Nucleosides. Part LX. Synthesis and Characterization of Monomeric Cordycepin-Vitamin and Cordycepin-Lipid Conjugates Model Substances for Biodegradable Ester and Carbonate Linkages in Conjugates and Potential Inhibitors of HIV-1 Replication

Monomeric 3′-deoxyadenosine (cordycepin) was modified at the 2′-O- ( 13–18 ) and 5′-O-position ( 25–29 ) by the vitamins E, D₂, and A and by the two lipids 1,2-di-O-palmitoylglycerol and 1,2-di-O-hexadecylglycerol via succinate or carbonate linkages. The base-labile conjugates afforded protection groups like the 2-(4-nitro-phenyl)ethoxycarbonyl (npeoc) and monomethoxytrityl group (MeOTr) that are cleavable without harming the ester and carbonate bonds, respectively. Monomeric conjugates of cordycepin and vitamin E, vitamin D₂, 1,2-di-O-palmitoylglycerol, and 1,2-di-O-hexadecylglycerol (see 13, 14, 17, 18, 25, 26, 28 , and 29 ) inhibited HIV-1-induced syncytia formation 1.7 to 6.2 fold compared to 1.5-fold for cordycepin (see Table); IC₅₀ values for 25 and 28 were 257 and 267 m?M , respectively. In addition, the monomeric cordycepin-vitamin and -lipid conjugates inhibited HIV-1 RT activity 28–49% which compares with a 13% inhibition of HIV-1 RT observed for cordycepin. The minimal inhibition of HIV-1-induced syncytia formation and HIV-1 RT activity did not proceed by the activation of RNase L. The monomeric conjugates tested ( 13, 14 ) increased PKR expression.     

Autoignition temperature: comprehensive data analysis and predictive models

ABSTRACT

Here we report a new predictive model for autoignition temperature (AIT), an important physical parameter widely used to assess potential safety hazards of combustible materials. Available structure-AIT data extracted from different sources were critically analysed. Support vector regression (SVR) models on different data subsets were built in order to identify a reliable compound set on which a realistic model could be built. This led to a selection of the dataset containing 875 compounds annotated with AIT values. The thereupon-based SVR model performs reasonably well in cross-validation with the determination coefficient r ² = 0.77 and mean absolute error MAE = 37.8°C. External validation on 20 industrial compounds missing in the training set confirmed its good predictive power (MAE = 28.7°C).     

Diffusion of cationic polyelectrolytes into cellulosic fibers

The penetration of cationic polyelectrolytes into anionic cellulosic fibers was evaluated with fluorescent imaging techniques in order to clarify the mechanism and time scales for the diffusion process. The bulk charge of the cellulosic fibers indirectly creates a driving force for diffusion into the porous fiber wall, which is entropic in nature due to a release of counterions as the polyelectrolyte adsorbs. The individual bulk charges in the fiber cell wall also interact with the diffusing polyelectrolyte, such that the polyelectrolyte diffuses to the first available charge and consequently adsorbs and remains fixed. Thus, subsequent polyelectrolyte chains must first diffuse through the adsorbed polyelectrolyte layer before adsorbing to the next available bulk charges. This behavior differs from earlier suggested diffusion mechanisms, by which polyelectrolytes were assumed to first adsorb to the outermost surface and then reptate into the pore structure. The time scales for polyelectrolyte diffusion were highly dependent on the flexibility of the chain, which was estimated from calculations of the persistence length. The persistence length ultimately depended on the charge density and electrolyte concentration. The charge density of the polyelectrolyte had a greater influence on the time scales for diffusion. High charge density polyelectrolytes were observed to diffuse on a time scale of months, whereas the diffusion of low charge density polyelectrolytes was measured on the order of hours. An influence of the chain length, that is, steric interactions due the persistence length of the polyelectrolyte and to the tortuosity of the porous structure of the fiber wall, could only be noted for low charge density polyelectrolytes. Increasing the electrolyte concentration increased the chain flexibility by screening the electrostatic contribution to the persistence length, in turn inducing a faster diffusion process. However, a significant change in the diffusion behavior was observed at high electrolyte concentrations, at which the interaction between the polyelectrolyte charges and the fiber charges was almost completely screened.     

