Synthesis and characterization of a series of highly fluorogenic substrates for glutathione transferases, a general strategy

Glutathione transferases (GSTs) are used in biotechnology applications as fusion partners for facile purification and are also overexpressed in certain tumors. Consequently, there is a need for sensitive detection of the enzymes. Here we describe a general strategy for the synthesis and characterization of novel fluorogenic substrates for GSTs. The substrates were synthesized by introducing an electrophilic sulfonamide linkage to fluorescent molecules containing an amino group [e.g., 2,4-dinitrobenzenesulfonamide (DNs) derivatives of coumarin, cresyl violet, and rhodamine]. The derivatives were essentially nonfluorescent, and upon GST catalyzed cleavage of the dinitrobenzenesulfonamide, free fluorophore is released (and 1-glutathionyl-2,4-dinitrobenzene + SO(2)). All the coumarin-, cresyl violet- and rhodamine-based fluorogenic probes turned out to be good substrates for most GSTs, especially for GSTA(1-1), in terms of strong fluorescence increases (71-1200-fold), high k(cat)/K(m) values (10(4)-10(7) M(-1) s(-1)) and significant rate enhancements (10(6)-10(9)-fold). The substrates were successfully applied to quantitate very low levels of GST activity in cell extracts and DNs-cresyl violet was also successfully applied to the imaging of microsomal MGST(1) activity in living cells. The cresyl violet stained cells retained their fluorescence after fixation, which is a very useful property. In summary, we describe a general and versatile strategy to generate fluorogenic GST substrates, some of them providing the most sensitive assays so far described for GSTs.     

"Quenchbodies": quench-based antibody probes that show antigen-dependent fluorescence

Here, we describe a novel reagentless fluorescent biosensor strategy based on the antigen-dependent removal of a quenching effect on a fluorophore attached to antibody domains. Using a cell-free translation-mediated position-specific protein labeling system, we found that an antibody single chain variable region (scFv) that had been fluorolabeled at the N-terminal region showed a significant antigen-dependent fluorescence enhancement. Investigation of the enhancement mechanism by mutagenesis of the carboxytetramethylrhodamine (TAMRA)-labeled anti-osteocalcin scFv showed that antigen-dependency was dependent on semiconserved tryptophan residues near the V(H)/V(L) interface. This suggested that the binding of the antigen led to the interruption of a quenching effect caused by the proximity of tryptophan residues to the linker-tagged fluorophore. Using TAMRA-scFv, many targets including peptides, proteins, and haptens including morphine-related drugs could be quantified. Similar or higher sensitivities to those observed in competitive ELISA were obtained, even in human plasma. Because of its versatility, this "quenchbody" is expected to have a range of applications, from in vitro diagnostics, to imaging of various targets in situ.     

Resveratrol derivatives from Vatica albiramis

Three new stilbene derivatives, albiraminols A (1) (resveratrol hexamer), B (2) (resveratrol dimer), and vatalbinoside F (3) (mono-glucoside of resveratrol dimer), along with malibatol were isolated from acetone soluble portions of the stem of Vatica albiramis. The structures of the isolates were established on the basis of spectroscopic analyses, including a detailed NMR spectroscopic investigation. The biosynthetic aspects of the isolates are discussed in this paper. Compound 1 is composed of tetrameric resveratrol (vaticanol B (1A)) and dimeric resveratrol (1B) and is the first instance of the resveratrol derivative bearing a 5,6,11,12-tetrahydro-5,11-epoxydibenzo[a,e][8]annulene ring system. Compound 2 possesses a novel 4,5-dihydro-13-oxabenzo[3,4]azuleno[7,8,1-jkl]phenanthrene skeleton in the framework.     

Glass transition behaviour of the quaternary ammonium type ionic liquid, {[DEME][I] + H2O} mixtures

By a simple DTA system, the glass transition temperatures of the quaternary ammonium type ionic liquid, {N,N-diethyl-N-methyl-N-(2-methoxyethyl) ammonium iodide, [DEME][I] + H₂O} mixtures after quick pre-cooling were measured as a function of water concentration (x mol% H₂O). Results were compared with the previous results of {[DEME][BF₄] + H₂O} mixtures in which double glass transitions were observed in the water concentration region of (16.5 to 30.0) mol% H₂O. Remarkably, we observed the double glass transition phenomenon in {[DEME][I] + H₂O} mixtures too, but the two-T_gs regions lie towards the water-rich side of (77.5 to 85.0) mol% H₂O. These clearly reflect the difference in the anionic effect between ${\text{BF}}_4^{-}$ and I^? on the water structure. The end of the glass-formation region of {[DEME][I] + H₂O} mixtures is around x = 95.0 mol% H₂O, and this is comparable to that of {[DEME][BF₄] + H₂O} mixtures (x = 96.0 mol% H₂O).     

