Near-UV resonant two-photon ionization spectroscopy of gas phase guanine: evidence for the observation of three rare tautomers

In light of a recently published study on the IR spectroscopy of guanine in He droplets (Choi, M. Y.; Miller, R. E. J. Am. Chem. Soc. 2006, 128, 7320), the present letter proposes a new interpretation of the resonant two-photon ionization (R2PI) experiments on gas phase guanine, which is supported by quantum chemistry calculations. Whereas He droplet experiments detect the most stable forms, only one of these forms is observed (very marginally) in the R2PI spectrum, which is actually dominated by three less stable "rare" tautomers, whose stabilities lie in the 3-7 kcal/mol range. The absence of the most stable forms in the R2PI spectrum suggests that a tautomer-dependent ultrafast relaxation process takes place in the excited state of these stable tautomers. The present reinterpretation modifies qualitatively the picture of the excited state of guanine tautomers and should contribute to the understanding of the deactivation mechanisms taking place in the excited state of DNA bases.     

Pyrene bichromophores composed of polyaminopolycarboxylate interlink: pH response of excimer emission

Fluorescent response to pH has been studied on water-soluble pyrene-based bichromophores, (edtapy)H₂ and (dtpapy)H₃, in which two pyrenyl groups are linked by an ethylenediaminetetraacetate (EDTA) and a diethylenetriaminepentaacetate (DTPA) unit, respectively, through amide linkages. The excimer emission of the EDTA derivative is strengthened sharply with increasing pH at two steps; the first step is associated with the dissociation of acidic hydrogen from amino nitrogen in partially protonated species (edtapy)H^?  and the second step is attributable to the amide group. The excitation spectra have evidenced the formation of a static excimer in the ground state of completely deprotonated species (edtapy)^2 ? . The close contact between pyrenyl groups in (edtapy)^2 ?  has been confirmed by density functional theory, which has also shown that the close contact is broken when amino nitrogen is protonated. The DTPA derivative exhibits a strong excimer emission, which shows an intensity–pH profile of an ‘off–on–off–on’ type. This rare pH response is ascribable to multiple protonation sites in the DTPA chain, as confirmed by ¹H NMR. The novel pH-sensing capabilities in specific pH regions are due to the combination of the fluorescent group with the polyaminopolycarboxylate chains whose conformations are reversibly altered by protonation–deprotonation processes.     

Secondary structures of short peptide chains in the gas phase: double resonance spectroscopy of protected dipeptides

The conformational structure of short peptide chains in the gas phase is studied by laser spectroscopy of a series of protected dipeptides, Ac-Xxx-Phe-NH(2), Xxx=Gly, Ala, and Val. The combination of laser desorption with supersonic expansion enables us to vaporize the peptide molecules and cool them internally; IR/UV double resonance spectroscopy in comparison to density functional theory calculations on Ac-Gly-Phe-NH(2) permits us to identify and characterize the conformers populated in the supersonic expansion. Two main conformations, corresponding to secondary structures of proteins, are found to compete in the present experiments. One is composed of a doubly gamma-fold corresponding to the 2(7) ribbon structure. Topologically, this motif is very close to a beta-strand backbone conformation. The second conformation observed is the beta-turn, responsible for the chain reversal in proteins. It is characterized by a relatively weak hydrogen bond linking remote NH and CO groups of the molecule and leading to a ten-membered ring. The present gas phase experiment illustrates the intrinsic folding properties of the peptide chain and the robustness of the beta-turn structure, even in the absence of a solvent. The beta-turn population is found to vary significantly with the residues within the sequence; the Ac-Val-Phe-NH(2) peptide, with its two bulky side chains, exhibits the largest beta-turn population. This suggests that the intrinsic stabilities of the 2(7) ribbon and the beta-turn are very similar and that weakly polar interactions occurring between side chains can be a decisive factor capable of controlling the secondary structure.     

Selective estimation of soot in home dust by EPR spectrometry

The content of soot in home dust collected from eight different flats or homes situated in different areas of Sofia, Bulgaria, is studied for a period of 14 months by using EPR spectrometry. The results obtained show two different areas in respect to the in-door pollution with soot which in one area is three to five times lower in comparison to the another. The characteristic features of both places are the intensive automotive traffic and central heating in the first part and less intensive automotive traffic but local heating facilities in the second area. These results are fully coinciding with previous studies on the soot content in urban aerosols and strongly suggest that main source of soot in air (in form of aerosols or precipitated as home dust) are the local heating facilities.     

