5-amino-2-methylpyridinium hydrogen fumarate: An XRD and NMR crystallography analysis

Single-crystal X-ray diffraction structures of the 5-amino-2-methylpyridinium hydrogen fumarate salt have been solved at 150 and 300 K (CCDC 1952142 and 1952143). A base–acid–base–acid ring is formed through pyridinium-carboxylate and amine-carboxylate hydrogen bonds that hold together chains formed from hydrogen-bonded hydrogen fumarate ions. ¹H and ¹³C chemical shifts as well as ¹⁴N shifts that additionally depend on the quadrupolar interaction are determined by experimental magic angle spinning (MAS) solid-state nuclear magnetic resonance (NMR) and gauge-including projector-augmented wave (GIPAW) calculation. Two-dimensional homonuclear ¹H-¹H double-quantum (DQ) MAS and heteronuclear ¹H-¹³C and ¹⁴N-¹H spectra are presented. Only small differences of up to 0.1 and 0.6 ppm for ¹H and ¹³C are observed between GIPAW calculations starting with the two structures solved at 150 and 300 K (after geometry optimisation of atomic positions, but not unit cell parameters). A comparison of GIPAW-calculated ¹H chemical shifts for isolated molecules and the full crystal structures is indicative of hydrogen bonding strength.     

Self‐assembled polyurea macromer nanodispersion and resulting hybrid polyurea‐acrylic emulsions and films

A polyurea macromer (PUM) was synthesized and dispersed in basic conditions to form self‐assembled nanoparticles (<20 nm dispersions, up to 30 wt % aq. soln.). These nanoparticles enabled surfactant‐free emulsion polymerization to form hybrid polyurea‐acrylic particles despite the absence of a measureable water‐soluble fraction. The T_g of the starting PUM material was a strong function of the PUM's extent of neutralization and hydration (varying between 100 °C and >175 °C) due to changes in hydrogen and ionic bonding. Two separate hybrid polyurea‐acrylic emulsion systems were prepared: one by direct polymerization of (meth)acrylic monomers in the presence of the nanodispersion and a second by a physical blend of PUM nanodispersion with an acrylic latex control. The direct polymerization method resulted in a hybrid emulsion particle size that developed by a mechanism resembling conventional emulsion polymerization and was unlike that described for seeded polyurethane dispersion systems. Film hardness was shown to increase with increasing coating thickness for the hybrid film prepared by direct polymerization. The resulting mechanical properties could be explained by applying mechanical models for a composite foam structure. These results were unprecedented for normal elastomer films. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2019, 57, 1373–1388     

The marinopyrroles, antibiotics of an unprecedented structure class from a marine Streptomyces sp

Cultivation of an obligate marine Streptomyces strain has furnished the marinopyrroles A and B, densely halogenated, axially chiral metabolites that contain an uncommon bispyrrole structure. X-ray analysis of marinopyrrole B showed that the natural product exists as an atropo-enantiomer with the M-configuration. Though configurationally stable at room temperature, M-(-)-marinopyrrole A can be racemized at elevated temperatures to yield the non-natural P-(+)-atropo-enantiomer. The marinopyrroles possess potent antibiotic activities against methicillin-resistant Staphylococcus aureus.     

(2E)‐N‐(2‐Iodo‐4,6‐dimethylphenyl)‐2‐methylbut‐2‐enamide

The title compound, C₁₄H₁₈INO, crystallizes as +sc/+sp/+sc 2‐iodoanilide molecules (and racemic opposites) and shows significant intermolecular I...O interactions in the solid state, forming dimeric pairs about centres of symmetry. Under asymmetric Heck conditions, the S enantiomer of the dihydroindol‐2‐one was obtained using (R)‐(+)‐2,2′‐bis(diphenylphosphino)‐1,1′‐binaphthyl [(R)‐BINAP], suggesting a mechanism that proceeds by oxidative addition to give the title (P) enantiomer of the compound and pro‐S coordination of the Re face of the alkene in a conformation similar to that defined crystallographically, except that rotation about the C—C bond of the butenyl group is required.     

A high throughput fluorescence polarization assay for inhibitors of the GoLoco motif/G-alpha interaction

The GoLoco motif is a short Galpha-binding polypeptide sequence. It is often found in proteins that regulate cell-surface receptor signaling, such as RGS12, as well as in proteins that regulate mitotic spindle orientation and force generation during cell division, such as GPSM2/LGN. Here, we describe a high throughput fluorescence polarization (FP) assay using fluorophore-labeled GoLoco motif peptides for identifying inhibitors of the GoLoco motif interaction with the G-protein alpha subunit Galpha (i1). The assay exhibits considerable stability over time and is tolerant to DMSO up to 5%. The Z'-factors for robustness of the GPSM2 and RGS12 GoLoco motif assays in a 96-well plate format were determined to be 0.81 and 0.84, respectively; the latter assay was run in a 384-well plate format and produced a Z'-factor of 0.80. To determine the screening factor window (Z-factor) of the RGS12 GoLoco motif screen using a small molecule library, the NCI Diversity Set was screened. The Z-factor was determined to be 0.66, suggesting that this FP assay would perform well when developed for 1,536-well format and scaled up to larger libraries. We then miniaturized to a 4 microL final volume a pair of FP assays utilizing fluorescein- (green) and rhodamine- (red) labeled RGS12 GoLoco motif peptides. In a fully-automated run, the Sigma-Aldrich LOPAC(1280) collection was screened three times with every library compound being tested over a range of concentrations following the quantitative high throughput screening (qHTS) paradigm; excellent assay performance was noted with average Z-factors of 0.84 and 0.66 for the green- and red-label assays, respectively.     

