), UO2(OH)+, and UO2(OH)4(2-)/ UO2(OH)5(3-), indicating that "yl"-exchange only takes place in polynuclear hydroxide complexes. There is no "yl"-exchange in the ternary complex (UO2)2(mu-OH)2(F)2(oxalate)2(4-), indicating that it is also necessary to have coordinated water in the first coordination sphere of the binuclear complex, for exchange to take place. The very large increase in lability of the "yl"-bonds in (UO2)2(OH)2(2+) as compared to those of the other species is presumably a result of proton transfer from coordinated water to the "yl"-oxygen, followed by a rapid exchange of the resulting OH group with the water solvent. "Yl"-exchange through photochemical mediation is well-known for the uranyl(VI) aquo ion. We noted that there was no photochemical exchange in UO2(CO3)3(4-), whereas there was a slow exchange or photo reduction in the UO2(OH)4(2-) / UO2(OH)5(3-) system that eventually led to the appearance of a black precipitate, presumably UO2.     

The mechanism for water exchange in [UO(2)(H(2)O)(5)](2+) and [UO(2)(oxalate)(2)(H(2)O)](2-), as studied by quantum chemical methods.

The mechanisms for the exchange of water between [UO(2)(H(2)O)(5)](2+), [UO(2)(oxalate)(2)(H(2)O)](2)(-)(,) and water solvent along dissociative (D), associative (A) and interchange (I) pathways have been investigated with quantum chemical methods. The choice of exchange mechanism is based on the computed activation energy and the geometry of the identified transition states and intermediates. These quantities were calculated both in the gas phase and with a polarizable continuum model for the solvent. There is a significant and predictable difference between the activation energy of the gas phase and solvent models: the energy barrier for the D-mechanism increases in the solvent as compared to the gas phase, while it decreases for the A- and I-mechanisms. The calculated activation energy, Delta U(++), for the water exchange in [UO(2)(H(2)O)(5)](2+) is 74, 19, and 21 kJ/mol, respectively, for the D-, A-, and I-mechanisms in the solvent, as compared to the experimental value Delta H(++) = 26 +/- 1 kJ/mol. This indicates that the D-mechanism for this system can be ruled out. The energy barrier between the intermediates and the transition states is small, indicating a lifetime for the intermediate approximately 10(-10) s, making it very difficult to distinguish between the A- and I-mechanisms experimentally. There is no direct experimental information on the rate and mechanism of water exchange in [UO(2)(oxalate)(2)(H(2)O)](2-) containing two bidentate oxalate ions. The activation energy and the geometry of transition states and intermediates along the D-, A-, and I-pathways were calculated both in the gas phase and in a water solvent model, using a single-point MP2 calculation with the gas phase geometry. The activation energy, Delta U(++), in the solvent for the D-, A-, and I-mechanisms is 56, 12, and 53 kJ/mol, respectively. This indicates that the water exchange follows an associative reaction mechanism. The geometry of the A- and I-transition states for both [UO(2)(H(2)O)(5)](2+) and [UO(2)(oxalate)(2)(H(2)O)](2-) indicates that the entering/leaving water molecules are located outside the plane formed by the spectator ligands.     

X-ray absorption fine structure spectroscopic studies of Octakis(DMSO)lanthanoid(III) complexes in solution and in the solid iodides