Corrole and Porphyrin Amino Acid Conjugates: Synthesis and Physicochemical Properties

A series of conjugates of amino acids with porphyrins and corroles was synthesized. Their self‐assembling ability under defined conditions was investigated by scanning electron microscopy. The morphology and photophysical properties of these molecules were studied by absorption and fluorescence spectroscopy in solid, liquid, and self‐assembled forms. We observed that both corrole and porphyrin conjugated with the l ‐phenylalanine–l ‐phenylalanine peptide to form spherical nanostructures with bathochromic shifts in the emission spectra, indicating the formation of aggregates. These aggregates are characterized by the impressive absorption of light over nearly the whole visible range. The broadening of all bands was particularly strong in the case of corroles. The fluorescence lifetimes of self‐assembled species were longer as compared to the solid‐state form.     

Time-resolved photoelectron and photoion fragmentation spectroscopy study of 9-methyladenine and its hydrates: a contribution to the understanding of the ultrafast radiationless decay of excited DNA bases

The excited state dynamics of the purine base 9-methyladenine (9Me-Ade) has been investigated by time- and energy-resolved photoelectron imaging spectroscopy and mass-selected ion spectroscopy, in both vacuum and water-cluster environments. The specific probe processes used, namely a careful monitoring of time-resolved photoelectron energy distributions and of photoion fragmentation, together with the excellent temporal resolution achieved, enable us to derive additional information on the nature of the excited states (pipi*, npi*, pisigma*, triplet) involved in the electronic relaxation of adenine. The two-step pathway we propose to account for the double exponential decay observed agrees well with recent theoretical calculations. The near-UV photophysics of 9Me-Ade is dominated by the direct excitation of the pipi* ((1)L(b)) state (lifetime of 100 fs), followed by internal conversion to the npi* state (lifetime in the ps range) via conical intersection. No evidence for the involvement of a pisigma* or a triplet state was found. 9Me-Ade-(H(2)O)(n) clusters have been studied, focusing on the fragmentation of these species after the probe process. A careful analysis of the fragments allowed us to provide evidence for a double exponential decay profile for the hydrates. The very weak second component observed, however, led us to conclude that the photophysics were very different compared with the isolated base, assigned to a competition between (i) a direct one-step decay of the initially excited state (pipi* L(a) and/or L(b), stabilised by hydration) to the ground state and (ii) a modified two-step decay scheme, qualitatively comparable to that occurring in the isolated molecule.     

Probing the competition between secondary structures and local preferences in gas phase isolated peptide backbones

Combining laser desorption with a supersonic expansion together with the selectivity of IR/UV double resonance spectroscopy makes it possible to isolate and characterise the gas phase of remarkable backbone conformations of short peptide chains mimicking protein segments. A systematic bottom-up approach involving a conformer-specific IR study of peptide sequences of increasing sizes has enabled us to map the spectral signatures of the intramolecular interactions, which shape the peptide backbone, in particular H-bonds. The precise data collected are directly comparable to the most sophisticated quantum chemistry calculations of these species and therefore constitute a stringent test for the theoretical methods used. One-residue chains reveal the local conformational preference of the backbone and its dependence upon the nature of the residue. The investigation of longer chains provides evidence for a competition between simple successions of local conformational preferences along the chain and more folded structures, in which a new H-bonding network, involving distant H-bonding sites along the backbone, takes place. From three residues, the issue of helical folding can also be addressed. The present review of the gas phase literature data emphasizes the observation of remarkable secondary structures of biology, including short segments of beta-strands, gamma- and beta-turns, combinations of turns, including a 3(10) helix. It also provides evidence for the flexibility of the peptide chains, i.e., a critical influence of rather minor interactions (like side-chain/backbone interactions) on the conformational stability. Finally, the paper will discuss future promising directions of the present approach.     

Building a new mind set in tomorrow fashion development through circular strategy models in the framework of waste management

Energy, food, and clothing are the three main components of humanity. Each one individually and all together contribute to climate change and CO₂ emissions, to the consumption of natural resources, as well as influencing social attitude and behaviour. The global trends of the fashion industry are projected to expand in value from $1.5 trillion in 2020 to about $2.25 trillion by 2025, presenting that the fashion request is on continual growth. As natural resources (e.g., water) to produce clothes and shoes are limited nowadays, more resource-efficient production pathways must be identified; moreover, natural materials must replace plastic fibres, natural colours must replace synthetic ones, and ‘buy-and throw-way philosophy’ must turn into ‘buy-less-and-these-are-needed’ as so to reduce the environmental footprint of the fashion sector. This work emphasized the necessity of developing a new business circular model for the fashion industry with the potential of providing plethora of economic opportunities in the framework of waste management. Clear vision and new strategy development in the fashion sector is proposed, including the involvement of customers, businesses and policy makers, driven by the promotion of circular economy through knowledge exchange, education as well as regulatory relief measures for a synergic transition towards the circularity of the fashion industry.