Kinetics and mechanism of the oxidation of sulfite by chlorine dioxide in a slightly acidic medium

The sulfite-chlorine dioxide reaction was studied by stopped-flow method at I = 0.5 M and at 25.0 +/- 0.1 degrees C in a slightly acidic medium. The stoichiometry was found to be 2 SO(3)(2-) + 2.ClO(2) + H(2)O --> 2SO(4)(2) (-) + Cl(-) + ClO(3)(-) + 2H(+) in *ClO(2) excess and 6SO(3)(2-) + 2*ClO(2) --> S(2)O(6)(2-) + 4SO(4)(2-) + 2Cl(-) in total sulfite excess ([S(IV)] = [H(2)SO(3)] + [HSO(3)(-)] + [SO(3)(2-)]). A nine-step model with four fitted kinetic parameters is suggested in which the proposed adduct *SO(3)ClO(2)(2-) plays a significant role. The pH-dependence of the kinetic traces indicates that SO(3)(2-) reacts much faster with *ClO(2) than HSO(3)(-) does.     

Quasi-isotropic analysis of anisotropic thin films on optical waveguides

Thin films assembled on a substrate are often anisotropic. Nevertheless, because of experimental limitations, sufficient parameters to characterize the anisotropy, even in the simplest (and perhaps most common) case of uniaxial thin films, which are birefringent, are not usually available. This paper examines the consequences of treating them as isotropic thin films, with particular reference to their characterization via perturbation of the propagation constants (effective refractive indices) of optical waveguides. It is shown that the refractive index and geometrical thickness of a thin film thus calculated are often unrealistic (especially when the thin film is positively birefringent), but the mass per unit area may be quite precise, depending on the sign and magnitude of the birefringence.     

Vibrational spectroscopy of formamide-intercalated kaolinites

The vibrational spectroscopy of low and high defect kaolinites fully and partially intercalated with formamide have been determined using a combination of X-ray diffraction, DRIFT and Raman spectroscopy. Expansion of the high defect kaolinite to 10.09 A resulted in a decrease in the peak width of the d(001) peak attributed to a decrease in defect structures upon intercalation. Changes in the defect structures of the low defect kaolinite were observed. Additional infrared bands were observed for the formamide intercalated kaolinites at 3629 and 3606 cm(-1). The 3629 cm(-1) band is attributed to the hydroxyl stretching frequency of the inner surface hydroxyl group hydrogen bonded to the carboxyl group of the formamide. The 3606 cm(-1) band is ascribed to water in the interlayer. Concomitant changes are observed in both the hydroxyl deformation modes and in the carboxyl bands.     

Peak-type and dip-type metal-clad waveguide sensing

Two types of operation for metal-clad waveguide sensors, peak-type and dip-type operation, are described. The newly discovered peak-type operation [Sens. Actuators B 94, 304 (2003)] can be achieved by use of a few-nanometers-thick cladding of a metal with a large imaginary permittivity, whereas conventional dip-type operation is obtained with a metal cladding with small imaginary permittivity some tens of nanometers thick. Both types of operation are described, and the main differences are illustrated.     

Interference of Data Transmission in Access and Backbone Networks by High-Power Sensor System

Currently, individual optical fibers are mostly used for each non-data application, which is very inefficient and uneconomical. Sharing a single fiber for multiple applications is a promising solution. However, in the case of a non-data application, the situation is much more complicated compared to data because of special application´s requirements. In laboratory setup, we performed a measurement with a standard G.652D optical fiber for analyzing possible interaction of stable frequency/accurate time transmission, 1.25/10Gbps data transmission (typical bitrates for access point-to-point networks), and high-power sensor signal for different channel spacing and different pulse duration of sensor signal.