Octakis(DMSO)lanthanoid(III) iodides (DMSO = dimethylsulfoxide), [Ln(OS(CH3)2)8]I3, of most lanthanoid(III) ions in the series from La to Lu have been studied in the solid state and in DMSO solution by extended X-ray absorption fine structure (EXAFS) spectroscopy. L3-edge and also some K-edge spectra were recorded, which provided mean Ln-O bond distances for the octakis(DMSO)lanthanoid(III) complexes. The agreement with the average of the Ln-O bond distances obtained in a separate study by X-ray crystallography was quite satisfactory. The crystalline octakis(DMSO)lanthanoid(III) iodide salts have a fairly broad distribution of Ln-O bond distances, ca. 0.1 A, with a few disordered DMSO ligands. Their EXAFS spectra are in excellent agreement with those obtained for the solvated lanthanoid(III) ions in DMSO solution, both of which show slightly asymmetric distributions of the Ln-O bond distances. Hence, all lanthanoid(III) ions are present as octakis(DMSO)lanthanoid(III) complexes in DMSO solution, with the mean Ln-O distances centered at 2.50 (La), 2.45 (Pr), 2.43 (Nd), 2.41 (Sm), 2.40 (Eu), 2.39 (Gd), 2.37 (Tb), 2.36 (Dy), 2.34 (Ho), 2.33 (Er), 2.31 (Tm), and 2.29 A (Lu). This decrease in the Ln-O bond distances is larger than expected from the previously established ionic radii for octa-coordination. This indicates increasing polarization of the LnIII-O(DMSO) bonds with increasing atomic number. However, the S(1s) electron transition energies in the sulfur K-edge X-ray absorption near-edge structure (XANES) spectra, probing the unoccupied molecular orbitals of lowest energy of the DMSO ligands for the [Ln(OS(CH3)2)8](3+) complexes, change only insignificantly from Ln = La to Lu. This indicates that there is no appreciable change in the sigma-contribution to the S-O bond, probably due to a corresponding increase in the contribution from the sulfur lone pair to the bonding.     

Design, engineering and utility of biotic games

Games are a significant and defining part of human culture, and their utility beyond pure entertainment has been demonstrated with so-called 'serious games'. Biotechnology--despite its recent advancements--has had no impact on gaming yet. Here we propose the concept of 'biotic games', i.e., games that operate on biological processes. Utilizing a variety of biological processes we designed and tested a collection of games: 'Enlightenment', 'Ciliaball', 'PAC-mecium', 'Microbash', 'Biotic Pinball', 'POND PONG', 'PolymerRace', and 'The Prisoner's Smellemma'. We found that biotic games exhibit unique features compared to existing game modalities, such as utilizing biological noise, providing a real-life experience rather than virtual reality, and integrating the chemical senses into play. Analogous to video games, biotic games could have significant conceptual and cost-reducing effects on biotechnology and eventually healthcare; enable volunteers to participate in crowd-sourcing to support medical research; and educate society at large to support personal medical decisions and the public discourse on bio-related issues.     

Structure and dynamics of binary and ternary lanthanide(III) and actinide(III) tris[4,4,4-trifluoro-1-(2-thienyl)-1,3-butanedione] (TTA)-tributylphosphate (TBP) complexes. Part 3, the structure, thermodynamics and reaction mechanisms of 8- and 9-coordinated binary and ternary Y-TTA-TBP complexes studied by quantum chemical methods

Possible mechanisms for intermolecular exchange between coordinated and solvent water in the complexes Y(TTA)(3)(OH(2))(2) and Y(TTA)(3)(TBP)(OH(2)) and intermolecular exchange between free and coordinated HTTA in Y(TTA)(3)(OH(2))(HTTA) and Y(TTA)(3)(TBP)(HTTA) have been investigated using ab initio quantum chemical methods. The calculations comprise both structures and energies of isomers, intermediates and transition states. Based on these data and experimental NMR data (Part 2) we have suggested intimate reaction mechanisms for water exchange, intramolecular exchange between structure isomers and intermolecular exchange between free HTTA and coordinated TTA. A large number of isomers are possible for the complexes investigated, but only some of them have been investigated, in all of them the most stable geometry is a more or less distorted square anti-prism or bicapped trigonal prism; the energy differences between the various isomers are in general small, less than 10 kJ mol(-1). 9-coordinated intermediates play an important role in all reactions. Y(TTA)(3)(OH(2))(3) has three non-equivalent water ligands that can participate in ligand exchange reactions. The fastest of these exchanging sites has a QM activation energy of 18.1 kJ mol(-1), in good agreement with the experimental activation enthalpy of 19.6 kJ mol(-1). The mechanism for the intramolecular exchange between structure isomers in Y(TTA)(3)(OH(2))(2) involves the opening of a TTA-ring as the rate determining step as suggested by the good agreement between the QM activation energy and the experimental activation enthalpy 47.8 and 58.3 J mol(-1), respectively. The mechanism for the intermolecular exchange between free and coordinated HTTA in Y(TTA)(3)(HTTA) and Y(TTA)(3)(TBP)(HTTA) involves the opening of the intramolecular hydrogen bond in coordinated HTTA followed by proton transfer to coordinated TTA. This mechanism is supported by the good agreement between experimental activation enthalpies (within parenthesis) and calculated activation energies 68.7 (71.8) and 35.3 (38.8) kJ mol(-1). The main reason for the difference between the two systems is the much lower energy required to open the intramolecular hydrogen bond in the latter. The accuracy of the QM methods and chemical models used is discussed.     

