UV‐Vis Spectroscopy Reveals a Correlation Between Y263 and BV Protonation States in Bacteriophytochromes

Red‐light photosensory proteins, phytochromes, link light activation to biological functions by interconverting between two conformational states. For this, they undergo large‐scale secondary and tertiary changes which follow small‐scale Z to E bond photoisomerization of the covalently bound bilin chromophore. The complex network of amino acid interactions in the chromophore‐binding pocket plays a central role in this process. Highly conserved Y263 and H290 have been found to be important for the photoconversion yield, while H260 has been identified as important for bilin protonation and proton transfer steps. Here, we focus on the roles these amino acids are playing in preserving the chemical properties of bilin in the resting Pr state of the photosensory unit of a bacteriophytochrome from Deinococcus radiodurans. By using pH‐dependent UV‐Vis spectroscopy and spectral decomposition modeling, we confirm the importance of H260 for biliverdin protonation. Further, we demonstrate that in the canonical bacteriophytochromes, the pK_a value of the phenol group of the Y263 is uncommonly low. This directly influences the protonation of the bilin molecule and likely the functional properties of the protein. Our study expands the understanding of the tight interplay between the nearby amino acids and bilin in the phytochrome family.     

Nano-scale mapping of mechanical and chemical surface properties of pigment coated surfaces by torsional harmonic atomic force microscopy

In this study, torsional harmonic atomic force microscopy (TH-AFM, HarmoniX mode) was applied for surface mapping of the mechanical properties of pigment-latex coated paper samples. In addition, topographic images and force maps of adhesive tip-sample interactions were captured concurrently. The spatial distribution of latex binder on the composite surface was distinguished with high resolution. The latex was found to dominate the surface chemistry of the composite coating, despite the fact that latex is a minor component in the coating color formulation. The latex resided as a thick layer between the pigments and as a thin layer on the individual pigments. In addition, the tip-sample thermodynamic work of adhesion of the composite materials on the coated surface was compared to the surface energy values obtained by contact angle measurements. A high tip-sample work of adhesion correlated to high surface energy.     

Determination of the glass transition temperature of latex films: Comparison of various methods

The glass transition temperature (T_g) for two latices with different styrene/butadiene compositions was determined by the thermal SPM probe resonance frequency method. The results were compared with the T_g values obtained by differential scanning calorimetry (DSC), dynamical mechanical analysis (DMA), process rheometer (PR) and thermo-mechanical analyzer (TMA) measurements. The T_g values detected by the thermal SPM method agreed well with the T_g values obtained by DSC and calculated by the Fox–Flory equation. DMA, on the other hand, showed a significantly higher T_g value for both latices than those obtained from theoretical calculations, the thermal SPM method and DSC. The T_g obtained from the PR curve was slightly higher for the latex with a low styrene content, whereas good agreement was obtained with the thermal SPM data for the latex with a high styrene content. The glass transition temperature determined by TMA agreed fairly well with the thermal SPM data for the latex with the low styrene content, whilst the value of T_g for the second latex was much less than those obtained by the other methods. The thermal SPM method detects changes in thermal behavior (thermal diffusivity, heat capacity) during heating of the latex films rather than changes in the mechanical properties. Information about the sample history could be seen in the thermal SPM curves, which was further associated with the degree of latex film formation, especially when the roughness of the films was taken into consideration.     

Thermal and topographical characterization of polyester- and styrene/acrylate-based composite powders by scanning probe microscopy

The thermal properties of two conventional polyester-based toners and a chemically prepared styrene/acrylate toner with different thermal histories were studied by scanning probe microscopy (SPM) and differential scanning calorimetry (DSC). The thermal transition temperatures detected by SPM agreed with the results of the DSC measurements. The validity of SPM for detecting thermal transitions was further confirmed by studying two amorphous reference polymers with different glass transition points (T_g) and three crystalline reference polymers with different melting points (T_m). When the toner sample was heated by the SPM probe above the glass transition temperature of the toner powder (T_probe > T_g), changes occurred in the surface topography and roughness causing different levels of local sintering of the particles. A set of roughness parameters calculated from the SPM image data were used to quantify the most essential features of toner surfaces. Environmental scanning electron microscopy (ESEM) was used to study the penetration depth of heat dissipated by the SPM probe. The probe-annealing was compared with oven-annealing in order to establish the effect of thermal history on the thermal properties of the materials.     

Comparison of Elemental Blood Analysis in Intact and Dry Samples: Porous Membranes as a New Sampling Format

Moscow University Chemistry Bulletin - The possibility of using dry blood samples on porous glass fiber membrane carriers (PGMCs) for the quantitative elemental analysis of blood using the method...     