Evaluation of statistical control charts for on-line radiation monitoring

Statistical control charts are presented for the evaluation of time series radiation counter data from flow cells used for monitoring of low levels of ⁹⁹TcO₄⁻ in environmental solutions. Control chart methods consisted of the 3-sigma (3σ) chart, the cumulative sum (CUSUM) chart, and the exponentially weighted moving average (EWMA) chart. Each method involves a control limit based on the detector background which constitutes the detection limit. Both the CUSUM and EWMA charts are suitable to detect and estimate sample concentration requiring less solution volume than when using a 3σ control chart. Data presented here indicate that the overall accuracy and precision of the CUSUM method is the best.     

Natural linear-scaled coupled-cluster theory with local transferable triple excitations: applications to peptides

The natural linear-scaled coupled-cluster (NLSCC) method ( Flocke, N.; Bartlett, R. J. J. Chem. Phys. 2004, 121, 10935 ) is extended to include approximate triple excitations via a coupled-cluster with single, double, and triple excitation method (CCSDT-3). The triples contribution can potentially be embedded in a larger singles and doubles region. NLSCC exploits the extensivity of the CC wave function to represent it in terms of transferable natural localized molecular orbitals (NLMOs) or functional groups thereof that are obtained from small quantum mechanical (QM) regions. Both occupied and virtual NLMOs are local because they derive from the single-particle density matrix. Noncanonical triples amplitudes are avoided by applying the unitary localization matrix to the canonical CC wave function for a QM region. A generalized NLMO code interfaced to the ACES II quantum chemistry software package provides NLMOs for the relevant number of atoms in a given functional group. Applications include linear polyglycine and the pentapeptide met-enkephalin, which was chosen as a more realistic three-dimensional system with nontrivial side chains. The results show that the triples contributions are quite large for aromatic bonds suggesting an interesting active space method for triples in which different bonds require different excitation levels. The NLSCC approach recovers a very large percentage (>99%) of the CCSD or CCSDT-3 correlation energy.     

Effect of pumping methods on transmembrane pressure, fluid balance and relative recovery in microdialysis

There is a growing interest in using large pore size probes for microdialysis of macromolecular markers to monitor cell and tissue functions. Fluid balance could be an important issue when using large pore size microdialysis probes, which are affected by the mode of operation. In this study, the effect of pumping systems, push, pull, push-and-pull, and the resulting transmembrane pressure on the fluid balance, as well as, the relative recovery of small molecular nutrients and metabolites and macromolecules (proteins) were examined. The validity of the internal reference in situ calibration was examined in detail. It is concluded that a push-and-pull system is the only effective method of eliminating fluid loss or gain. The relative recovery of small solutes is not affected much by the applied pumping methods; however, the relative recovery of macromolecules is significantly influenced by them. The in situ calibration technique using Phenol Red can provide reliable results for small molecules including glucose and lactic acid. Using 10 and 70-kDa fluorescent dextrans as the internal standard for large molecules in situ calibration of similar size does not work for the pull pump system, but does work well when using a push-and-pull pumping method.     

Azodicarboxylate-Mediated Peptide Cyclisation: Application to Disulfide Bond Formation in Solution and Solid Phase

Cyclic peptides are important molecules, playing key roles in protein architecture, as chemical probes, and increasingly as crucial structural elements of clinically-useful therapeutics. Herein we report methodology using azodicarboxylates as efficient reagents for the facile synthesis of cyclic peptides through a disulfide bridge. The utility of this approach in both solution and solid-phase, and compatibility with common amino acid side chain functionalities is demonstrated, resulting in cyclic peptides in good yield and purity. This approach has significant potential application for synthesis of molecules of biological or therapeutic significance.     

Gravitational effects in quantum mechanics

To date, both quantum theory and Einstein’s theory of general relativity have passed every experimental test in their respective regimes. Nevertheless, almost since their inception, there has been debate surrounding whether they should be unified, and by now, there exists strong theoretical arguments pointing to the necessity of quantising the gravitational field. In recent years, a number of experiments have been proposed which, if successful, should give insight into features at the Planck scale. Here, we review some of the motivations, from the perspective of semi-classical arguments, to expect new physical effects at the overlap of quantum theory and general relativity. We conclude with a short introduction to some of the proposals being made to facilitate empirical verification.