Simulation of Premixed Turbulent Combustion in a Gas Engine using the Immersed Boundary Method and a Level Set Flame Model

An efficient simulation approach for turbulent flame brush propagation is a level set formulation closed by the turbulent flame speed. A formulation of the level set equation with the corresponding treatment of the turbulent mass burning rate that is compatible with standard Finite Volume discretization schemes available in computational fluid dynamics codes is employed. In order to simplify and to speed up the meshing process in complicated geometries (here in gas engines) the immersed boundary method in a continuous formulation, where the forces replacing the boundaries are introduced in the momentum conservation equations before discretization, is employed. In our contribution, aspects of the numerical implementation of the level set flame model combined with the immersed boundary formulation in OpenFOAM are presented. First representative simulation results of a homogeneous methane/air mixture combustion in a simplified engine geometry are shown. (© 2014 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim)     

Electrophysiological correlates of associative learning in smokers: a higher-order conditioning experiment

Background  

Classical conditioning has been suggested to play an important role in the development, maintenance, and relapse of tobacco smoking. Several studies have shown that initially neutral stimuli that are directly paired with smoking are able to elicit conditioned responses. However, there have been few human studies that demonstrate the contribution of higher-order conditioning to smoking addiction, although it is assumed that higher-order conditioning predominates learning in the outside world. In the present study a higher-order conditioning task was designed in which brain responses of smokers and non-smokers were conditioned by pairing smoking-related and neutral stimuli (CS1_smoke and CS1_neutral) with two geometrical figures (CS2_smoke and CS2_neutral). ERPs were recorded to all CSs.     

Holography and Local Fields

This paper, which is a summary (in which considerable creative license has been taken) of the author’s talk at the sixth international conference on p-adic mathematical physics and its applications (CINVESTAV, Mexico City, October 2017), reviews some recent work connecting field theories defined on the p-adic numbers and ideas from the AdS/CFT correspondence. Some results are included, along with general discussion of the utility and interest of p-adic analogues of Lagrangian field theories, at least from the author’s perspective. A few challenges, shortcomings, and ideas for future work are also discussed.     

Sorption Mechanisms of Eu(3+) on CSH Phases of Hydrated Cements

The sorption mechanisms of Eu(3+) on calcium silicate hydrate (CSH) phases of hydrated cement were investigated as a tool for the prediction of the behavior of trivalent radionuclides with aged/degraded cements in radioactive waste repositories. Four techniques were used: site-selective and time-resolved luminescence spectroscopy, XPS, high-resolution SEM coupled with EDX, and XRD. Results showed that europium is not precipitated in the solution despite its low solubility limit. It is strongly retained on CSH, resulting in a more than 99.8% sorption rate. Two main sorption sites were characterized by luminescence spectroscopy. One site, with a long lifetime, can be interpreted as Eu included in the framework of CSH. Another one, with a shorter lifetime, can be interpreted as a site with a hydrated environment that is high but is less than that of europium hydroxide. It corresponds to superficial complexation or precipitation. Copyright 2001 Academic Press.