Low-cost reduced graphene oxide-based conductometric nitrogen dioxide-sensitive sensor on paper

The fabrication concept for a low-cost sensor device using reduced graphene oxide (rGO) as the sensing material on a porous paper substrate is presented. The sensors were characterized using conductivity and capacitance measurements, atomic force microscopy and X-ray photoelectron spectroscopy. The effects of different reducing agents, graphene oxide (GO) flake size and film thickness were studied. The sensor was sensitive to NO₂, and devices based on a thin (10-nm) hydrazine-reduced GO layer had the best sensitivity, reaching a 70 % reduction in resistance after 10 min of exposure to 10 ppm NO₂. The sensitivity was high enough for the detection of sub-parts per million levels of NO₂. Desorption of gas molecules, i.e. the recovery of the sensor, could be accelerated by UV irradiation. The structure and preparation of the sensor are simple and up-scalable, allowing their fabrication in bulk quantities, and the fabrication concept can be applied to other materials, too.

Isomerism of [64Cu-NOTA-Bn]-labeled radiotracers: separation of two complex isomers and determination of their interconversion energy barrier using ion pair chromatography

The model complex [(64)Cu((S)-p-NH(2)-Bn-NOTA)](-) ([(64)Cu]1) was used to study the isomerism of [(64)Cu-NOTA-Bn]-labeled radiotracers. Two complex isomers [(64)Cu]1a and [(64)Cu]1b, which were formed at a ratio of 1:9 during the complexation of [(64)Cu]Cu(2+) with (S)-p-NH(2)-Bn-NOTA, were separated using ion pair chromatography. To study the interconversion, the nonradioactive complex isomers Cu1a and Cu1b were separated and thermally treated at 90 °C in both ammonium acetate solution and deionized water. A faster interconversion rate was observed for both isomers with lower concentrations of ammonium ions. At the end of reaction, the thermodynamic Cu1a to Cu1b equilibrium ratio was 6:94. The particular energy barriers of the interconversion for Cu1a and Cu1b were 130 kJ mol(-1) and 140 kJ mol(-1). Spectrophotometric measurements with Cu1a and Cu1b revealed two isomers adopting different geometrical configurations.     

Quantitative determination of acetylcholine in microdialysis samples using liquid chromatography/atmospheric pressure spray ionization mass spectrometry

A fast, simple and sensitive liquid chromatography/tandem mass spectrometry (LC/MS/MS) method was developed for the determination of acetylcholine in rat brain microdialysis samples. The chromatographic separation was achieved in 3 min on a reversed-phase column with isocratic conditions using a mobile phase containing 2% (v/v) of acetonitrile and 0.05% (v/v) of trifluoroacetic acid (TFA). A stable isotope-labeled internal standard was included in the analysis and detection was carried out with a linear ion trap mass spectrometer using selected reaction monitoring (SRM). Analyte ionization was performed with an atmospheric pressure chemical ionization (APCI) source without applying discharge current (atmospheric pressure spray ionization). This special ionization technique offered significant advantages over electrospray ionization for the analysis of acetylcholine with reversed-phase ion-pairing chromatography. The lower limit of quantification was 0.15 nM (1.5 fmol on-column) and linearity was maintained over the range of 0.15-73 nM, providing a concentration range that is significantly wider than that of the existing LC/MS methods. Good accuracy and precision were obtained for concentrations within the standard curve range. The method was validated and has been used extensively for the determination of acetylcholine in rat brain microdialysis samples.     

A novel particle sampling system for physico-chemical and toxicological characterization of emissions

Several studies have shown that combustion-derived fine particles cause adverse health effects. Previous toxicological studies on combustion-derived fine particles have rarely involved multiple endpoints and a detailed characterization of chemical composition. In this study, we developed a novel particle sampling system for toxicological and chemical characterization (PSTC), consisting of the Dekati Gravimetric Impactor (DGI) and a porous tube diluter. Physico-chemical and toxicological properties of the particles emitted from various combustion sources were evaluated in two measurement campaigns. First, the DGI was compared with the High-Volume Cascade Impactor (HVCI) and to the Dekati Low-Pressure Impactor (DLPI), using the same dilution system and the same sampling conditions. Only small differences were observed in the mass size distributions, total particulate matter (PM), and particulate matter with diameter smaller than 1 um (PM(1)) concentrations and geometric mass mean diameters (GMMD) between these three impactors. Second, the PSTC was compared with the HVCI sampling system, which has been optimal for collection of particulate samples for toxicological and chemical analyses. Differences were observed in the mass size distributions, total PM and PM(1) emissions, and GMMDs, probably due to the different sampling and dilution methods as well as different sampling substrates which affected the behavior of semi-volatile and volatile organic compounds. However, no significant differences were detected in the in vitro measurements of cytotoxicity between the samples collected with the PSTC and the HVCI systems. In measurements of genotoxicity, significant differences between the two sampling systems were seen only with the particles emitted from the sauna stove. In conclusion, due to compact size, PSTC is an applicable method for use in particle sampling as part of the toxicological and chemical characterization of particulate emissions from different combustion sources. It offers some advantages compared to the previously used high-volume sampling methods including compactness for field measurements, simple preparation of sample substrates and high extraction efficiency.