Synthesis of chiral 1-substituted tetrahydroisoquinolines by the intramolecular 1,3-chirality transfer reaction catalyzed by Bi(OTf)3

The intramolecular 1,3-chirality transfer reaction of chiral amino alcohols 1 with 99% ee was developed to construct chiral 1-substituted tetrahydroisoquinoline 2. Bi(OTf)(3) (10 mol %)-catalyzed cyclization of 1 (R = H) afforded (S)-1-(E)-propenyl tetrahydroisoquinoline 2 (R = H) in 83% yield with a ratio of 98:2. The stereochemistry at the newly formed chiral center was produced by a syn S(N)2'-type process. In this reaction, the substituent on the benzene ring of 1 significantly affected the reactivities and selectivities. A plausible reaction mechanism was proposed.     

Determination of Cr(III) and Cr(VI) in water by wavelength‐dispersive X‐ray fluorescence spectrometry after preconcentration with an ion‐exchange resin disk

A rapid and simple method using an ion‐exchange resin disk combined with wavelength‐dispersive X‐ray fluorescence (WDXRF) spectrometry was developed for the determination of Cr(III) and Cr(VI) in water. A 100‐ml water sample was first adjusted to pH 3 with nitric acid and then passed through an anion‐exchange resin disk placed on top of a cation‐exchange resin disk at a flow rate of 1 ml min^?1 to separate Cr(III) and Cr(VI). Anionic Cr(VI) was preconcentrated on the upper anion‐exchange resin disk, whereas cationic Cr(III) was preconcentrated on the lower cation‐exchange resin disk. Each ion‐exchange resin disk was dried at 100 °C for 30 min in an electric oven and coated with a commercially available laminate film. The specimens were measured using a WDXRF spectrometer. The calibration curves of Cr(III) and Cr(VI) showed good linearity in the range 1–10 µg. The detection limits corresponding to three times the standard deviation (n = 5) of blank values were 0.17 µg for Cr(III) and 0.16 µg for Cr(VI). If a 1‐l water sample is used, these limits would be 0.17 and 0.16 µg l^?1, respectively. A spike test for 50 µg l^?1 Cr(III) and Cr(VI) in tap water and river water showed quantitative recoveries (94–114%), although this was not observed for mineral drinking water owing to the overlap of V Kβ with Cr Kα. The recovery after overlap correction was satisfactory (115%). Copyright © 2011 John Wiley & Sons, Ltd.     

The Stability of the Family of B 2-Type Arrangements

We introduce the family of B ₂-type arrangements as a generalization of the classical Coxeter arrangement of type B ₂ and consider the stability and the freeness of it. We show the freeness and (semi)stability are determined by the combinatorics. Moreover, we give a partial answer to the 4-shift problem, which is a conjecture on the combinatorics and geometry induced from the B ₂-type arrangements.     

Fundamental burning velocities of meso-scale propagating spherical flames with H2, CH4 and C3H8 mixtures

This study is performed to experimentally examine the fundamental burning velocity characteristics of meso-scale outwardly propagating spherical laminar flames in the range of flame radius r_f approximately from 1 to 5 mm for hydrogen, methane and propane mixtures, in order to make clear a method for improving combustion of micro–meso scale flames. Macro-scale laminar flames with r_f > 7 mm are also examined for comparison. The mixtures have nearly the same laminar burning velocity (S_L0 = 25 cm/s) for unstretched flames and different equivalence ratios ?. The radius r_f and the burning velocity S_Ll of meso-scale flames are estimated by using sequential schlieren images recorded under appropriate ignition conditions. It is found that S_Ll of hydrogen and methane premixed meso-scale flames at the same r_f or the Karlovitz number Ka shows a tendency to increase with decreasing ?, whereas S_Ll of propane flames increases with ?. However, S_Ll tends to decrease with the Lewis number Le and the Markstein number Ma, irrespective of the type of fuel and ?. It also becomes clear that the optimum flame size and Ka to improve the burning velocity exist for some mixtures depending on Le and fuel types.     

Conversion ratio to F-H center pairs from self-trapped excitons in alkali chloride crystals

Abstract

The time delayed double excitation spectroscopy has been utilized to determine the conversion ratio to F-H center pairs from self-trapped excitons(STE_L) at the lowest state (1s[sgrave]_g;a_1g). The final conversion ratios, η_F/(η_F+η_X), were 0.86, 0.49 and 0.20 for NaCl, KCl and RbCl at 14K, respectively. The conversion efficiency (η =η_F+η_X) from STE_L to F-H center pairs(η_F) and to unknown states(η_X) were 0.25, 0.90 and 0.76 for the hole excitation to π_g, while 0.03, 0.01 and 0.01 for the electron excitation to b_1u, b_2u or b_3u, in NaCl, KCl and RbCl, respectively.     

Monte Carlo Simulation for the Photoinduced Phase Transition on a Two-Dimensional Stripe-Structure

By means of Monte Carlo simulations for a kinetic Ising model on a two-dimensional square lattice, we demonstrate that a photoinduced phase transition is accomplished more rapidly even for weaker light in a stripe-structure consisting of two kinds of constituent units than in a homogeneous structure. This is due to accelerated nucleation of a final phase in the constituent unit that is relatively close to instability locally.